Raphanus sativus (radish): 108817415
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Entry
108817415 CDS
T06014
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108817415
Chaperones and folding catalysts [BR:
rsz03110
]
Heat shock proteins
HSP100
108817415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_18
bpMoxR
AAA_14
nSTAND3
AAA_7
IstB_IS21
ATPase_2
AAA_28
RuvB_N
TniB
DUF815
NACHT
RNA_helicase
TsaE
AAA_25
Zeta_toxin
NBD_SMAX1
Mg_chelatase
AAA_19
T2SSE
ABC_tran
ResIII
DUF87
DNA_pol3_delta2
DUF2987
Tox-ODYAM1
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
108817415
NCBI-ProteinID:
XP_018445590
UniProt:
A0A6J0KC62
LinkDB
All DBs
Position
7:complement(7572410..7575769)
Genome browser
AA seq
913 aa
AA seq
DB search
MNPEKFTHKTNETIAAAHELAVNAGHAQITPLHLAGALISDPSGIFPQSISSAAGGGENA
AQSAERVINQALKKLPSQSPPPDDVPASSSLIKVIRRAQAAQKSRGDTHLAVDQLVIGLL
EDSQIKDLLQEVGVATPKVKSEVEKLRGREGKKVESASGDTNFQALKTYGRDLVEEAGKL
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLRDVRL
VSLDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGKGEGSMDAAN
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVVDTISILRGLKEKY
EGHHGVRIQDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
KRMQLEIELHALEREKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLKQ
KREELMFALQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSDENMMLTEDVGAEHIAE
VVSRWTGIPVTRLGQNEKERLIGLADRLHKRVVGQDQAVSAVAEAILRSRAGLGRPQQPT
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE
GGQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSVIIMTS
NLGAEHLLSGLTGKVSMQVARECVMQEVRRHFRPELLNRLDEIVVFDPLSHDQLRKVARL
QMKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVVREE
IDENSTVYIDAGSGGSDLVYRVEKNGGLVDATTGKKSDVLIHIANGAKKSDAAQAVKKMR
IEEMDDDEEMVED
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggagaagttcacacacaagacaaacgagacaatagccgctgctcacgagcta
gcggtaaacgcaggacacgcacagatcactcctctgcacttagcaggagccctgatctcc
gacccttcagggatattccctcaatcaatctccagcgccgccggtggtggagagaacgct
gctcagtcagccgaaagagtgatcaaccaagctctaaagaagctcccctcgcagtcccct
cctcccgacgacgtccccgcgagctcgagcctcatcaaagtcatccgcagagctcaagcc
gctcagaagtcgcgcggcgacacacacttggccgtagaccagctggtcataggtcttcta
gaagattctcagatcaaggatcttttgcaagaagttggcgtcgcgacgcctaaggtgaag
tctgaggttgagaagttgcgtgggagagaaggcaagaaagtggagagcgcttcgggggat
acaaactttcaagcgttgaagacttacgggagagacttggtggaggaagcggggaagctc
gatccggtgataggtcgtgacgaggagattagaagagtcgttaggatcctctcgaggagg
accaagaacaaccctgtccttatcggagagccaggagttggcaaaacagctgttgttgaa
ggcttagcgcagaggattgtgaagggagatgtccccaacagtcttagggacgtgaggttg
gtgtctttggacatgggtgctttggtggctggtgctaagtacagaggagagttcgaggag
aggttgaaagctgttttgaaagaagttgaggaagctgaagggaaagtgatactctttata
gatgagattcatttggtgcttggcgctgggaagggggaagggtctatggatgcagctaat
ctgtttaagccgatgttagctagaggtcagttgcgttgtatcggtgccacgacgcttgag
gagtataggaagtacgttgagaaagacgctgctttcgagagaaggtttcagcaagtgtat
gtagctgagccgagtgtggttgatactattagtatcttgagagggcttaaagagaagtat
gaaggacatcatggtgttcgtatacaagacagagctcttatcaatgctgctcagctctct
gctcgttatatcactggtcggcatttaccggataaggctattgatttggtggatgaggct
tgtgctaatgttagagtccagcttgatagccagcctgaagagattgataatctcgagagg
aagaggatgcagctggagattgagctgcacgcattggaaagggagaaagacaaagctagt
aaagctaggcttgtggaggtgaggaaagagcttgatgacttgagggacaagcttcagcct
ctgacgatgaagtacagaaaggagaaagagaggattgacgagataagaaggcttaaacag
aagagagaagagctcatgtttgctctgcaggaggcggaacgaagatacgaccttgcgaga
gctgctgacttgagatacggagcgattcaagaagtggagtctgcgatagctcagctcgaa
ggaacctctgatgagaacatgatgctcaccgaggacgttggagcagaacacatcgctgaa
gttgtgagcaggtggactgggattccggtgacgaggcttggtcagaacgagaaggagagg
ttgattggtcttgctgataggttgcacaagagggttgtgggacaggatcaagcggtaagt
gcagtcgctgaggcgattttgaggtctagggcgggacttggaagaccgcaacagccgact
ggttccttcttgttccttggaccaaccggtgttggtaaaactgagcttgctaaggctctt
gctgagcagctgtttgatgatgagaaccttttggttaggattgatatgtctgagtatatg
gaacaacactctgtctctcggttaatcggtgcaccacctggttatgttggtcatgaggaa
ggagggcagttaaccgaggctgtgaggaggcgaccttactgtgtaatactttttgatgaa
gtggagaaagcccacgttgctgttttcaacactttgctccaagtgttggacgatggtaga
ctgacggacggacaagggaggacggtggatttcaggaactcggtgataatcatgacgtcg
aaccttggcgcagagcatcttctctcggggctgactgggaaagtgtctatgcaagtggcc
cgggaatgcgtgatgcaggaggtgaggaggcacttcagaccagagctgctgaacaggctc
gacgagattgtggtgttcgatcctctttcgcatgaccagttgaggaaagtagcccggctc
cagatgaaggatgttgccgtcaggcttgctgagagaggtgtggctttagcagtcactgat
gctgcgttggactatattttggcagagagttatgatccggtgtatggtgctaggccaata
aggagatggatggagaagaaggtggtgacagagctctcaaagatggttgtgcgtgaggaa
atagatgagaactccacggtatacatagatgcaggcagtggtggatctgatcttgtgtac
cgtgttgagaagaatggagggctagtggatgccacgacagggaagaagtcggatgtgttg
attcacattgctaatggggcaaagaaaagtgatgcagctcaggcggtgaagaagatgagg
attgaggaaatggatgatgatgaagagatggttgaggactaa
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