Raphanus sativus (radish): 108812972
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Entry
108812972 CDS
T06014
Name
(RefSeq) chaperone protein ClpB4, mitochondrial
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108812972
Chaperones and folding catalysts [BR:
rsz03110
]
Heat shock proteins
HSP100
108812972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
Clp_N
ClpB_D2-small
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
AAA_28
Mg_chelatase
Zeta_toxin
AAA_7
AAA_24
NBD_SMAX1
AAA_18
ABC_tran
TniB
NACHT
Torsin
AAA_25
T2SSE
PduV-EutP
CLP1_P
Motif
Other DBs
NCBI-GeneID:
108812972
NCBI-ProteinID:
XP_018440882
UniProt:
A0A6J0JYY1
LinkDB
All DBs
Position
6:42294545..42298602
Genome browser
AA seq
977 aa
AA seq
DB search
MASRRLSKSASAAIRAYNAFSRPSLLLLLRPPPRAISASAHYFFTSSTRSSPTSSSSLLR
PNSSIPGNATTHGRQQLFPLPFQFLSPRRFSATAAQTNQNSYTEMAWEGILNAFDAARVS
KQQIVESEHLMKALLEQKDGLARRIFAKAGIDNSSVLQATDLFISTQPKVTGDTSGQVLG
SSLGTVLQNAERYKKEFQDDYVSVEHLLLAFYSDNRFGQEFFKNLKLKEEALKDVIKDVR
GSQRVTDQNPEGKYDALEKYGNDLTEMARRGKLDPVIGRDDEIRRCIQILCRRTKNNPVI
IGEPGVGKTAIAEGLAQRIVRGDVPEPLMNRKLISLDMGSLLAGAKFRGDFEERLKAVLK
EVTASNGQTILFIDEIHTVVGAGATGGAMDASNLLKPMLGRGELRCIGATTLTEYRKYIE
KDPALERRFQQVLCGQPSVEDTISILRGLRERYELHHGVKISDGSLVSAAVLSDRYITER
FLPDKAIDLVDEAAAKLKMEITSKPTELDEIDRAVIKLEMEKLSLKNDTDKASKERLHKI
ENDLTALKEKQKELSDQWEQEKSLMTRIRSFKEEIDRVNLEIESAEREYDLQRAAELKYG
TLMSLQRQLEEAEKNLAKFRESGQSLLREEVTDLDIAEVVSKWTGIPLSNLQQSEREKLV
MLEQVLHKRVVGQDMAVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAG
YLFNTENAIVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIE
KAHPDVFNILLQLLDDGRITDSQGRRVSFTNCVVIMTSNIGSHHILETLGNSEDGKEAVY
ELMKRQVVDLARQTFRPEFMNRIDEYIVFQPLDSKEISKIVELQLERVKNRMEQKKIKLQ
YTKEAVDLLSQLGFDPNYGARPVKRVIQQMVENEVAVEVLKGDFAEEDTVVLDVDQTSNK
LVIKKLENSAPIEEMAA
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaggagactatccaagtccgcctctgcagccatcagagcgtacaacgctttc
tcgagaccctctctcctcctcctcctccgtcctcctcctcgcgctatctccgcctctgct
cactacttcttcacatcatccacgcgctcctctcccacctcctcctcctctcttctccgc
ccaaattcttcaatccccggaaacgccaccactcatggccgacaacaactgtttcctctt
cctttccagttcctctctcctcgccgcttctccgccaccgcagctcagacaaatcagaac
tcgtatacggagatggcttgggaagggatactcaacgccttcgacgcagctcgtgtctct
aagcaacagatcgtggagtctgagcatttgatgaaagctctcttagagcaaaaagacggt
ctcgccaggaggattttcgctaaagctggcatcgacaactcctctgttcttcaggctact
gacctcttcatatccacacaacctaaggttactggtgataccagtggtcaggtgctggga
tcgtctcttggtaccgtgttgcagaacgcggagaggtataagaaggagtttcaggatgat
tatgtctctgtcgaacaccttctcttggccttttattccgataacaggttcgggcaagag
tttttcaagaacctgaagcttaaagaggaggccttgaaggatgttattaaagacgtccgc
ggtagtcaacgtgttactgatcaaaatcctgaagggaaatatgatgcacttgaaaagtat
gggaatgatttgactgagatggccagacgaggaaaactcgatcctgtcattggaagggat
gatgagattcggcggtgcatccagatattgtgcaggaggaccaaaaacaatcctgttatc
atcggtgaacctggtgttggtaaaactgctatcgctgaagggttggcgcagcggattgta
cgaggggatgtccctgaacctctcatgaataggaagttaatatctcttgacatgggttca
ctgcttgctggtgccaaatttcgaggagattttgaggaacggttgaaagcagtactgaag
gaagtcactgcttccaatggacagactatcttgttcattgatgaaattcacactgttgtt
ggtgcaggagctactggtggggcaatggatgcgagcaacctcttgaaaccaatgctcgga
agaggtgaactgagatgcatcggtgcaactacactgaccgaataccgcaaatacatcgag
aaagatccagctctggaacgcaggtttcaacaagttttatgtggtcaaccgtctgttgaa
gacaccatttcgatccttcgtgggttaagagagcggtacgagttacaccacggtgttaaa
atatcagatggttcccttgtttcagcggcggttctgtccgatcgctacatcactgaacgc
ttcctgccagacaaagctattgatcttgttgacgaagctgctgcaaagctgaagatggag
atcacttctaaaccaactgagctcgatgagatagacagagctgtgatcaaactggagatg
gagaagctttctttgaaaaacgatactgacaaagcatcaaaagaacgcctacataagatc
gagaatgatttgaccgctctcaaagaaaaacagaaagaactcagtgaccaatgggagcaa
gaaaagtctctcatgactagaatacgttcatttaaagaagagatcgatcgtgtgaacctg
gaaattgaatctgctgaacgtgaatatgatctgcaacgtgctgctgagctcaagtacgga
acacttatgtcccttcaacgccagttagaagaagctgagaaaaatctcgccaagttcaga
gagtctggacagtcattactccgggaagaggtaaccgatctcgacatagcagaggtagta
agcaagtggacgggtattccgctctcgaatcttcagcagtcagagagagaaaagctggtc
atgctggaacaagtgctccacaagagagtcgtcggtcaagacatggctgtaaaatcagta
gcagatgctatccgacgttcgagggctggtctctctgatcctaaccgtcccatagccagt
ttcatgttcatgggtccaacaggtgtcggtaaaaccgagcttgccaaagctctagccggg
taccttttcaacactgagaacgcgatagtgaggatcgacatgagcgagtacatggagaaa
ttctcagtgtcacggctcgttggtgctccccctggctacgtcggttacgaggaaggtgga
cagttgactgaagctgttcgcaggagaccttattcggtggttttgttcgatgagatcgag
aaagctcatcctgatgtcttcaatatcctgctgcagcttcttgacgacgggaggataact
gattctcaagggaggagagtgagtttcacaaactgcgttgtgattatgacgtctaatatt
gggtcccaccacatactggagactctcggcaacagtgaagatggcaaagaagcagtgtat
gagttgatgaagcggcaagttgtggacttagccagacaaactttcaggccagagttcatg
aacagaatcgatgagtacatagtcttccagccgctagattcaaaagaaatctccaaaatc
gttgagttgcagctggaacgagtgaagaacaggatggaacagaagaaaataaagcttcag
tacacaaaagaagcagtggatcttctttctcagcttgggtttgatcccaactatggggca
aggcctgttaagagagtgatccagcagatggtggagaatgaggtcgctgttgaagttttg
aaaggagattttgcagaggaggacacagtcgttctcgatgttgaccagacgagcaacaaa
ttggtcatcaagaagcttgagaacagtgctcccatcgaggaaatggcagcttga
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