Rhizoctonia solani: RhiXN_09676
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Entry
RhiXN_09676 CDS
T09256
Name
(RefSeq) DNA-directed RNA polymerase III subunit C5
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
rsx
Rhizoctonia solani
Pathway
rsx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RhiXN_09676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsx03021
]
RhiXN_09676
Enzymes [BR:
rsx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RhiXN_09676
Transcription machinery [BR:
rsx03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
RhiXN_09676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
LKAAEAR
DUF4194
Motif
Other DBs
NCBI-GeneID:
67031955
NCBI-ProteinID:
XP_043182326
UniProt:
A0A8H8SY20
LinkDB
All DBs
Position
8:join(714616..714800,714851..715010,715071..715369,715416..716049,716102..716308,716363..716584,716636..716877,716936..716949,717007..717045,717099..717376,717425..718938,718998..719047,719099..719961,720020..720385,720434..720652)
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AA seq
1763 aa
AA seq
DB search
MDIGHPIASHVKSISFSFLNSHDIRRISVKQIVNPVLLDDLNRPNIGGLYDPALGPSERG
DVCGTCRLNSFSCPGHFGHIELPSPVYHPLFMTNMLNLLRGVCMWCHQFKMSQGEKAKYE
AKLVLLERGLLAAASDVDEFSMRPGTKSEEGAEPGETISEFRRRLGLFVKHHLKDAPTST
RNDYKDGPVYQARKDVIQSFLKAAVGCKKCAHCDGFGYTYRKDGHTRIVEYELSRKHKTL
MEVLGKVRPNVLLLERRASQSSNLSSEYTTSNRDEDGDIEMEDIEEPEPLGESTLEDAPR
DPGELPRSVSGAVKTIRGRNERVLPPEEARAHLRRLFAREAKLTTLLYGRHGPFARQAKA
ANADMFFLDVLPVPPTRFRPPARMGDSVFEHPQNELLTKVLVTAYRLRDLEAALREANKK
PTERDEVDELEAAQEGHRQKLFGQLLEALIQLQIDVNSFMDSSKNPAPVRQGKLPTAGVK
QGLEKKEGLFRKHMMGKRVNYAARSVISPDVNIETNEIGIPPVFARKLTFPEPVTSHNVK
ELRQAVINGTAVYPGASIVQNEDGGLIYLDKMEPDARAALAARLLTPQEGPAPNDLTHRD
ARGKTVYRHLKDGDILILNRQPTLHKPSMMAHRAKVLKGEKTIRMHYANCNSYNADFDGD
EMNIHFAQNHVARSEAIHIANTDNQYLAATSGDPLRGLIQDHVVAGVWMTNKSTMFSREE
YYQLLYGALRPENDYSGQGRVKTLPPAIWKPKPLWTGKQIISTLLLNITPPNAGGLTLIS
KGKVGNEHWGPHSKEETVLFYDGELLCGVLDKSQFGASSYGLVHSVYELYGAETAGRLLS
ILSRLFTKFLQHRAFTCRMDDLALTPEGDARRSKILRDAQTFGYEAAVENFPSLDGASPE
ECARRLPILLEEVLRDDAKMANLDLTVKKKMTAVTESVTKTCMPHGLLRKFPDNHMQTMT
MSGAKGSAVNARQISCGLGQQELEGRRVPTMVSGKTLPSFKPFETAAIAGGYIASRFLTG
IRPQEFYFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLKVHYDGTVRGSDSAVLQFA
YGGDGLDVTRQKHLLAFGSEKKKLQDQLFEFALRNERALRARLNVLDIVGLLDEHTAVEH
MQKALKKPHKYPPTMSIYPSTMYIGSTSEAYASVLDAYIKENPHQLILAKSKKKDGEPKV
PKLQSHYKQMPGAMFKLLMNVRYLRSLAEPGEAVGLLASQGCVTGIAFGLDARFGYGYAS
SHRSRVGEPSTQMTLNTFHFAGHGAANVTLGIPRLREIVMTASTKPKTPTMTLPLLTLSS
TIRPPSAEQVTLFTKHASRLTLAAVTSHITVRESLSNARRTYAVQVTFYPADECEAAYGV
SRPAVARAIGGRFALVLRKEVITAIKKAVGEVKDQVGGVGKGRAVRDALDGAGGVGADDD
ADIPEGEMGTNHRDDVSEVGDGDADEMKRKSRTQEAATYSDDESEEESDAEPDIDADEIE
AAVDADGDDDDLEIDLKPGKKSDSKKSKSKKKGTDEWEVSPTLAQDFVDTTKFGGSLEFA
KDACTFDMEFSSSTPKLLLVGILEQCMHKTVIHEIPNITSVHEVKEPDPKHPGQFRTKHL
ETTGTNFSGIWAAASDVVDLDNITSNDIHAILCAYGVEMARTAILKEIESVFSVYKIAVD
FRHLTLIADYMTFDGGYKPFNRRGISTHSSTLLKASYETTAAFLSDATLHGDFDDLTSPS
GNIVLGRPIQTGTGIFSIGVPMA
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggatatcggacatcctatagcatcgcatgtcaagtcaatatcattctcgtttctcaac
tctcatgatattcgacgaatatcagtcaagcaaattgtgaacccggtgctgcttgatgat
ttgaaccgaccgaacatcggaggtctgtatgatccagcgttgggaccgagtgaacggggc
gatgtgtgcggaacatgtcgtctcaattcgttctcatgtcctggacactttggccatatt
gagcttccttcacctgtctatcacccgctgttcatgacgaatatgcttaatctactacga
ggagtttgtatgtggtgtcaccagtttaaaatgtcccagggcgagaaagccaaatatgag
gctaagctagtattgctcgagcgggggttactagctgctgcttccgacgttgacgagttc
tcgatgcgaccgggtaccaagagcgaagagggagcagagccgggcgagactatatcggaa
ttcaggcgacgtctgggcctgtttgttaagcaccatcttaaagatgcccccacctccacc
cggaatgactacaaagacggaccggtatatcaagcccgaaaggatgtcattcagtctttc
ttgaaggctgcagttggatgcaaaaagtgtgctcattgcgatggtttcgggtatacatac
cgcaaggatggacatactcgcattgtggagtatgaactttcgaggaaacataaaaccttg
atggaggtcttgggtaaagtccgacccaacgttcttctcctcgagcgtcgtgcatcccaa
tcctcgaatctttcctctgaatacaccacttccaaccgagacgaggatggagacatcgaa
atggaagatatcgaagaacctgagcctctgggcgaatccacactcgaggatgcaccccga
gatcctggtgaactcccgcgctcagtctctggagcagttaaaacgatccgaggccgaaac
gagcgagtcttgccacccgaggaagcccgcgcacatctccgccgtctttttgcccgtgaa
gcaaaactgacgacacttctctacggccgtcatggtccgtttgcgcgtcaggccaaggcg
gccaacgctgacatgttctttttggatgttttaccggttccgccgacgaggttcaggcct
ccggcgaggatgggcgatagtgtatttgagcatccgcagaatgagttgttgaccaaggtc
ctggttactgcgtaccgtctgagggacttggaggctgccttgagagaggccaataagaag
cctaccgagagggacgaggtcgatgagctcgaggcagctcaagaaggacaccgacaaaag
ctgtttgggcaattgctcgaggctctaatccagctccaaatagacgtcaactcgtttatg
gacagctctaagaacccagcgcccgtccgacaagggaaactcccaactgcaggtgtgaag
caagggcttgaaaagaaggagggtttgttcagaaagcacatgatgggtaaacgagtcaac
tatgctgcccgttccgtcatttctcccgacgtcaatatcgagactaacgaaatcggtatt
ccgcctgttttcgctcgcaagctcacctttcccgaacctgtcacatcgcacaacgtcaaa
gagttacggcaagcagtgataaatggtactgcggtctacccgggtgctagtattgtacag
aacgaagatggtggattgatttatttggacaaaatggaacccgacgctcgtgccgctctg
gccgctcgactccttacgcctcaagaaggcccagcgccaaacgatcttacccatagggat
gcacgaggaaagactgtatatcgacatctgaaggacggtgacatcttgatcttgaatcgt
caacctacgctgcataagcccagtatgatggctcaccgcgcaaaagtactcaagggcgaa
aaaacgatccgcatgcattatgctaactgcaattcgtataatgctgactttgatggagac
gagatgaatattcatttcgcacaaaaccatgttgcccggtctgaagctatacatatcgcc
aataccgataaccaatacctcgctgcgacatccggcgacccgttacgcggtctgatccag
gatcatgttgttgctggtgtatggatgaccaacaagtcgacaatgtttagtcgagaagag
tactatcagttattgtacggcgctctgcgtcccgagaacgactactctggtcaaggaagg
gtcaagacgctgcctccggcgatatggaaaccaaaaccgttgtggaccgggaaacagatt
atttcgactctattattaaatatcacacctccgaatgcgggcggcctaactcttatatcc
aagggcaaggtcggaaacgaacattggggtcctcactcgaaggaagagaccgttctcttc
tacgacggtgaattattatgcggtgtgctcgataaatctcaattcggcgcatcctcatac
ggtctggtccactcggtctatgaactctacggtgccgaaacagctggccgccttttgagc
atcctgagtcggctctttaccaaattccttcaacatcgtgcatttacttgccgtatggac
gatttggctctaactccggaaggagatgctcgtcgttccaagatcctgcgagacgctcag
acattcggatatgaagcagctgtcgagaatttcccgtctctagatggcgcttcccccgaa
gaatgtgctcgacgactcccaattctcctcgaagaagtgcttcgagacgatgccaagatg
gccaacctagatctcaccgtgaagaaaaagatgacggctgtaaccgaatcggtcaccaag
acatgcatgcctcacggtctactccgtaaattccctgacaatcacatgcaaacgatgacc
atgtctggtgctaaaggctccgccgtcaatgctcgtcaaatctcgtgtggactgggtcag
caagaacttgaaggccggcgtgtacctaccatggtgagcggcaagacactgccttctttc
aagccctttgagacggctgctattgccggaggatacatcgccagccgtttcttgaccgga
attcgaccgcaagagttttatttccactgtatggccggacgagaaggtttgatcgatacg
gccgtcaagacgagtcgatcggggtacctccaacgttgtttgatcaaacatctcgagggc
ctaaaagttcattacgacgggacggttcgaggatcggattcggcggtccttcagtttgcg
tatggaggcgacgggttggacgtgactcgtcaaaagcacttgctcgcttttggcagcgag
aagaagaaactccaggaccagttgttcgagtttgcgctccggaacgaacgggctcttcgt
gcgagattgaatgtactcgatattgtcgggttattagatgaacatactgctgtagagcat
atgcagaaggcgttgaagaagccgcataaataccctccgaccatgtcgatatacccgtcc
acgatgtacatcggatcgacaagcgaagcgtatgcatcggttctcgacgcatacatcaaa
gaaaatccacatcagctaatcctagccaaatccaaaaagaaagacggagaaccaaaagtc
ccgaagcttcaaagccactataagcaaatgcctggcgcaatgttcaagctgctcatgaac
gtccgatatctgaggagtttggccgagcctggagaggcggttgggttgttggctagtcaa
gggtgcgtgactgggattgcatttggattggatgctcgtttcggctatggttatgcctcc
agccacaggtctcgtgttggagaaccctcgactcagatgacgctcaacactttccacttt
gcaggacacggtgccgccaatgtcacacttggtatcccacgacttcgagaaatcgtcatg
accgcatctaccaaaccaaaaacaccgacaatgactctccctcttctcaccttgtcttcc
accatccgccccccgtccgccgagcaagtcacgttgttcacaaaacacgcatctcgtctc
acactggccgccgtcacctcccatatcaccgtacgcgagtcactcagtaatgctcgtcga
acatatgccgtacaggtcacattttatccggccgatgaatgcgaagctgcgtatggtgtc
tcgcggccggctgttgctcgtgcaattggaggccggttcgccctcgtgctacgcaaagaa
gtgattactgcgatcaaaaaggccgttggagaagtcaaggaccaggttggaggcgtcgga
aaaggccgagctgtgcgtgacgcgttggatggtgcaggtggggtaggtgcggatgatgat
gccgatatccccgaaggtgagatgggaacgaaccatagggacgacgtatccgaggtcgga
gacggcgacgcggacgagatgaaacggaaatcaaggacacaagaagccgcgacatattcc
gacgacgagagcgaagaagagagtgatgccgagcccgatattgacgctgatgagatcgag
gcggccgtggatgctgatggcgatgacgacgaccttgagattgacttgaagccagggaag
aagtctgactctaaaaagtcaaagagcaagaaaaagggaacagacgaatgggaggtttct
cccaccttggctcaagactttgtggacacgaccaagtttggtggaagcctcgagtttgct
aaggatgcgtgcacgtttgatatggagttctcctcatccacacccaaactcctcctcgtt
ggtatcctcgagcaatgcatgcacaagaccgtcattcacgagattccaaacattacgtcc
gtccacgaggtaaaagaaccagatccaaaacaccccggccaattcaggaccaagcatctc
gagacgacgggaaccaacttctcaggaatctgggccgctgcttccgatgttgtcgaccta
gacaatattacaagcaacgatattcatgcgatcctgtgtgcgtatggagtggagatggct
cgtacggctattctcaaggaaatcgagagtgtgttctcagtgtacaaaattgcagtcgat
ttcaggcatttgacactgattgccgattacatgacctttgacggaggatacaagccattc
aaccgacgaggaatatcaacacacagttctaccctcctcaaggcttcttacgaaacgacg
gctgccttcttatcagacgcgacccttcacggagactttgatgatcttaccagcccatct
gggaacattgtccttggacggccgattcagaccggaactgggatctttagcatcggtgtg
cctatggcataa
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