Raphanus sativus (radish): 108813705
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Entry
108813705 CDS
T06014
Name
(RefSeq) meiotic recombination protein SPO11-1
KO
K10878
meiotic recombination protein SPO11
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108813705
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
108813705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
JetD_C
Motif
Other DBs
NCBI-GeneID:
108813705
NCBI-ProteinID:
XP_018441839
UniProt:
A0A6J0K4C5
A0A9W3C2J0
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Position
6:3987231..3990166
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AA seq
366 aa
AA seq
DB search
MEGKFQISDTTNLLRKIKDFTRSIVEDLAEGKSPEISINRFRNYCNDPEADCFCSSDEPK
GREILTLRKTSQTYRIDMLLRVLLIVQQLLQENRHGSKRDIYYMHPSAFKAQSVVDRAIA
DICILFKCSRYNLNVVSVGNGLVMGWLKFREAGRKFDCLSSLNTAFPVPVLVEEVEDVVS
LADYILVVEKETVFQRLANDMFCKTNRCIVVTGRGYPDVSTRRFLRLLMEKLQIPVHCLV
DCDPYGFEILATYRFGSMQMAYDIESLRAPEMKWLGAFPSDSEIYGVPQQCLLPLTEEDK
KRTEAMLLRCYLKREMPQWRLELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKIRSESL
PVTNLI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaaatttcaaatttcagatacaaccaatttgcttcgaaagatcaaagatttt
acccgatcgatcgttgaagatctagccgagggaaaatctccagaaatctccatcaatcga
ttcagaaactattgcaatgatccagaagcggattgtttttgcagctctgatgaaccgaaa
ggtagggagattctcactcttaggaagacatctcaaacgtatagaatcgatatgttgcta
agagtactgttgatagttcaacaacttcttcaagaaaatagacatggatccaaaagggat
atctactacatgcatccatcagcattcaaagcacaatcagttgtagaccgcgcaattgct
gatatatgcatcctttttaagtgcagtcggtacaacttgaatgtggtgtctgttggaaat
gggttggtgatgggctggttaaagtttagagaggctggaaggaagtttgattgtttaagc
agcctgaatactgcatttcccgttcctgttctcgtagaggaagtcgaagatgttgttagt
ttagcagattacatactggtggtggaaaaagaaacagtattccagcgtttagcaaatgac
atgttttgcaagacgaaccgctgcatcgttgtcacaggaagaggctatcctgatgtctct
acaagaaggttcttgcgactcttgatggagaagttgcaaatacctgtgcattgtctagtc
gactgtgatccatacggctttgagatcctagccacataccgttttggctcgatgcaaatg
gcatatgatatagaatcattacgagcaccagaaatgaagtggttgggagcttttccttca
gactctgagatatacggtgttccccaacagtgtctcttgccattgacagaagaagataag
aaaagaactgaggcaatgttgctcagatgctacctgaagcgtgaaatgccacaatggagg
ttggaacttgaaacgatgctgaaaagaggagtgaagtttgagatcgaagcactctcagtt
cactcactgtctttcttgtcagaggtttacatcccttctaagattcgcagtgagtcgctt
ccagtcacaaacctaatttga
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