Rhodovulum sulfidophilum: NHU_04042
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Entry
NHU_04042 CDS
T04143
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethylmodification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
rsu
Rhodovulum sulfidophilum
Brite
KEGG Orthology (KO) [BR:
rsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsu03016
]
NHU_04042 (gidA)
03036 Chromosome and associated proteins [BR:
rsu03036
]
NHU_04042 (gidA)
Transfer RNA biogenesis [BR:
rsu03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NHU_04042 (gidA)
Prokaryotic type
NHU_04042 (gidA)
Chromosome and associated proteins [BR:
rsu03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NHU_04042 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
FAD_binding_2
DAO
Pyr_redox
AlaDh_PNT_C
HI0933_like
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
BAQ71165
UniProt:
A0A0D6B8N6
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All DBs
Position
complement(4164252..4166117)
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AA seq
621 aa
AA seq
DB search
MKHRAFDVIVVGGGHAGAEAAHASARLGARTALVTLRLDGIGVMSCNPAIGGLGKGHLVR
EVDALDGVMGRAADRAGIQFRLLNRRKGPAVQGPRAQADRKLYRQAVQTALSAVPGLEIV
EGEAADFLQRDGRIAGVVLADGSELSAGAVVLTTGTFLRGVIHIGDRQSPGGRIGDRPSV
RLAGRIDGFGLPLGRLKTGTPPRLDGRTIDWDRLDRQPGDDEPVLFSFLSSHGVARQIAC
GITHTNVQTHDIIRKNLSRSAMYGGHIEGVGPRYCPSIEDKVVRFAEKGSHQIFLEPEGL
DDPTVYPNGISTSLPEEVQEAYVHSIKGLENATILQPGYAIEYDYVDPRALRPTLELRDV
PGLFLAGQINGTTGYEEAAAQGLVAGLNAARDVAGQGPVIFSRTTSYIGVMIDDLITRGV
SEPYRMFTSRAEFRLSLRADNADQRLTPLGLEIGCVGDRRRTSFESKMERLSAGRARLES
MSVTPKQVAAAGIKVNADGTRRSGIDLLAFPDVVFEDLIPLDPALEEVDRESRVQLARDA
LYANYIARQTLDVEAMRRDEAQRIPSGFDYEKLEGLSAELKGKLSRVQPETLGQAARIDG
MTPAAATLILARLRQMERQSA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacatcgcgcttttgatgtcatcgtcgtcggcggtggccatgccggtgccgaagcg
gcccatgcttccgcgcgtcttggcgcgaggacagctctggtcacgctgcgtctggacggg
atcggcgtcatgtcctgcaatccggcgattggcggactcggaaaaggccatctcgtgcgg
gaagtcgatgccctcgatggggtcatgggtcgggccgctgaccgcgctgggatccagttt
cgccttttgaaccggcgtaagggccccgccgtacaggggccgcgggcccaggctgaccgg
aagctctatcgccaggcagtgcaaacagctctgagcgccgtaccggggcttgagatcgtc
gagggagaagcggctgattttcttcagcgcgacggtcgcattgcaggcgtagtactggcc
gatgggagtgaattgtcggccggggccgtggttctgaccacgggcaccttcctacgcggc
gtcatccatattggggaccggcaaagcccgggcggacgaattggagaccgtccgtcggtt
cgtcttgccgggaggatcgatggattcggtctgccgctggggcgcctgaagacggggacg
ccgccgcgtcttgacggtcgaaccattgactgggatcgtctcgatcggcagccaggcgat
gacgaaccggtgttgttctcgttcctctcgtcgcatggagtggcgcgtcagattgcctgc
ggcatcacccatacgaatgtgcaaacccatgatataattcgtaaaaacctgtctcgttcg
gcaatgtatggtggccatatagaaggagtcggaccgcgctattgcccctctatcgaagat
aaggtcgtccgattcgccgagaaggggtcgcaccagatttttctggagcccgaaggtctc
gacgatccgacagtctatccgaacggaatttcgacctctttgcccgaagaggtgcaggag
gcgtatgtccactcgatcaaagggctggagaacgcgaccatccttcaaccgggttacgcc
atcgaatatgattacgtcgatccgcgcgcgctgcgcccgaccctcgagctgcgcgatgta
cccgggctgttcctggccggacagatcaacggtacgaccggatatgaagaagcggcggcg
caaggtctggtcgcagggctgaatgcggcgcgggacgtggcggggcaggggccggtgatc
ttcagccggaccacgagctatattggcgtgatgatcgacgacctgatcacgcgcggggtc
agcgagccttatcgcatgttcacctcgcgcgccgaattccgcctgtctcttcgggcggat
aatgccgatcagcggctgacgccgctcgggctcgagatcggctgcgtcggagatcggcgt
cgaacgtctttcgagtcaaagatggagcgtctttcggcggggcgcgcgcggctggagtcc
atgtcggtgacgccgaaacaggtggccgcggccgggatcaaggttaatgccgatgggacc
cgccgctcgggtatcgaccttctcgccttccctgatgtggtctttgaagacctgatcccg
ctcgatcccgcgcttgaggaagtggaccgcgagagccgggttcaattggcacgagacgca
ttatatgcgaattatatcgcccgccaaacactagatgtagaggctatgcggcgggatgag
gcgcaacgcattccgtccggttttgactatgagaagctcgaaggcctctctgccgaactg
aagggcaagctctccagggtgcagccggaaaccctggggcaggccgcgcgcatcgacgga
atgacacctgctgcggcgaccttgatccttgcgcgcctgcgccagatggagcggcagtcg
gcatga
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