Raphanus sativus (radish): 108817698
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Entry
108817698 CDS
T06014
Name
(RefSeq) DNA topoisomerase 6 subunit A
KO
K10878
meiotic recombination protein SPO11
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108817698
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
108817698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
Motif
Other DBs
NCBI-GeneID:
108817698
NCBI-ProteinID:
XP_018445957
UniProt:
A0A6J0KD93
LinkDB
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Position
7:480516..482258
Genome browser
AA seq
429 aa
AA seq
DB search
MADKKKRKRSKDAQEEDLPFKSILESDDVILKLLKSYISSSLTSAAAGSSGASSSSSSKP
LTLADLSLSSSCREVADLSLSSVQTEIETVIVQIARSILAGDGFSFSVPSRAASNQLYVP
ELDRIVLKDKSTLRPFASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFYTDVKLFQD
QTQSDAVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPN
IDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKME
LKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQC
RLPMTEQDIKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLP
LKLQQQDWL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggccgataagaagaagcgaaagcgatctaaagatgcccaagaggaggatcttcctttc
aaaagcatactcgaatcagatgacgttatccttaaacttctcaaatcctacatctcctct
tctctaacctccgccgccgccggaagcagcggcgcctcctcctcgtcctcatcgaagcca
ctgactctagctgacctctctctctcatcctcctgccgtgaagttgcagatctttccctc
tcctcagtccagacggagatagagacggtcatcgttcagatcgcccgctccatcctcgcc
ggagatggattctccttcagcgtgccctcacgcgccgcctctaaccagctctatgttccc
gagctagaccgcatagtgcttaaagacaaatctactctccgtccctttgcatcagtttct
tctgtcaggaagacaaccatcaccacacgaatcctcgctcttatccaccagctctgtctc
aggaacattcatgtcactaagcgtgatctcttctacaccgacgttaagcttttccaggac
cagacacagagtgatgctgtgttggacgatgtgtcctgtatgctcggctgcacaaggtca
agcctcaatgtaattgcagcagagaaaggtgtggtagtgggaaggctcatattcagtgac
aacggagacatgatagactgcacaaagatgggaatgggtgggaaagctattccacctaac
atcgatcgggttggagatatgcagagtgatgctatgttcatactcttagttgagaaagat
gcagcttacataaggttagctgaagacagattctacaaccgtttcccctgcatcatcgtc
actgcaaaaggccagcccgatgtagccacgaggctgttcttgaggaagatgaaaatggag
cttaagcttccggtgcttgccttggtggatagtgatccttacgggttgaagatcttgtcg
gtttatgggtgcgggtcgaagaacatgtcttacgatagtgcaaacttgactacacctgat
attaagtggcttgggatcaggcctagcgatttggataagtacaagatacctgagcagtgt
aggttgccgatgactgagcaggatatcaagactgggaaagatatgctagaggaggatttc
gtgaagaagaatcctgggtgggtcgaagaacttaacctgatggtgaagacaaagcagaag
gctgagattcaggcgttgagttcttttggtttccagtatttatcagaagtttacttgccc
ttgaaactgcagcagcaggattggctctga
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