Ralstonia pseudosolanacearum GMI1000: RSc1418
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Entry
RSc1418 CDS
T00071
Symbol
rnhB
Name
(GenBank) probable ribonuclease hII (rnase hII) protein
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSc1418 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rso03032
]
RSc1418 (rnhB)
Enzymes [BR:
rso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
RSc1418 (rnhB)
DNA replication proteins [BR:
rso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
RSc1418 (rnhB)
Elongation factors (archaeal)
RSc1418 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
HDPD
Motif
Other DBs
NCBI-ProteinID:
CAD15120
UniProt:
Q8XZH7
LinkDB
All DBs
Position
1518122..1518832
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AA seq
236 aa
AA seq
DB search
MTADSTEIPQLALPLSQSPAAGKRARRILCGVDEAGRGPLAGPVTAAAVVLNPRKPIQGL
ADSKVLTAKKREALYDEIVEKALAWHVAEATVEEIDRINILHATMLAMQRAVQGVAAQGV
LPDLVQVDGNRCPQVAFAVEAIVKGDALVPAISAASILAKVTRDRQLAALHIAFPQYGFD
VHAGYGTPQHLAAIERHGVTPHHRRSFAPVRRALDGAPPPAGDAVPQTDAKTAWAD
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgattccaccgagattccgcaactcgcgctcccgctgtcgcagtcgccggcg
gcgggcaagcgcgcgcgccgcatcctgtgcggcgtcgacgaggccgggcgcgggccgctg
gcggggccggtgacggctgccgccgtggtgctcaatccgcgcaagccgatccaggggctg
gccgactccaaggtgctgaccgccaaaaagcgtgaggcgctgtacgacgagatcgtcgag
aaggcgctcgcgtggcatgtggccgaagccaccgtcgaggagatcgatcgcatcaacatc
ctgcatgcgaccatgctggcgatgcagcgcgccgtgcagggcgtcgccgcgcaaggggtg
ctgcccgacctggtgcaggtggacggcaaccgttgtccgcaggtggcgttcgcggtggag
gccatcgtcaagggcgatgccctggtgccggccatctcggccgcatcgatcctggccaag
gtgacgcgcgaccgccaactggcggccctgcacatcgcatttccgcagtacggcttcgac
gtacacgccggctacggcacgccgcagcacctggccgccatcgagcggcacggcgtgacg
ccgcatcatcgccgctcgttcgcccccgtgcgccgcgcgctggacggtgcgccgcccccg
gccggcgacgccgtgccgcagaccgacgccaagacggcgtgggccgactga
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