Raphanus sativus (radish): 108809801
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Entry
108809801 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108809801
KO
K13137
serine-threonine kinase receptor-associated protein
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108809801
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
108809801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_Vps41
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_NWD2_C
eIF2A
Beta-prop_IP5PC_F
WD40_like
FlaF_Ig-like
Motif
Other DBs
NCBI-GeneID:
108809801
NCBI-ProteinID:
XP_018437446
UniProt:
A0A6J0JQX1
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Position
6:37963274..37965298
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AA seq
334 aa
AA seq
DB search
MGVPLVCHGHSRPVVDVAYSPITPDGFFLISASKDSIPMLRNGETGDWIGTFEGHKGAVW
SCSLDKNALRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHRLLTGGMEKI
LRIFDMNRPDAPPKEVATSPGSIRTVEWLHGDNTILSSSTDTGGIRLWDIRSDKIVQTLE
TKFPVTSAEVSQDGRYITTADGSSVKFWDANNFGLVKSYEMPCNVESASLEPKNGNTFIA
GGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWEVGTVNHE
ESNNLSGHVKLVAEEVVRKAESLRISEKATEASK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccattagtttgtcacgggcattcgcgtcccgtcgtggatgtggcgtacagc
ccaataactccagatggtttctttctcattagcgctagcaaagattcgatcccgatgttg
aggaatggggagacaggggattggatagggacttttgaaggacataaaggagctgtttgg
agttgtagccttgataagaacgctttgcgtgctgcctctgcttctgctgatttcactgcg
aagatatggaatgcattgactggagatgagctgcactcctttgaacacaagcacattgtt
cgtgcttgtgccttctctgaggacactcaccgtttgctgactggtggaatggagaaaata
cttcggatattcgatatgaatcggcctgacgcacctccaaaagaagtagcaacttctcct
ggttcaatcagaaccgtcgaatggcttcatggtgataatactatcttaagctcttccaca
gacaccggtggcattaggttatgggacataagaagtgacaagattgttcaaacattagaa
accaagttcccagttactagtgctgaagtaagtcaagatgggagatacattactactgct
gatggatctagtgttaagttctgggacgccaataattttggattggtgaagagctatgag
atgccttgcaacgttgaatcggcatccttggaaccgaaaaacggcaacactttcattgct
ggaggagaagatatgtgggtacacaggtttgatttccagactggagaggagattgggtgt
aacaagggtcaccacggaccagtgcactgcgtgaggtatgcgccaggaggagagtcatac
acgtcaggatcagaggacgggacagtgagaatatgggaggtggggacggtgaaccatgag
gagagcaacaatctgagcggtcacgtgaagcttgtggcagaggaagttgtgcgtaaagct
gaaagtcttcgtatcagtgagaaagccacagaagcttctaaatga
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