Ralstonia solanacearum PSI07: RPSI07_2998
Help
Entry
RPSI07_2998 CDS
T01273
Symbol
rpoN
Name
(GenBank) sigma N (sigma 54) factor of RNA polymerase
KO
K03092
RNA polymerase sigma-54 factor
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl02020
Two-component system
rsl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RPSI07_2998 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RPSI07_2998 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsl03021
]
RPSI07_2998 (rpoN)
Transcription machinery [BR:
rsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RPSI07_2998 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
DUF2344
HTH_IclR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CBJ52354
LinkDB
All DBs
Position
3134201..3135700
Genome browser
AA seq
499 aa
AA seq
DB search
MKQSLQLRLSQHLALTPQLQQSIRLLQLSTIELQQEVEQALTENPLLERENEWLDTSARI
GVDGSVSALQSSSATPPPTESPPPAANGADHADTAEASYENGSDFDSDYGADRSDWSLDD
FARKPQSDEDDRAPMQLREAEPTLREFLMEQLAPLKLSLRDKGLVIFLIESLDDEGYLTG
SLDEILADLPAELEAELDELQAALRMLQSFDPAGIGARSAAECLTLQLQRLDSPAKPLAL
AIVNQHLELLAARDYTRLKKALSVDEGALKAAHELIRSLAPFPGHAFGRAEADFVVPDVV
VRKTAAGWMAQLNPDVMPRLRINDMYAQILRSSRGESGSANLQQKLQEARWLIKNIQQRF
DTILRVSQAIVERQKSFFTHGEIAMRPLVLREIADTLGLHESTISRVTTNKYMATPLGTF
ELKYFFGSHVSTETGGAASSTAIRALIKQLVGAEDPKNPLSDSRIAELLGEQGFVVARRT
VAKYREALKIPAVNLRKSL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtcgctccagctccgtctctctcagcatctggcgctcacgccgcaactgcag
cagtcgatccggctgctgcagctgtcgaccatcgaactgcaacaggaagtcgagcaggcg
ctgactgagaacccgctgcttgagcgcgagaacgagtggctcgacacctcagcgcgcatc
ggcgtcgacggctcggtcagtgccctgcagagcagcagcgccaccccgccgccgaccgaa
tcgccgccgcccgccgccaacggcgcggaccacgccgacactgccgaggcatcgtacgaa
aacggcagcgatttcgacagcgactatggcgccgatcgttccgactggagcctcgacgac
ttcgcacgcaaaccgcagtccgacgaagacgaccgcgccccgatgcagctgcgcgaggcc
gaacccacgctgcgcgaattcctgatggaacagctggcgccgctcaagctgtccctgcgc
gacaaaggcctcgtcatcttcctgatcgaatcgctggacgacgaaggctacctgaccggc
tcgctcgatgagatcctcgccgacctgccggccgaactcgaggccgaactcgacgaactg
caagccgcgctgcgcatgctgcagagcttcgatccggccggcatcggcgcgcgctcggcg
gcggaatgcctgacgttgcagctgcagcgcctggactcgccggccaagccgctggcgctg
gccatcgtcaaccagcatctcgaactgctcgccgcgcgcgactacacgcgtctgaagaaa
gcgctgtccgtcgatgaaggcgcgctgaaggccgcgcatgaactgatccgctcgctggcc
ccgttccctggccacgccttcgggcgtgccgaggccgactttgtcgtgcccgacgtggtg
gtgcgtaaaactgccgcaggctggatggcgcagttgaaccccgacgtgatgccgcgcctg
cgcatcaacgacatgtacgcgcagatcctgcgcagcagccgaggcgaatcgggctccgcc
aacctgcagcagaagctgcaggaagcacgctggctgatcaagaacatccaacagcgcttc
gacaccatcctgcgtgtctcgcaagcgattgtcgaacgtcaaaagagctttttcacgcac
ggcgaaatcgccatgcgccccttggttttgcgggaaatagccgatacactgggtctacac
gagtccacgatctcccgtgtgacgaccaacaagtacatggcgacccccctggggaccttc
gagctgaagtacttcttcggcagccatgtatcgacggaaaccggcggggccgcgtcatcc
actgcgatacgcgcgctcatcaagcaacttgtaggagccgaagacccgaagaatcctctg
tccgatagcagaattgccgagctgttaggcgaacaaggattcgtggtggcccgtcggacg
gtggccaagtaccgcgaagccctcaaaatccctgcagtgaatttgcgcaagtctttatag
DBGET
integrated database retrieval system
