Raphanus sativus (radish): 108822215
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Entry
108822215 CDS
T06014
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00531
Glycosaminoglycan degradation
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108822215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rsz00536
]
108822215
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
108822215
Glycosaminoglycan binding proteins [BR:
rsz00536
]
Heparan sulfate / Heparin
Enzymes
108822215
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
108822215
NCBI-ProteinID:
XP_018450750
UniProt:
A0A9W3CFR5
A0A6J0KS32
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Position
8:complement(16000973..16004202)
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AA seq
538 aa
AA seq
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MGCCQIISVIVLFLWVFRFSDKTAVSSAVEVKGTVFVYGRAAVGTVDEDFICATLDWWPP
QKCDYGTCAWDHASILNLDLNNTIFQNAIREFAPLKIRIGGTLQDLVIYETADQKQPCIP
FTQNTSLLFGYTQGCLSMHRWNQLNDFFTKTGAKVIFGLNALSGRSIQPNGEAVGAWDYT
NAESFIRYIVQNNHTVDGWELGNELCGSGVGARVAASQYATDTIALRNIVNRVYKDVSPM
PLVIGPGGFFDAAWFTEYLNKSGDSLNATTRHIYDLGPGVDQHLIEKILDPSYLDQEATT
FRSLKSIIINSSTKAVAWVGEAGGAYNSGRNLVSNAFVYSFWYLDQLGMASVYDTKTYCR
QSLIGGNYGLLNTTNFTPNPDYYSALIWRRLMGRKALFTSFSGTKKIRSYTHCARPSKGI
TVLLMNLDNTTTVVANVELNNTFSLRHRKTSSRKIARTSQLTWVSNGETQREEYHLTAKD
GDLHSRTMLLNGNALQVNSTGDIPPLEPIYVNSAEPITIAPYSIVFVHMPNVVVPACA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgggttgttgtcaaataatatcggtgatagttttattcctttgggtgttccggttttcg
gacaagaccgccgtaagctcggccgtagaagtgaaaggaacggtgtttgtgtacggaaga
gcggcagtgggaacagtagacgaagacttcatctgcgccactttggattggtggccgcct
cagaaatgtgactacggaacttgtgcttgggaccatgcttcgattcttaacctggacctg
aacaacactatttttcagaatgcaatcagagaatttgctccattgaaaattagaatagga
ggaacattacaagacttggtgatatatgagacagcagatcagaaacagccttgtattcct
ttcacccaaaacacttcccttctctttggctacacacaaggatgtctctctatgcaccga
tggaaccagcttaatgacttctttaccaaaaccggagctaaagtcatcttcggtctgaat
gcactctctgggcggagcatacaacccaatggtgaagccgtaggtgcctgggactacacc
aatgctgaatcattcatccgatatatagtacagaacaaccacacggtcgatggttgggag
ctcggaaatgagctgtgtggaagtggtgttggtgcaagagttgcagcaagtcagtacgct
acggacaccatagctcttcgaaacattgtgaaccgggtgtataaggatgtgagtcccatg
ccactggtgataggccctggtggtttcttcgatgctgcttggttcacggaatatttgaac
aaatctggcgactctctcaatgccactactcgtcacatctatgatctcggtccaggggtg
gaccagcatctgatagaaaagattctagacccttcgtacctggaccaagaggcaacaacg
ttccgcagcctaaagagcataattatcaactcatcaacaaaggctgtggcgtgggttggt
gaggctggtggcgcctacaacagcgggcgtaaccttgtctctaatgctttcgtttatagt
ttctggtacctggaccaacttggtatggcatcagtttatgatacgaaaacatattgtaga
cagtctctaatcggaggaaactatggcctgctaaatactactaatttcactcccaaccct
gactattacagtgctctgatctggcgacgacttatgggaagaaaggcactgttcacaagc
ttttccggaacaaagaagatacgttcatacacccattgtgcaagaccatcgaaagggatc
acagttttactgatgaaccttgacaacaccacaacagttgttgcgaacgtagagctaaat
aacactttcagtctaagacacaggaagacgtcgtctcggaaaatagccaggacttcccag
ctgacttgggtttctaatggtgaaacccaaagagaagagtaccatttgacagcaaaggat
ggagatctacacagccggactatgctactcaacggtaatgcactgcaggttaattccact
ggtgacatacctccactggaaccgatatatgtaaactcagcagagccaataacaatagct
ccatactccattgtgtttgtgcatatgccgaacgttgttgtgcctgcatgtgcttag
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