KEGG   Ruania suaedae: LQF12_07540
Entry
LQF12_07540       CDS       T08275                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rsua  Ruania suaedae
Pathway
rsua03030  DNA replication
rsua03410  Base excision repair
rsua03420  Nucleotide excision repair
rsua03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rsua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LQF12_07540 (polA)
   03410 Base excision repair
    LQF12_07540 (polA)
   03420 Nucleotide excision repair
    LQF12_07540 (polA)
   03440 Homologous recombination
    LQF12_07540 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsua03032]
    LQF12_07540 (polA)
   03400 DNA repair and recombination proteins [BR:rsua03400]
    LQF12_07540 (polA)
Enzymes [BR:rsua01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LQF12_07540 (polA)
DNA replication proteins [BR:rsua03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LQF12_07540 (polA)
DNA repair and recombination proteins [BR:rsua03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LQF12_07540 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LQF12_07540 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f HHH
Other DBs
NCBI-ProteinID: UFU04415
LinkDB
Position
1629897..1632599
AA seq 900 aa
MRPRLSGVSDTARPRLLLIDGHSMAYRAFFALPAENFSTSTGQTTNAVYGFTSMLINLLR
DEDPTHVAVAFDVSSQTFRKETYAEYKGTREETPQEFRGQIPLIEEVLAALDVTTLGREG
FEADDILATLATQASAAGYEVLICSGDRDTYQLVNPGVTVLYPRKGVSDLVRMTPTAVEE
KYGVRPDQYSDLAALVGESSDNLPGVPGVGPKTAAKWILAHGGLEGIVAQAPALTGKAGQ
SLRDHLDQVLLNRQLNELLRDMELPVGPDDLARRPFERERVHQVFDALEFRVLRDRLFEM
DPQDTESATAAAFDLSITPLQPGALGDWLDERRGDRLGVDVRGSVSEGSGDAWGMAIAAP
GGDVLTLDLTDLAPQDEVALASWLTDEASEKVLHDAKTAWHALDGRGLALAGVTFDTATA
AYLCHPDQRSYALSDLTLRFLGRELKAGDEAEGSGQQMLILDGPDEAELSAVRAAAAAEL
AQVLTEQLQERASVALLSDLELPVAGVLAGMEKVGIAADEPYLRDLERQFDEHVRAAAAQ
AYEVIGREVNLSSPKQLQEVLFTELEMPKTRKTKTGYTTDAEALADLYTKTEHPFLEHLL
THRDQIRLRQTVEGLLRTVAADGRIHTTYSQTIAATGRLSSSDPNLQNIPIRTEEGHRIR
AAFVVGGGYESLLTADYSQIEMRIMAHLSEDAGLIEAFRSGEDLHSFVGSRVFDVEPAQV
TATMRSKIKAMSYGLAYGLSAFGLSRQLTIPTAEAKELMEEYFQRFGGVRDYLGSVVDQA
RVQGYTQTILGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADLIKVAMIGVQRQFSE
RRLRSRMLLQVHDELVVEVAPGEAAEAESILREQMAAAADLTVPLEVSVGTGANWRDAGH
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgcgtcctaggctgtcaggtgtgagtgacactgcgcgaccccgcctcctgctcatcgac
ggacactcgatggcctaccgtgccttcttcgcccttccggcggagaacttctccacctcc
acgggccagaccacgaatgccgtgtacggcttcacctcgatgctgatcaacctgctgcgg
gacgaagaccccacgcacgtggccgtggccttcgacgtctccagccagacgttccgcaag
gagacctacgccgagtacaagggcacgcgggaggagaccccgcaggagttccgtgggcag
attccgctcatcgaggaggtgctcgcggcgctggacgtgaccacgctgggtcgcgagggc
ttcgaggcggacgacatcctcgccacgctggcgacgcaggcctccgccgccggctacgag
gtgctgatctgttccggcgaccgggacacctatcagctcgtcaaccctggcgtcaccgtg
ctctacccccgcaagggcgtctcggatctggtgcgcatgacgcccacggccgtggaggag
aagtacggtgtccggcccgaccagtacagcgatctcgcggcgctggtgggggagagcagc
gacaacctgcccggcgtgccgggcgtgggtccgaagacggccgcgaagtggatcctcgcc
cacggcggtctcgaggggatcgtcgcccaggcgccggccctgacgggcaaagccggccag
tcgctgcgcgaccacctcgaccaggtgctgctcaaccgtcagctgaacgagctcctgcgg
gacatggagctgccggtcggtccggacgatctcgcccgccggccgttcgagcgcgagcgg
gtgcaccaggtcttcgacgcgctcgagttccgggtactacgggaccggctgttcgagatg
gacccgcaggacaccgagtccgccaccgcggcggccttcgatctctcgatcacgcccctg
caaccgggtgcgctcggcgactggctggacgagcgccgcggtgatcgactgggcgtggac
gtacggggcagcgtgagtgagggctccggtgacgcctgggggatggcgatcgcggcgccc
ggcggcgatgtgctgaccctggacctcaccgacctcgcgccccaggacgaggtcgcgctg
gcctcctggctcacggacgaggccagcgagaaggtcctgcacgacgccaagaccgcctgg
cacgcgttggacggacgcggtctcgcgctggccggcgtcaccttcgacacggcgaccgcc
gcgtacctgtgccaccccgaccagcgctcgtacgccctgtccgacctcaccctgcgcttc
ctcggacgcgagctcaaggccggggacgaggccgaggggtcggggcagcagatgctgatc
ctggacggccccgacgaagccgagctctccgccgtccgggcggccgccgcggccgagctg
gcgcaggtgctgaccgagcagctccaggagcgcgcgtcggtggccctcctgagcgatctc
gagcttcccgtcgccggcgtcctggcgggcatggagaaggtggggatcgccgcggacgag
ccgtacctgcgcgacctcgagcggcagttcgacgagcacgtgcgggcagcggcggcccag
gcctacgaggtgatcgggcgggaggtgaacctcagctcgcccaagcagctgcaggaggtg
ctcttcaccgagctggagatgccgaagacccgcaagacgaagacgggctacaccaccgac
gccgaggcgctcgccgacctctacaccaagaccgagcaccccttcctggagcatctgctc
acccaccgcgaccagatcaggctgcgtcagacggtcgagggcctgctgcggaccgtggcc
gcggacgggcggatccacaccacgtactcccagacgatcgcggccacggggcgcctgtcc
tcctccgaccccaacctgcagaacatcccgatccgcaccgaggaagggcaccgcatccgg
gccgccttcgtggtcggcggtgggtacgagtcgctcctgacggccgactactcccagatc
gagatgcggatcatggcccacctctccgaggacgcgggcctgatcgaggcattccgctcg
ggggaggacctgcactccttcgtgggttcgcgcgtcttcgacgtggagccggcccaggtc
accgcgaccatgcgctcgaagatcaaggcgatgtcctacggcctggcctacgggctgagc
gccttcggcctctcccggcagctgacgatccccaccgcggaggccaaggaactgatggag
gagtacttccagcggttcggcggcgtccgcgactacctgggctccgtggtcgaccaggcg
cgggtgcagggatacacccagaccatcctcgggcgccggcgctacctgcccgacctgacc
agtgacaaccgtcagcggcgcgagatggccgagcggatggcgttgaacgctccgatccag
ggcagcgccgccgacctcatcaaggtcgccatgatcggggtgcaacgccagttctccgag
cggcggctgcgatcgcggatgctgctgcaggtccacgacgagctcgtcgtcgaggtggcc
ccgggggaggcggccgaggccgagagcatcctgcgcgagcagatggctgcggccgcggac
ctgaccgtccccctggaggtcagcgtcgggaccggcgcgaactggcgcgacgccggccac
tga

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