KEGG   Raphanus sativus (radish): 108808004
Entry
108808004         CDS       T06014                                 
Name
(RefSeq) cullin-3A
  KO
K03869  cullin 3
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108808004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108808004
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108808004
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul3 complex
    Cullin
     108808004
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108808004
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 108808004
NCBI-ProteinID: XP_018435718
UniProt: A0A6J0JJA3
LinkDB
Position
1:complement(10987294..10990199)
AA seq 732 aa
MSNQKKRNFQIEAFKHRVVVDPKYADKTWQILDRAIHQIYNQDASGLSFEELYRNAYNMV
LHKFGDKLYTGFIATMTAHLKDKSKLIEAAQGGSFLEELNKKWNEHNKALEMIRDILMYM
DRTYIESTKKPHVHPMGLSLWRDNVVHSPKIHARLLNTLLDLVHKERTGEVIDRGLVRNV
TKMFMDLGESVYRDDFEKPFLDASSEFYKVESMEFIEACDCGDYLKKAEKRLTEEIDRVG
HYLDGKSEDKITSVVEKEMIANHMQRLVHMENSGLVTMLLNDKYEDLGRMYNLFRRVTSG
LATVRDVMTSHLREMGKQLVTDPEKSKDPVEFVQRLLDERDKYDKIISTAFGNDKTFQNA
SNSSFEYFINLNARSPEFISLFVDDKLRKGLKGIADADVEVVLDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAEKSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMRGFYG
SHPELSEGPTLIVQVLTTGSWPTQPAVPCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTN
MGTADIKAIFGKGQKHELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPAPDLKRCLQSL
ACVKGKNVIKKEPMSKDIGEEDLFSVNDKFTSKFYKVKIGTVVAQKETEPEKQETRQRVE
EDRKPQIEAAIVRIMKSRKILDHNNIIAEVTKQLQPRFLANPTEIKKRIESLIERDFLER
DNTDRKLYRYLA
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgagtaaccagaagaagaggaatttccagattgaggcgttcaagcaccgcgtcgtcgtg
gaccccaaatacgccgataaaacgtggcagatcctcgaccgtgcgattcatcagatttac
aaccaagacgctagcggtctcagcttcgaagagctttacaggaacgcttacaacatggtc
ctgcacaagtttggagataagctctacaccggctttatcgccaccatgacagctcatctc
aaggacaagtccaagctcatcgaggcagctcagggaggatcgtttctcgaagagctcaac
aagaagtggaacgagcacaacaaagcgttggagatgatacgggacatcctaatgtacatg
gacaggacttacatcgagagcaccaagaagccacacgtgcatcccatggggcttagtctg
tggagggacaacgtggtgcattcgcctaagatacacgcgaggcttctcaacacgcttctt
gatctggtccataaggaacggaccggcgaggttattgatagagggttggtgaggaatgtg
accaagatgtttatggacttgggtgagtctgtgtatcgggatgatttcgagaagccgttt
ttggatgcttcttctgagttttacaaggttgagtcgatggagtttattgaggcttgtgat
tgtggggattacttgaagaaagctgagaaacgtctgactgaggagatagatagggtggga
cactacttggatggtaagagtgaggacaagattactagtgtggttgagaaagagatgatt
gctaaccacatgcagaggctggttcacatggagaattcaggtcttgttactatgcttctg
aatgataagtatgaggatttgggtaggatgtataacttgttccgcagggtgaccagcggt
ctcgctaccgtcagagatgtgatgacctcgcatctaagggaaatggggaagcagctggtt
actgatccggagaagtcaaaggatccggtggagttcgtgcagcggctattggacgagcgg
gataaatatgataagatcatcagcaccgcgtttggtaatgataaaacgtttcagaacgcg
tcgaattcttcgtttgagtatttcatcaacttgaatgctcgttctcctgagttcatctcc
ttgttcgttgatgacaagctacggaaaggactcaaaggtatcgcagacgcggatgtggag
gtcgtccttgataaagtcatgatgctgttccgctacttgcaagagaaagacgtgtttgag
aagtactacaagcagcatttggctaaaaggcttctctctggcaaaaccgtgtcggatgac
gcggagaaaagtctgatcgtgaaactgaagacggaatgtggctatcagttcacttcgaaa
ttggaaggcatgttcactgacatgaagacttcagaggacacaatgagagggttttacggt
agtcaccctgagctttcagaaggaccaacacttatcgttcaggttctcactactggttca
tggcccacacagcctgcagtaccttgtaatctcccagctgaagtttcggttctctgcgag
aagttccgctcttattaccttggaacccacaccggtagaagactgtcatggcaaactaac
atgggcacagcagatatcaaagccatcttcggaaagggtcagaaacacgaactgaacgtg
tcgactttccagatgtgcgttctcatgctgttcaataactctgatcgtctcagctacaaa
gagatcgaacaggctactgaaatccctgcaccagatctgaaacgttgcttgcagtcgctt
gcgtgtgtgaaaggcaaaaacgtgataaagaaagagcccatgagcaaagacataggagag
gaggatttgttttcagtgaacgacaagttcacaagcaagttttacaaagtgaagattggt
acggtggtggctcaaaaggagacggaaccggagaagcaagagacgagacagagagtagag
gaagacaggaaaccgcagattgaagcagcgattgtgaggataatgaagtcgagaaagata
cttgaccacaacaacataatagcagaagtgacgaaacagttgcagccacggttcttggct
aacccaacggagataaagaagagaatcgagtcgctcattgaacgtgatttcttggaaagg
gataatacggaccggaaactttaccgctatttagcctaa

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