KEGG   Rhizoctonia solani: RhiXN_03095
Entry
RhiXN_03095       CDS       T09256                                 
Name
(RefSeq) CCR4-Not complex component, Not1
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
rsx  Rhizoctonia solani
Pathway
rsx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RhiXN_03095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsx03019]
    RhiXN_03095
Messenger RNA biogenesis [BR:rsx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     RhiXN_03095
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     RhiXN_03095
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind IU_nuc_hydro CNOT1_TTP_bind Methyltransf_28 DUF3819 CNOT1_HEAT ARM_Cnot1 NOT1_connector DUF2795 ARM_TANGO6
Other DBs
NCBI-GeneID: 67025375
NCBI-ProteinID: XP_043178408
UniProt: A0A8H8NTI2
LinkDB
Position
3:join(2131542..2131664,2131726..2132505,2132552..2133022,2133080..2133277,2133327..2133604,2133664..2135335,2135406..2135636,2135688..2135840,2135894..2136253,2136307..2136606,2136663..2136910,2136961..2137539,2137588..2137702,2137752..2138367,2138417..2138697,2138751..2138762,2139348..2139429,2139483..2139661,2139720..2139894,2139939..2140074,2140122..2140501,2140552..2140573,2140630..2140745,2141100..2141176,2141224..2141364,2141422..2141532,2141582..2141741,2141799..2141863,2141916..2141974,2142028..2142322,2142376..2142513)
AA seq 2850 aa
MNEGRDRPTESLLNIVRAQISFLLSSLSDENFERFQTEIRSLCDQHGPESYVGLLRRLIG
TCYPRMGGGDGGVVQRLLVQEMQRMGRDPFLADRLKDTLERGDGEVFRTMELEKLLERVP
LRPLERLVIASVFVTSSRPDLSSSAAQIVHADLENAVLALVARPSFDTTDMSLSQAAKLL
ANLLSDPPPDAPVLDPSERVALLTAAQAKYGPDLAPVLRTVFPTLSLPPGTSLVQTLLQL
GPDITSDHETVRALLARFGITDQNPPRDAQVVEIISTLVRCAAEGKPLCDVGALVRALSS
FPTPIHWATAVLAFDRLDRPGVDTATLKLLIAILLNSPRDVPDVPHAVTGFWASWTNPLW
QLRLLDALLSLPNDTFNFVTLPGRRIVTVDDVAGASPTIKALAANVQSHTWNELMLIETL
TRLGDEGTPDVQAYVREMMDKAVKISAELVYMGLLQVSKPWNRTQQEYSSKLLTMFLNGH
PNHQLVFMRIWQIEPTYLTKAFGEYYADNALNITRILDVAQDLKILDSLLDVRPFEFALD
VAALASRREYLNLDKWLADNITTHGPEFVHAVIAFLESKVKGEIARNASGSDQPPESRTM
PLNPQTIAIFIRVLKNSGTALTPEDAEYFIEIRNQCLQLHPRLMNLTPGSDAEPGVAVVS
FSPEVEQEVENIYKEMYEDKISIDQMVQLLQQSKASSKPRDHEVFACTLHTLFDEYRFFA
RYYPARELQMTGYLFGSLIKYQLVDYIPLGIAIRYVLDAVRAPPDSNMFTFGVNALTQFK
NRLWEWKPLCHALLGIPHLQEVRPDLVDAARKGLAAEGPEPEEQEKEPDELEVVAFTALR
PDTLTESDALVEPPEDVSDKIMFIVNNLAPSNFEAKLDEMKAKFGTEHSRWFARYLVDQR
VSLEANNQGLYMRLLEGLVQEPDQEQGSGLEKAPLGRYVLHETYVRAAQLLNAEKTISSS
SERRVLKNLASWLGQLTLARNKPILHRNLSFKDLLLEGFDTDRLIVAIPFICAILEQCSR
SRIFRPPNPWLMAVLALLAEFYHFAELKLNLKFEIEVLCKALDIDLDKVEAAGILRARVS
AQGMGADSGLPDFVQEGDTFGFEQSGTTTSGGPAQQPADAVQSLGGAGGGMTAQIEAIVA
NLGAMVVVSPAVGYANHPGFKRAVQVAIEGAVREIILPVVDRSVTIASISTKELVAKDYA
LEADEIKIRKAAQQMVQNLAGSLALVTCKEPLKNNMALHMRQVLTEVGFSELMVPEQIIL
RVVSDNVDMACTAIERAAMDRAVTVIDETFAASYELRRRHSESRPNQPFWDPNMPVMHYQ
QSLPDPLRIKPTGLVNSQTRVYDDFSQPRRVEQKRVLMPRTVSYNRQDMMSGPNVNTGAP
GNFNNPSPAPSTQSQGPGPAIGIQQPQMTQAVMPERVMERFVSLINELESLFLMASAQHG
GEALQSSQEIRIYIRQVLYLAQQSTDREETALAFSQKIVQLLYKSTTPLAREVYVVILGR
LCEQSGKVAKEATDWLLYAEDDRKLNVPVTTTLLQSRLIGLREQDQQLAKLIQRDMRPIV
MEFTAKLIRECVSGDGEHAFATRADFPHSLDALSRAAQANKAPEEALRLLEEFQGVARGG
SHSSTPSRSSATYSNTQLVLLSERLAVHFDDWVRIFQRSPSSEKAFANYVMQLTNEGILK
GEDISSFFFRVCTETSVEQWTKYTTAGDYGTAYQPIDALSRLIVLMIKYNGDATDLPAKV
HYLTKILSIVVLVLAQAHESSVEFPQQKPFFRFFSSLLNDINGLEAHLPLFPLLVAICDT
FNTLQPINFPGFAFSWMTLISHRLFMPKMLSSENREGWRPYHRLLISLFRFLEPFLRNGE
LQNPTRTLFHGSLRLFMVLLHDFPEFLSEFYFSLCDVIPARCIQLRNIILSAYPPTLRLP
DPHRETQLESLSDMGPIPPVLSDFTLGLRHGDMRAALDQCLLGRGSSALVTSLKENLMTQ
PASPNATTGDHYNIQALNALVMYVGVSSVAQAKARNGSHVFVSTDPGVTLLTHLANELDT
EGIYHLLVSMVTHLRYPNAHTHWFSSLLLHMFVEVKNSRLQEVAARVLLERLMVFRPHPW
GALVTFIELLRNPRYDFWNKDFVRVAPEISMLLDRVAQSPGVDDVLALLLLLASNEAQLA
LITVTFGNTELKHAYTNVLKVYQLVLDHLERYPGDRNRFPNLKSKPKVCSGATGPLSGVP
HLAQYFHGPDGLSDISTTHPEFNVRDPSVLSEVIEESETAAEDAIIELLSESPEDSVTVV
AVGPLTNIARVWVKNPTALRRARRIVVMGGALDVPGNTSATAEFNFFADPQSAAMIMDAA
KSESINLLLAPLDITTQHGIPYTHLIHPNLLSGPLVNGSELLQTMTPLRAFTSAFLYRVR
RVTRELGIPDVFDMHDPLAVWAGLVHATLPRNAPLLEGWGVEKRDFVIECAGQYTKGMCV
VDRRGTTDETGGVRSIDGVQGVDKAKTKPALGVKVLTSTPGLGALDTGTAPLPSTVTPLH
KIIHGSIRAKGPISVAQYMQMCLSHPVEGYYMKGEPIGAQGDFVTSPEISQLFGELVGIW
LVSQWLERGMNRPIQVVELGPGRGTLMDDMLRTIESIGQTRGRVQAVHLVETSAKLREEQ
KSRLSARIPAELLHWYDRIEDVPNNADVYTLLVAHEFFDAVPIHIIKKTPGGFQEILVDI
DRTAQILSDSSPSLVNNPSLLANNSPAKPQSPGFRYVLSGQSSPLARTLGESSARFSQVP
EGHRIEVSPSSWAIVRGVGDLIGKGGGAGLVIDYGDDRAFGASFRGFHKHKLVDVFHQPG
FCDLTANVDFAYLKEALKFTCKSSSTPSLL
NT seq 8553 nt   +upstreamnt  +downstreamnt
atgaacgaagggcgggatcggccgacggagagtttgctcaatattgttcgcgcccaaata
tcattcttattgtctagcttaagcgatgagaactttgaaaggtttcaaacagagattcga
tcgttgtgtgaccagcacggacccgagtcatatgtgggacttttgagacgattgatagga
acgtgttacccgcgtatggggggtggagatgggggagtagtccaacgactgcttgtacag
gagatgcagcgtatggggcgagatccgttcttagcagacagactcaaagacactctggaa
cgcggcgatggcgaagtgttccgcaccatggagctcgagaaactgctggagagagtccct
ctgcgcccactcgaacgccttgttattgcctcggtatttgtcaccagctcccgccccgac
ttgtcctcttccgcagcccagatcgtacacgcagacttggaaaacgccgtactggcgctt
gttgctcgaccttccttcgacaccaccgacatgagtctcagccaggctgccaagttgctt
gccaatctgctctccgaccccccgcccgacgcgcccgttctcgatccatccgagcgcgtt
gccctccttactgccgcccaggccaagtacggtcctgatcttgcaccagtgttgcgcacg
gtctttccgaccctgtcgcttcctcctggcacatcgctcgtccagactctgctccagctt
gggccggatatcacctctgaccacgagaccgtaagggcactacttgcccgtttcggcatc
accgaccaaaatccacctcgcgacgctcaagttgtcgaaattatatctactctggttcgg
tgcgcagccgaggggaagcccctctgcgatgtgggcgcactcgtgcgtgccctgtccagt
tttcccactccgatccactgggctaccgccgtgcttgcgttcgatagactcgatcgcccg
ggcgtcgacaccgcaacgctcaagcttctcatcgccatcctactcaactcgcctcgcgac
gttccggacgtcccacacgctgtcaccggcttttgggcatcctggaccaacccgctctgg
caactccgtctcctcgacgcgttgctctccttgcccaacgatacatttaactttgttacg
ttgccaggtcgccggatcgttactgtcgatgacgtagccggtgctagtcccacgatcaaa
gctctcgccgccaacgtccagagccatacctggaatgagttgatgttgatcgagacgctt
acaaggcttggagacgaaggtacccctgatgttcaagcctatgttcgggagatgatggac
aaggcggtcaagattagtgcggagcttgtgtacatgggtttgctacaagtttcgaaaccc
tggaaccggacgcagcaagagtactcgtccaagcttttgaccatgtttttgaacggccac
ccgaaccaccagctagtctttatgcgcatttggcagatcgagcctacttacttgactaaa
gcctttggcgagtattatgcggacaatgcgttgaacattacaaggatattggacgttgct
caagatctcaagatcctcgattcgctcctcgatgtcaggccattcgagtttgcgcttgat
gtggccgcgttggcgtcccgccgagaatacctcaacctcgacaaatggctagcggacaat
atcactacccacggacccgagtttgtgcacgctgtgattgcgttcttggaatctaaggtt
aagggcgagattgcgcgtaatgcgagcgggagtgatcagcctcctgaaagtcggacgatg
cccctaaatccacagacgattgcaattttcattcgtgtacttaagaacagtgggacggcg
ctcacgcccgaagatgcagaatattttattgagattcgcaaccaatgtctccagcttcac
ccacgtctgatgaaccttactccagggagcgacgccgaaccaggcgtagcggttgtctcc
ttctcccccgaagtcgaacaagaagtggaaaatatttacaaggaaatgtacgaagacaag
atctcgatcgaccaaatggttcagctcctccaacaatccaaggcctcgtctaaaccgcgt
gatcatgaagtttttgcatgcaccctgcacaccctattcgacgaatatcgctttttcgca
cggtattatcccgctcgggaacttcaaatgactggatacctgttcgggtcgttgatcaaa
tatcagctcgtggattacatcccactcggaattgcgattcgatatgtcctcgacgcggtc
cgcgcaccacccgattcgaatatgttcacgtttggagtcaacgccttgacccagttcaag
aatcgattgtgggagtggaagcctctgtgccacgccctgctcggaatcccgcatttgcaa
gaagttcgcccagatctggtcgatgctgcgcgcaagggacttgcagccgaaggacccgaa
cccgaggagcaagagaaagaacccgacgaactcgaggtcgtagcgtttacagctcttcgt
ccggacacgttgaccgaatccgatgcgcttgtggagcctcccgaggacgtatcggacaag
atcatgttcatcgttaataaccttgcgccgagcaactttgaggccaagttggacgagatg
aaggccaagtttggtactgaacattccagatggtttgcgcggtacttggttgaccagcgc
gtcagtctcgaggcgaacaatcaagggctgtatatgcgtcttttggaggggctcgttcaa
gaaccagatcaagagcagggatcgggtttggaaaaggctccattggggcgatatgtgctc
cacgagacatacgttcgcgccgcccagttgctcaatgccgaaaagacgatttcgtcatct
tcggagcggagggtgctcaagaatcttgcaagctggttgggccagttgaccctagcgcgc
aacaaaccaatcttgcaccgcaacttgtctttcaaggacttgttgcttgagggattcgac
acggaccgactgattgtcgctattccttttatctgcgccatcctcgaacaatgctcccgc
tcgcgcatcttccgacctcccaacccatggcttatggctgtcctcgcgctcctcgccgaa
ttctaccactttgccgagctcaagttgaacctcaaattcgagatcgaggtcctatgcaaa
gcgctcgatatagatttagacaaggttgaagcggctggaatcctccgtgcccgcgtgtca
gcgcaaggcatgggcgccgacagcggtttgcccgactttgtccaagagggggacacattt
gggttcgagcaatcgggcacgacgacgtctggcggaccggctcaacaacccgcggacgcg
gttcagagtttgggtggagccgggggaggaatgactgcgcagatcgaggcgatcgtggct
aatttgggtgcgatggtggttgttagccctgctgtagggtatgcgaatcatccgggcttc
aagagggccgtgcaagttgctattgagggtgctgttcgggagattattttgccagttgtg
gaccgttcggtgactatcgcgtccatctcgaccaaggagcttgtggccaaggactatgcg
ctcgaggcggatgaaattaagatccgcaaggccgctcaacagatggtccaaaatctcgct
ggtagcttggccttggtgacctgcaaggagccgttgaagaataacatggcgttgcacatg
agacaggtattgaccgaggttgggtttagcgaattgatggtacccgaacaaatcattttg
cgtgtcgtgtccgataatgtggatatggcttgcacggcaattgagcgtgccgcgatggac
cgcgcagtgaccgtgatcgacgagacgtttgcggcgtcatacgaacttcgtcggaggcat
agcgagtcacgtccaaatcaaccgttctgggatccgaatatgccagtcatgcactaccag
cagagtctacccgacccgttgcgcatcaaacccactggcctcgtcaacagccaaacgcgg
gtgtacgacgacttttcgcagcctcgccgtgtggaacaaaaacgcgtgctcatgccccgt
accgtatcgtacaaccgtcaagatatgatgagcgggccgaatgttaatacaggtgcaccc
ggaaacttcaataacccttcgcccgctccttcgactcagagccagggacctggaccggcc
ataggtatccagcagccgcagatgactcaggcagtcatgcccgaacgtgtaatggagcgg
tttgtgtcattgatcaacgaactcgagtcgctcttcctcatggcctcggctcaacacggt
ggcgaagcccttcaatcaagccaagaaatccgcatatacattcgccaagttttgtacctg
gcgcagcagtcgacggatcgtgaagaaactgcgttggcattctcgcaaaagattgtgcag
ctgttgtacaagagcacgaccccgctcgcacgtgaagtctatgtggtcatccttggaaga
ttgtgcgagcaatcgggcaaggttgcaaaagaagcgaccgattggttgttgtatgctgaa
gatgatcgcaaattgaatgtgccagttacgacgacactcttgcagtctcgcttgattgga
ttgagggagcaagatcaacagctcgcaaagctcatccagcgtgacatgcgtccaatcgtg
atggaatttacggccaagctcattcgggaatgtgttagcggagatggagaacatgcattc
gcaacccgggctgatttcccgcattcccttgatgcactgtcgcgtgctgcacaggcaaac
aaggcacccgaagaggctcttcgtttgttggaagaattccaaggcgtcgcacgtggagga
tctcatagtagcaccccctcccgttcctctgcgacttattcaaacacccaactggttctg
ttgtctgaacgtctcgcagtccactttgacgattgggtccgaatcttccaacgctcccca
tcgtccgaaaaggcgttcgctaattatgtcatgcaactcaccaatgaagggatcctcaaa
ggagaagacatttcctcgttcttcttccgtgtgtgcaccgaaacaagcgtcgaacaatgg
accaagtacaccactgctggtgattatggcaccgcttaccagcccatcgatgcactgtct
cgcttgatagtgctcatgatcaagtacaatggggatgctacggacttgccagccaaggtc
cactatctcactaaaatcttgtcgatcgtcgtcttggtcctggcccaggcgcacgagtcc
tcggtcgagttcccccagcaaaagccattcttccggttcttctcgagcttgctgaatgac
attaacggcctcgaggcccatctacccctcttcccacttctcgtggccatatgcgatacc
ttcaacacccttcagcctatcaatttcccaggatttgccttttcttggatgactcttatt
tcacatagactctttatgcctaagatgctgagttccgaaaaccgcgagggatggcgccca
taccaccgtctccttatatctctattccgcttcctagagcctttcctccgaaacggcgag
ctccaaaatccgacacggacattgttccatggctccctgcgtttgttcatggtgctcttg
cacgatttccccgagttcctcagcgagttttacttttcgttgtgtgatgtgatcccagcg
cgctgcattcaactgcgtaacatcatcctcagtgcttatcctcccacgcttcgcttgcca
gatccccatcgcgagactcaactcgagtccttgtccgacatgggcccgatccccccggtc
ctatctgactttacgctcggcttgcgccacggagatatgcgcgccgccctcgaccagtgc
ttgcttggacgtggatcatcagctctagtcacctcgctcaaggagaacctgatgacccag
ccagccagcccgaacgcgaccacaggagatcactacaacatccaagcgctaaatgcgttg
gtcatgtatgttggcgtgtcttcagtcgctcaagccaaagcccgtaatgggtcgcatgta
tttgtgtcaactgatccaggagtgacgctcttgacccatctggccaacgagttggatacc
gagggtatctatcaccttctggtttcgatggtgactcatttgcgctaccccaatgcccac
acgcactggtttagctcgctcctgcttcacatgtttgtcgaagtcaaaaacagccgcctt
caagaggttgccgcgcgtgttcttctcgagcgcctcatggtcttccgtcctcatccttgg
ggtgctctcgtcacattcattgagctcttgcgtaaccctcgctatgatttctggaacaaa
gactttgtgcgcgtcgctccggaaatcagcatgctcttggatcgcgtggcacaatcgcct
ggggtagacgatgtgctggctttattattgctactggcttcgaatgaagcacaactcgca
ctaataactgtcacattcgggaacacggaattgaagcatgcgtacacaaatgtgttaaaa
gtctaccaattggtcttggatcatttggaacgttatccaggtgatcgaaacagatttcct
aacctcaagtcaaaacccaaagtgtgctctggggccactggaccgttgtcaggggtacct
catctagcacaatattttcacgggccggatggcctctcggacatctccactacacacccc
gagttcaatgtccgagatccttcagttctctccgaggtaattgaagaatctgagaccgca
gcagaagatgctatcatcgagttgttatcagaaagccccgaggatagtgttacggtggta
gccgtggggccattgaccaatatcgctcgagtctgggtcaagaatccaactgcactccgg
cgtgctaggagaattgttgtaatgggtggagcgttggatgtcccaggaaacacatcggcc
accgctgagttcaacttttttgccgatccccagtccgccgcgatgattatggatgctgcc
aagtctgaaagcatcaacctattgcttgctcctctcgatattacaacccaacacggtatt
ccatacacgcatttaattcaccccaacctactctccgggcctcttgtaaatgggtcggaa
ttactgcagacaatgactcccctgcgggcatttacgtctgccttcctctatcgtgttcga
cgtgtcactcgggaacttggtatccctgatgtgttcgatatgcatgatcccttagctgtt
tgggcaggtctggttcatgcaaccttacctcgaaatgcgccattgttagaaggttgggga
gtagagaaaagggactttgtaatcgagtgtgcagggcaatacacaaagggcatgtgcgtt
gtggatagaagaggtactacagacgaaacaggaggtgtgagatcgatagatggcgttcaa
ggggttgataaagccaagaccaagcccgctttaggtgtcaaggttctaacatctacacct
ggattgggagcacttgatacaggaaccgcacctctgccaagtacagtaacccctctacac
aagatcattcatggttcaattcgagcaaagggccccatatccgtcgcccagtatatgcaa
atgtgtctctctcaccccgttgagggctattacatgaagggcgaacctattggagcgcag
ggagacttcgttaccagcccagagataagtcagctttttggagagcttgtaggaatttgg
ttggtttctcaatggcttgaacgtggtatgaatcgacctatacaagtggtcgaattgggt
cctggaagggggacattgatggacgatatgctacggaccatcgagtctattgggcaaact
cgtggtcgagttcaagccgttcatctagttgaaacgagcgctaagttgcgagaagagcaa
aagagtagactcagcgcccgaattcctgcagaattattgcattggtacgaccggatcgaa
gatgttccaaataatgcggacgtgtacacccttcttgtcgcgcatgaattctttgatgca
gttcctattcacattatcaagaaaactccgggtggattccaggagatcttggttgatatt
gatagaacagcgcaaatattatcagattcctctccttccctagtgaataacccatctctt
ctcgcaaacaactcgcccgcaaagcctcagtcccctgggtttcgttacgtcctatcgggc
caatcgtcccctcttgcacgtactctaggcgaatcctccgccagattttctcaagttcca
gaaggacataggatcgaagtgtccccttcctcgtgggccattgtgcgtggcgttggcgat
ttgattggcaaaggcggaggagccgggttggtgattgactatggggatgatagagcgttt
ggagcttcgtttagaggattccataaacataaacttgtggacgtctttcatcaacccggt
ttttgcgacctaaccgctaacgttgactttgcgtatctaaaagaagcactcaagttcaca
tgtaagtcgtcttctactccctccctcctgtga

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