Raphanus sativus (radish): 108822216
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Entry
108822216 CDS
T06014
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00531
Glycosaminoglycan degradation
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108822216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rsz00536
]
108822216
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
108822216
Glycosaminoglycan binding proteins [BR:
rsz00536
]
Heparan sulfate / Heparin
Enzymes
108822216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
108822216
NCBI-ProteinID:
XP_018450751
UniProt:
A0A6J0KTA3
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MGCRQIISVIVLFLWVFRFSDKTAISSAVEVKGTVFVYGEEAVGTVDEDFICATLDWWPS
QKCDYGTCAWNHASILNLDLNNTIFQNAIREFAPLKIRIGGTLQDLVVYETAHPKQPCLP
FTQNTSLLFGYTQGCLSRHRWNQLNDFFTKTGAKVIFGLNALSGRSIQPNGEAVGAWDYT
NAESFIRYIVQNNHTVDGWELGNELCGSGVGTRIAARQYAADTIALRNIVNRVYKDVSPM
PLVIGPGGFFDAAWFTEYLNKTGDCLNATTHHIYDLGSGMDQHLIEKILNPSYLDQEGTF
RRLKNIINKSSTKAVAWVGEAGGAYNSGRNRVSNAFVYSFWYLDQLGMSSVYDTKTYCRQ
SLIGGNYGLLNTTNFTPNPDYYSALIWRRLMGRKVLFTSFSGTKKIRSYTHCARQSKGIT
VLLMNLDNTTTVMANVKLNNTFSLRHRKIVATSQLPWVSNGETQREEYHLTAKDGDLHSR
TMLLNGNALQVNSAGDIPPLEPIHVNSAEPITIAPHSIVFVHIPNVVVPACA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtcgtcaaataatatcggtgatagttttattcctttgggtgttccggttttcg
gacaagaccgccataagctcggccgtagaagtgaaaggaacggtgtttgtgtacggagaa
gaggccgtgggaacagtagacgaagacttcatctgcgccactttggattggtggccgtct
cagaaatgtgactacggaacttgtgcttggaaccatgcttcgattcttaacctggacctg
aacaacactattttccagaatgcaatcagagaattcgctccactgaaaataagaatagga
ggaacactacaagacttggtggtatatgagacagcacatccgaaacagccttgtcttcct
ttcacccaaaacacttcccttctctttggctacacacaaggatgtctgtctaggcaccga
tggaaccagcttaatgacttctttaccaaaaccggagctaaagtcatcttcgggctgaat
gcactctctgggcggagcatacaacccaatggtgaagccgtaggtgcctgggactacacc
aatgctgaatcattcatccgatatatagtacagaacaaccacacggtcgatggttgggag
ctcggcaatgagctgtgtggaagtggtgttggtacaagaattgcagcacgtcagtacgct
gcggacaccatagctcttcgaaacattgtgaaccgggtttataaggatgtgagtcccatg
ccacttgtgataggccctggtggtttcttcgatgctgcttggttcacggaatatttgaac
aaaactggagattgtctcaatgccaccactcatcacatctacgatctcggttcaggaatg
gaccagcatctgatagaaaagattctaaacccttcgtacctggaccaagaaggaacgttc
cgcagactaaagaacataatcaacaaatcctcaacaaaggctgtggcgtgggttggtgag
gctggtggcgcctacaacagcgggcgtaatcgtgtctctaatgctttcgtttatagtttc
tggtacctggaccaacttggtatgtcatcagtttatgatacgaaaacatattgtagacag
tctctaatcggaggaaactatggcctgctaaatactactaatttcactcccaaccctgac
tattacagtgctctgatctggcgacgacttatgggaagaaaggtactgttcacaagcttt
tccggaacaaagaagatacgttcatacacccattgtgcaagacaatcgaaagggatcaca
gttttactgatgaaccttgacaacactacaacagttatggcgaacgtaaagctaaataac
actttcagtctaagacacaggaaaatagtagcgacttcccagctaccttgggtttctaat
ggtgaaacccaaagagaagagtaccatttgacagcaaaggatggagatttacacagccgg
actatgctactcaacggtaatgcactgcaggttaattcggcaggtgacatacctccactg
gaaccgatacatgtaaactcagcagagccaataacaatagctccacactccattgtgttt
gtgcatataccgaacgttgttgtgcctgcatgtgcttag
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