Raphanus sativus (radish): 108825510
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Entry
108825510 CDS
T06014
Name
(RefSeq) beta-adaptin-like protein B
KO
K12392
AP-1 complex subunit beta-1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108825510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108825510
Membrane trafficking [BR:
rsz04131
]
Endosome - Golgi transport
Others
AP-1 complex
108825510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
HEAT_EZ
Atx10homo_assoc
Cnd3
Arm_2
XMAP215_CLASP_TOG
Motif
Other DBs
NCBI-GeneID:
108825510
NCBI-ProteinID:
XP_018454311
UniProt:
A0A6J0L408
LinkDB
All DBs
Position
9:20064721..20070025
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AA seq
899 aa
AA seq
DB search
MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQKCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLDALKDLISDNNPMVVA
NAVAALAEIQENSTSPIFEINSTTLTKLLTALNECTEWGQVFILDALSRYKAADPREAEN
IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE
YATEVDVDFVRRAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPAQV
QLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVITDDSNQLEPSLLDELLTNISTLSSVYHKPPEAFVTRLKTTVQKTEDEDFAE
GSEAGYSSGNPADSAASPPVTMGHAAHPAGRQPAPAPAAPAPVPDLLGDLMGLDNAAIVP
VDEPTTPSGPPLPVVVPASTGQGLQISAQLARRDGQVFYSMLFENNTQAVLDGFMIQFNK
NTFGLAAAGPLQIAPLQPGTSARTMLPMVLLQNMSAGPPSSLLQVAVKNNQQPVWYFNDK
IILHALFSEDGRMERGTFLETWRSLPDSNEVQREFPGITITSVDSTIDLLTAYNMFFIAK
RKNGNQDVIYLSAKVPGDVPLLIELTAMVGQPGLKCAVKIPTPEIAPIFFEAVELLFKA
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcacgattctaaatacttctcgacgacgaagaagggagaaatccctgagctc
aaggaggagcttaattcgcagtacaaggataagagaaaagatgcagttaagaaggttatt
gcggctatgactgttggaaaggatgtttcatcacttttcactgatgtagtcaattgcatg
caaacggaaaatttggagcttaagaagcttgtttacctctatctcatcaattacgcgaaa
agccagccagatcttgctattcttgccgttaatacctttgtcaaggactcacaggatcca
aacccgctgatccgagctcttgctgtgcggacaatgggctgcattcgtgttgacaaaatc
actgaatatctgtgtgatcctcttcaaaagtgcctaaaggatgatgatccatatgtccgg
aagacggctgctatttgcgttgctaagctgtatgacataaatgctgaattggttgaggat
aggggtttccttgacgctttgaaggatctgatttcagataataatccgatggttgttgcc
aacgctgtagcagcccttgctgagattcaagagaatagtactagccccatatttgagatc
aatagtaccacccttacaaagctccttaccgctttaaatgaatgcactgagtggggtcaa
gtttttatattagatgctctatcgaggtataaagcagctgatccccgtgaagctgaaaat
attgttgagagagtcacgccaaggttgcaacatgcaaactgcgctgttgtgctttcagcc
gtcaagatgatccttcaacaaatggaacttattactagtacagacgtgattcgaaatctt
tgcaagaagatggctccacctcttgttacattgctttctgccgaacctgagatacaatat
gttgcgcttcgtaacattaatcttattgttcagaaacgacccactatccttgcccatgaa
attaaggttttcttctgcaagtataacgacccaatttatgttaagatggagaagttggag
attatgataaaacttgcgtctgacagaaacatagaccaggttcttctggaattcaaagag
tatgctacggaagtagatgttgattttgttagaagggctgttcgtgcgataggccgatgt
gctatcaaactagagagagcagccgaacgttgcatcagtgttttgcttgagttgatcaag
atcaaagtaaattatgttgttcaggaggccattattgtcatcaaagatatcttcagaaga
tatccaaacacgtatgagtccataattgccacactctgtgagagtttagacactttggat
gaaccagaagctaaggcatctatgatatggatcattggtgaatatgctgaaagaatagac
aatgctgatgagcttcttgaaagtttcctggagagttttcctgaggaaccagcgcaggtc
cagctacagcttctaactgctactgttaagctattcttgaagaagccaactgaagggcct
caacaaatgattcaggttgtgttgaataatgctactgtggagacggataatcctgacctc
agagatcgtgcatacatatactggcgtcttctatctactgatcctgaggcggccaaggat
gttgtcttggctgaaaagccggtgattactgacgactcaaaccaactcgagccatcactc
cttgacgagctgcttacaaacatttccaccttgtcctctgtgtaccacaaaccgccagag
gcatttgtgactcgcttgaaaaccacagttcagaaaacagaggacgaggactttgctgaa
ggaagtgaagcaggatactcatctggtaatccggctgatagtgcagcttcccctccagtt
accatgggacatgccgcacaccctgcaggtagacaaccagcccctgcaccggcggcccca
gctcctgttcccgatctgcttggtgacttgatgggtttggataatgccgcaattgtcccg
gttgatgaacccacgactccgtctggtcctccattgccagttgtcgtgccggcttcaacc
ggtcaaggtctgcagataagtgctcaattagcccgaagagatggacaggttttctacagt
atgctcttcgagaacaacacacaggcggtacttgatggtttcatgattcagttcaacaag
aacacatttggtcttgctgctgctggacctcttcagattgcgccattgcaaccaggaaca
tctgccaggacaatgctacccatggtattgttgcagaatatgtctgctggacctccaagc
tcgctcttacaagtagctgtcaaaaacaaccagcagcctgtttggtacttcaacgataag
attatacttcatgctcttttcagtgaagacggtagaatggaacgtggaaccttcctcgag
acatggaggtcgttaccagactcaaatgaagtccagagagaatttccagggatcaccatc
actagcgtcgactcaactattgatttgctgacagcatacaacatgttcttcatagcaaag
cgcaagaacgggaaccaagacgtgatttatttatcagcaaaggttccgggagatgtaccg
ttgttgatcgaactcactgcaatggtgggccaaccaggtctcaaatgtgcagtgaaaatc
cccactcctgagattgcgcccatcttcttcgaagctgtcgagcttcttttcaaggcttga
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