Raphanus sativus (radish): 108818788
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Entry
108818788 CDS
T06014
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00600
Sphingolipid metabolism
rsz01100
Metabolic pathways
Module
rsz_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108818788
Enzymes [BR:
rsz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
108818788
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
108818788
NCBI-ProteinID:
XP_018447225
UniProt:
A0A6J0KH50
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Position
8:5454420..5458066
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AA seq
544 aa
AA seq
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MDSLSFSSMKSMLIEARGSLNSRLSEFEPLALVFTPLITLFLAQVIGSVLGVVHEKGLKA
CLVGFIMGFFKKIPGVQSYIDAEKQKVVDQLQSGGNSKKNNWAKELPVRGLGVQVLEKME
SEKRNDPTWQGKCSGTVYIGGSESEGHFTLINQACSMFAHTNPLHIDVFQSVVRFESEVV
AMTAALLGSKEAVSGEEICGNMTSGGTESIVLAVKSSRDYMKYKKGIKRPEMIIPESGHS
AYDKAAQYFNIKLWRVLVGKDFRADVKAMRRHINRNTIMIVGSAPGFPHGIIDPIEELGQ
LAFSYGICFHVDLCLGGFVLPFARKLGYQIPAFDFSVKGVTSISVDVHKYGLAPKGTSTV
LYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLVAGAWAAMMSLGEEGYLENTGKIM
EASKRLEEGVRGISELFVVGKPDMTIVAFGSKALDIFEVNDIMSSKGWHLNALQRPNSIH
ICVTLQHVPVVDDFLQDLREAVETVKANPGPITGGLAPIYGAAGKMPDRGMVNELLVSFM
DSQY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggattctttgtcattttcttcgatgaaatctatgttgatcgaagctcgaggctcgcta
aactcgcgtttgtcggagtttgagcctctggctcttgtctttaccccgctcatcacactt
tttctagcgcaggtcatcggatctgtgttgggcgttgtccacgagaaaggcctcaaagca
tgtcttgtggggtttatcatgggattcttcaaaaagatccctggagtccaaagctacata
gatgcagagaaacaaaaggttgttgatcagttacaatctggtggaaactctaagaaaaat
aactgggctaaagaactgccagtaagaggtctaggtgtccaagttctagagaaaatggag
tctgagaagaggaatgatcctacttggcaaggcaaatgctccggcactgtatacataggt
ggaagcgagtctgaaggacattttacattgataaaccaagcgtgttcaatgtttgcgcat
accaatccgttgcatatagacgtgttccagagcgtggtgcggtttgagtcagaagtagtg
gcaatgactgctgctttactcgggagcaaagaagcggtttcaggagaagagatatgcgga
aacatgacgtctggaggtactgagagtattgtgttggcagtgaagtcgtctcgagactat
atgaagtacaagaagggaatcaaacggccagaaatgattatacctgaatcgggtcactcg
gcttatgataaagcggctcagtattttaacatcaagttgtggcgagttctagtaggcaaa
gacttccgagctgatgtgaaggctatgaggaggcatattaacagaaacaccatcatgatt
gttggatcagcaccaggattccctcatggcatcattgatcctattgaggagcttggtcaa
ctggcttttagctatggaatatgcttccatgttgacctttgccttggtggttttgtgtta
cctttcgctcgtaaacttgggtaccagatcccagcatttgatttttctgtaaaaggagta
acatcaatctcggtggacgtgcataaatatggtttggctcctaaaggaactagcacagtt
ctctacagaaaccatgagatcagaaagcaccaatttgttgctgtaactgaatggtcagga
ggactatacgtgtctccaactatagctgggagtaggcctggttctttggttgctggtgct
tgggctgcaatgatgtctctcggggaagaaggctatctagaaaacacaggaaagataatg
gaagcttcaaagagactagaggaaggtgttagaggaatcagtgaactgtttgtagttgga
aagccagatatgacaatcgtggcgtttggttctaaagcattagatatctttgaggttaat
gacatcatgtcttcaaaaggttggcatctgaatgcacttcagagacccaacagcattcat
atatgtgtaactcttcaacacgtccctgtggtcgatgacttcctccaggatctgcgtgaa
gctgttgaaactgtgaaagcaaacccaggaccgatcacaggtggcttggctccgatatat
ggagcagctgggaagatgccggaccgagggatggtgaatgagcttcttgttagtttcatg
gacagtcaatactaa
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