Cereibacter sphaeroides ATCC 17025: Rsph17025_2542
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Entry
Rsph17025_2542 CDS
T00512
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rsq
Cereibacter sphaeroides ATCC 17025
Pathway
rsq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Rsph17025_2542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsq03021
]
Rsph17025_2542
03400 DNA repair and recombination proteins [BR:
rsq03400
]
Rsph17025_2542
Enzymes [BR:
rsq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Rsph17025_2542
Transcription machinery [BR:
rsq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Rsph17025_2542
DNA repair and recombination proteins [BR:
rsq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Rsph17025_2542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ABP71430
UniProt:
A4WVL6
LinkDB
All DBs
Position
complement(2583476..2587609)
Genome browser
AA seq
1377 aa
AA seq
DB search
MAQSYVGQKRIRRYYGKIREVLEMPNLIEVQKSSYDLFLKSGEGPKAADGEGIQGVFQSV
FPIKDFNETAVLEFVKYELEKPKYDVDECQQRDMTYAAPLKVTLRLIVFDVDETTGARSV
KDIKEQDVYMGDMPLMTANGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAC
RIIPYRGSWLDFEFDAKDIVFARIDRRRKLPVTTLLYALGMDQEGIMDAYYDTVDFKYQK
NRGWVTRFFPERVRGTRPTYDLVDAATGEVILKAGEKATPRMVKKWIDDAQITELLVPFD
HIVGRYVARDIINEETGEIWVEAGDELTMEYDRDGEVKGGTLKLLLDQGITDIPVLDIDN
VNVGPYIRNTMAADKNMGRDTALMDIYRVMRPGEPPTVEAAAALFDTLFFDSERYDLSAV
GRVKMNMRLDLGKPDTQRTLDRDDIIACIKALTELRDGKGEIDDIDHLGNRRVRSVGELM
ENQYRVGLLRMERAIKERMSSVEIDTIMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNP
LSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGQNIGLINSLATFAR
VNKYGFIETPYRKVIEGQVTDDVVYMSATEEMRHTVAQANATLDEEGRFVSDLISSRKAG
EFMLNPPDAIDLIDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLQSDAPFV
GTGIEAVVARDSGAAIMARRAGVIDQVDATRIVVRATEMLEPGEPGVDIYRLRKFKRSNQ
SSCINQRPLVKVGDVVHRGEVVADGPCTDMGELALGRNVVVAFMPWNGYNYEDSILISER
ILRDDVYTSIHIEEYEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGAEVQPGD
ILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGAYGTIVEVRVFNRHGVDK
DERALQIEREEVERLARDRDDELAILERNIYSRLKTLIMGKVAVKGPKGIKAGSEINDEL
LSTLSRGQWWQLALGEEADAKEVEALHEQFEAQKRALDHRFEDKVEKVRRGDDLPPGVMK
MVKVFVAVKRKLQPGDKMAGRHGNKGVISKVVPIEDMPFLADGTHVDLVLNPLGVPSRMN
VGQILETHMGWAARGLGIQIDEALQDYRRSGDLTPVKEAMRLAYGDETYEGAFADRDDED
LVEMASRVTKGVPIATPVFDGAKEPDVNDALRRAGFDQSGQSIVFDGRTGEQFARPVTVG
VKYMLKLHHLVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAAYTLQ
EMLTVKSDDVAGRTKMYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDADEE
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagctacgttggccagaaacgtatccgcaggtactacggcaagatccgcgaa
gtgctggagatgccgaacctgatcgaggttcagaaatcctcctacgatctgttcctgaag
tccggcgagggcccgaaggcggccgatggcgaaggcatccagggtgtcttccagtcggtc
ttcccgatcaaggacttcaacgagaccgccgtgctcgagttcgtgaaatacgagctggag
aagccgaagtacgacgtggacgagtgccagcagcgcgacatgacctatgccgcgccgctg
aaggtgaccctgcgtctgatcgtgttcgatgtggacgagaccacgggcgcccgctcggtc
aaggacatcaaggagcaggacgtctacatgggtgacatgcccctgatgaccgcgaacggc
acgttcatcgtgaacggcaccgagcgcgtgatcgtcagccagatgcaccgttccccgggg
gtgttcttcgaccatgacaagggcaagacccattcctcgggcaagctgctctttgcctgc
cggatcattccctaccgcggctcgtggctcgacttcgagttcgacgccaaggacatcgtc
ttcgcccggatcgaccgccgccggaagctgccggtgacgacgctgctctatgccctcggc
atggatcaggaaggcatcatggatgcctactacgacacggtggacttcaagtatcagaag
aaccgcggctgggtcacgcgcttcttccccgagcgggtgcgcggcacccgcccgacctat
gatctggtcgatgcggccaccggcgaggtcatcctgaaggcgggcgagaaggccacgccg
cggatggtcaagaagtggatcgacgacgcccagatcaccgagcttctggtgccgttcgac
catatcgtcggccgctatgtcgcccgcgacatcatcaatgaggaaaccggcgagatctgg
gtcgaagccggcgacgaactcacgatggagtatgaccgcgacggcgaggtgaagggcggg
acgctgaagctcttgctcgaccagggcatcaccgacattccggtgctcgacatcgacaac
gtgaacgtcggcccctacatccgcaacaccatggcggcggacaagaacatgggccgcgac
accgcgctcatggacatctaccgcgtgatgcgtccgggcgagccgccgaccgtcgaggcc
gcggcggcgctgttcgacacgctgttcttcgacagcgagcgctatgacctgtcggccgtc
ggccgcgtgaagatgaacatgcgtctggatctcggcaagcccgacacccagcgcacgctc
gaccgcgacgacatcatcgcctgcatcaaggcgctgaccgaactgcgcgacggcaagggt
gagatcgacgacatcgaccacctcggcaaccgccgggtgcgctcggtcggcgagctgatg
gagaaccagtatcgcgtgggtctcctgcggatggagcgggcgatcaaggagcgcatgtcc
tcggtcgagatcgacacgatcatgccgcaggacctgatcaacgccaagccggccgcggcc
gcggtgcgcgagttcttcggctcgtcgcagctgtcgcagttcatggaccagaccaacccg
ctgtcggaagtcacccacaagcggcgtctctcggccctcgggccgggcggtctgacccgt
gagcgtgcgggcttcgaggtgcgcgacgttcacccgacccactacggccgaatgtgcccg
atcgagacgccggaaggccagaacatcggtctgatcaactcgctcgcgaccttcgcccgc
gtgaacaagtacggcttcatcgagaccccctaccgcaaggtgatcgaggggcaggtgacc
gacgacgtggtctacatgtcggcgaccgaagagatgcgccacaccgtggcgcaggccaac
gcgacgctcgacgaggaaggccgattcgtctcggacctgatctcgtcgcgcaaggcgggc
gagttcatgctgaacccgccggatgccatcgacctgatcgacgtgtcgccgaagcagctc
gtgtcggtcgcggcctcgctgatcccgttcctcgagaacgacgacgcgaaccgcgctctg
atgggctcgaacatgcagcgtcaggccgtgccgctcctgcaatccgacgcgcccttcgtg
ggcacggggatcgaggccgtggtggcgcgtgactcgggcgccgccatcatggcgcgccgc
gccggcgtgatcgaccaggtggacgcaacgcgaatcgtcgtgcgcgccaccgagatgctg
gagccgggcgagccgggtgtcgacatctaccgtctgcgcaagttcaagcgctcgaaccag
tcgtcctgcatcaaccagcgtccgctggtgaaggtgggcgacgtggtgcaccgcggcgag
gtggtggccgacggtccctgcaccgacatgggcgaactcgcccttggtcggaacgtggtc
gtggccttcatgccgtggaacggctacaactacgaggactcgatcctgatctccgagcgc
atcctgcgcgatgacgtctacacctcgatccacatcgaggaatacgaggtcgccgcccgt
gacaccaagctcgggccggaagagatcacccgcgacattccgaacgtcggcgaggaagcc
ctgcgcaacctcgacgaggcgggcatcgtctatatcggcgccgaagtgcagccgggcgac
atcctcgtgggcaagatcacgccgaagggcgaaagcccgatgacgcccgaggaaaagctc
ctccgcgccatcttcggcgagaaggcgtcggacgtgcgggatacctcgctgcgcctgccg
ccgggggcttacggcaccatcgtggaagtgcgggtcttcaaccgccacggcgtcgacaag
gacgagcgtgcgttgcagatcgagcgcgaagaggtcgaacgcctcgcccgcgaccgggac
gacgagctggcgatcctcgagcgcaacatctattcgcgcctcaagacgctgatcatgggc
aaggtcgccgtgaagggcccgaagggcatcaaggcgggctccgagatcaacgacgagctg
ctgtccacgctctcgcgcgggcagtggtggcagctggcgctgggtgaggaagccgacgcg
aaggaagtcgaggccctccacgagcagttcgaggcgcagaaacgcgcgctcgatcaccgc
ttcgaggacaaggtcgagaaggtccgccgcggcgacgacctgcctccgggcgtgatgaag
atggtcaaggtgttcgtcgcggtgaagcgcaagctgcagccgggcgacaagatggccggc
cgtcacggcaacaagggcgtcatctcgaaggtggtgccgatcgaggacatgccgttcctt
gcggacggcacgcatgtcgacctcgtgctcaacccgctgggcgtgccctcgcggatgaac
gtgggtcagatcctcgagacgcacatgggctgggccgcgcgcggtctgggcatccagatc
gacgaggcgctgcaggactaccgccgctcgggcgacctgaccccggtcaaggaagccatg
cggctcgcctatggcgacgagacttatgaaggggccttcgccgaccgcgatgacgaggat
ctggtggagatggccagccgcgtcaccaagggcgtgccgatcgcgaccccggtcttcgac
ggtgcgaaggagccggacgtcaacgacgccctgcgccgcgcgggcttcgaccagagcggg
cagtccatcgtcttcgacggccggacgggcgagcagttcgcgcgtcccgtcaccgtgggc
gtcaagtacatgctgaagctgcaccacctggtcgatgacaagctgcacgcgcgctcgacc
ggtccgtactcgctcgtcacccagcagccgctgggcggcaaggcgcagttcggtggccag
cgtctgggcgagatggaggtctgggcgctcgaagcctacggcgccgcctacaccctgcag
gagatgctgacggtgaagtcggacgacgtggcgggccgcacgaagatgtacgagtcgatc
gtcaagggcgaggacaacttcgaggcgggcgtcccggagtcgttcaacgtgctcgtcaag
gaagtgcggggcctcggcctcaacatggaactcctggatgcggacgaggaataa
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integrated database retrieval system
