Raphanus sativus (radish): 108822716
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Entry
108822716 CDS
T06014
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00600
Sphingolipid metabolism
rsz01100
Metabolic pathways
Module
rsz_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108822716
Enzymes [BR:
rsz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
108822716
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
108822716
NCBI-ProteinID:
XP_018451365
UniProt:
A0A6J0KTW0
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All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MESLSFSSMKSMLIEARGSLNSRLSGFEPLALVFTPLITLFLGQVIGSVLGVVHEKGLKA
CLVGFIMGFFKKIPGVQSYIDAEKQKVVDQLQSGGNSKKNNWAKELPVKGLGSQVLEKME
TEKRNDPTWQGKCSGTVYIGGSESEGHFTLINQACSMFAHTNPLHIDVFQSVVRFESEVV
AMTAALLGSKEAVSGEEICGNMTSGGTESIVLAVKSSRDYMKYKKGIKRPEMIIPESGHS
AYDKAAQYFNIKLWRVPVGKDFRADVKAMRRHINRNTIMIVGSAPGFPHGIIDPIEELGQ
LALSYGICFHVDLCLGGFVLPFARKLGYEIPAFDFSVKGVTSISVDVHKYGLAPKGTSTV
LYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLVAGAWAAMMSLGEEGYLENTGKIM
EASKRLEEGVRGISELFVVGKPDMTIVAFGSKALDIFEVNDIMSSKGWHLNALQRPNSIH
ICVTLQHVPVVNDFLQDLREAVETVKANPGPITGGLAPIYGAAGKMPDRGMVNELLVSFM
DSQY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggagtctttgtcattttcttcgatgaaatctatgttgatcgaagctcgaggctcgcta
aactcgcgtttgtcggggtttgagcctctggctcttgtgtttaccccgctcatcacactt
tttctagggcaggtcatcggatctgtgttgggcgttgtccacgagaaaggcctgaaagca
tgtcttgtggggtttatcatgggattcttcaaaaagatccctggagtccaaagctacata
gatgcagagaaacaaaaggttgttgatcagttacaatctggtggaaactctaagaaaaat
aactgggctaaagaactgccagtaaaaggtctaggttcccaagttctagagaaaatggag
actgagaagaggaatgatcctacttggcaaggcaaatgctctggcactgtatacataggt
ggaagcgagtctgaaggacattttacattgataaaccaagcgtgttcaatgtttgcgcat
accaatccgttgcatatagacgtgttccagagtgtggtgcggtttgagtcagaagtagtg
gcaatgactgctgctttactcgggagcaaagaagcggtttcaggagaagagatatgcgga
aacatgacgtctggaggtactgagagtattgtgttggcagtgaagtcgtctcgagactat
atgaagtacaagaagggaatcaaacggccagaaatgattatacctgaatcgggtcattcg
gcttatgataaggcggctcagtattttaacatcaagttgtggcgagttccagtaggcaaa
gacttccgagctgatgtgaaggcaatgaggaggcatattaacagaaacaccatcatgatt
gttggatcagcaccaggattccctcatggcatcattgatcctattgaggagcttggtcaa
ctggctcttagctatggaatatgcttccatgttgacctttgccttggtggttttgtgtta
cctttcgctcgtaaacttgggtacgagatcccagcttttgatttttctgtaaaaggagtc
acttcaatctcggtggacgtgcataaatatggtttggctcctaaaggaactagtacagtt
ctctacagaaatcatgagatcagaaagcaccaatttgttgctgtaactgaatggtcagga
ggactatacgtgtctccaactatagctgggagtaggcctggttctttggttgctggtgct
tgggctgcaatgatgtctctcggcgaagaaggctatctagaaaatacaggaaagataatg
gaagcatcaaagagactagaggaaggtgtaagaggaatcagtgaactgtttgtagttgga
aagccagatatgacaatcgtggcgtttggttctaaagcattagatatctttgaggttaat
gacatcatgtcttcaaaaggttggcatctgaatgcactacagagacccaacagcattcat
atatgtgtaactcttcaacacgtccctgtggtcaatgacttcctccaggatctgcgtgaa
gctgttgaaactgtgaaagcaaacccaggaccgatcacaggtggcttggctccgatatat
ggagcagctgggaagatgccggaccgaggcatggtgaatgagcttcttgttagtttcatg
gacagccaatactaa
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