Raphanus sativus (radish): 108827530
Help
Entry
108827530 CDS
T06014
Name
(RefSeq) histone acetyltransferase HAC1 isoform X1
KO
K04498
E1A/CREB-binding protein [EC:
2.3.1.48
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03083
Polycomb repressive complex
rsz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108827530
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108827530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108827530
03036 Chromosome and associated proteins [BR:
rsz03036
]
108827530
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108827530
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
108827530
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Other transcription factors
Pocket domain CBP
108827530
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
108827530
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
108827530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_KAT11
zf-TAZ
ZZ
PHD
KIX_2
Med15_N
Motif
Other DBs
NCBI-GeneID:
108827530
NCBI-ProteinID:
XP_018456445
UniProt:
A0A6J0L872
LinkDB
All DBs
Position
9:1071942..1079948
Genome browser
AA seq
1687 aa
AA seq
DB search
MNIQAHMSGQQGNNMSQQNGNSQMQNLVNVSGSAGAAPPPTNTSAGLGPSRVDNDLSRLR
QNMRIKIFSILQQKQPSPADDASKAKYMDVARRLEEGLFKIANTKEDYLNQSTLEPRLAS
LIKGRQLTNYNQRQANSSSVGTMIPTPGLQHSGGNPNMMMTSSVDAAMAGSNNITTTAMN
TGSLLNSGGMLGGNMSNGYQHSSSNFGLGSGGNMTSMSSQRNTGQMMPTPGFVNNNSNNN
NNNGKSYLSVEASNNSGGFSTASMMAPQPQQQQQQQRQNIGGQNSRLLHSLGSQMGVGLR
PGMQQIMSNVSNNSINSGVGMNAKGVDSGTRNSQQVYDNLQRSGMQGEGYGTNNSDPFGS
GNLYGAVTSVGTMTNTQNTNTTSFQSVPRTSSSLSHQQQQFQQQPNRLQQQPNQLHQQQQ
QFLRQRQLKQQQRFISHDAFGQNHVASDMGTHVKHEPGIENPSESIHSQTPEQFQLSQFQ
NQYQNNADDRHAGSQILPATSQSDMCATVPQNSQQIQQMLHPQSMASDSINSFSNLSVGV
KSESGLRGDWQSQSQEHTQVSNSMSNQLHIQNDFRQRLSGPDEAQPNNMSGGSIVQNHIS
TTSESPNPQTPVGTSCKYGNGNQDPRFRNQQKWLLFLRHARNCKAPEGKCPDRNCVTVQK
LWKHMDSCDAPQCSYPRCRPTKTLINHHRSCKESNCPVCVPVKAFLQQQANARSLARLKT
ESGAARSVNEAGISSDAVQTSTGATSCASPVADISKHLQPSLKRLKVEQSSQPVNIETES
CKSSVVSITEAQSSQYAERMDHRQSDVRPPSRYEVKAEVSEASVQARPDLKETKIGIVEN
ISKQRPVVEAVKQDLSDASPRQEKCKIEKEAEPPKKEIMVECVKPQPKSGKAEIKGVSLT
ELFTPEQVREHIRGLRQWVGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTP
CGARIKRNAMYYTVGAGDTRHYFCIPCYNESRGDTIVAEGTPIPKARLEKKKNDEETEEW
WVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPYCYIAEVEQSKRKPLPQSAVLGAKDLP
RTILSDHIEQRLFKRLKQERTDRARAQGKSFDEIPTAESLVIRVVSSVDKKLEVKPRFLE
IFREDSYPTEFAYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECAFPNQRRVYLSYLDSVK
YFRPEVRSYNGEALRTFVYHEILIGYLEYCKLRGFTSCYIWACPPLKGEDYILYCHPEIQ
KTPKSDKLREWYLAMLKKASKEGIVAETINLYDHFFMQTGECRAKVTAARLPYFDGDYWP
GAAEDLIYQMSQEEDGRKGNKKGLLKQKITKRALKASGQTDLSGNASKDLLLMHKLGETI
HPMKEDFIMVHLQPSCTHCCILMASGNRWVCSQCKYFQICDKCYEAEERREDRERHPVNF
KDKHALYPVEITDIPADTRDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMV
LYHLHNPTAPAFVTTCNACHLDIETGQGWRCEVCPDYDVCDSCYRRGVNHPHKLTNHPSL
ADQNAQNKEARQLRVVQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGIQCKVRASG
GCVLCKKMWYLLQLHARACKESECHVPRCSDLKEHLRRLQQQSDSRRRAAVMEMMRQRAA
EVAGGSS
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcaggctcacatgtctggacaacaagggaacaacatgtcccagcagaatggg
aactctcaaatgcagaatttagttaacgttagtggtagtgctggtgctgctcctcctcct
actaatactagtgctggtttaggaccttcacgtgttgacaatgacctctccagacttcgc
cagaacatgcgaatcaagattttcagtatcttgcagcagaaacaaccttcaccagctgat
gatgcatcaaaggcaaagtatatggatgttgctagacgcttagaggaaggcctgtttaaa
attgccaacaccaaggaagattacttgaaccagtcgacccttgaacctcggctggcaagt
ctaatcaaaggcagacagttgaccaactacaatcaacgacaagctaattcttcctccgtt
ggaacaatgatacccactccagggttacaacatagtggtgggaatccgaatatgatgatg
acatcctctgttgatgctgcaatggctggaagtaataacatcacaactactgctatgaac
actggaagccttcttaactctggtggcatgcttggaggtaacatgtctaatggctaccag
cattcatcgagtaattttggtcttggttctggagggaacatgacatcaatgagctcgcaa
agaaatacgggccagatgatgcctacccctggatttgtcaacaacaatagtaataacaac
aacaacaatggcaaatcttacttgagtgttgaagcttccaataatagtggcgggttttct
actgcgtctatgatggcacctcagcctcagcagcagcaacagcaacagaggcagaatatt
ggtggccaaaatagtcgtctgttgcatagccttggaagtcaaatgggtgttggccttaga
cctggcatgcaacaaataatgtctaatgtgtctaacaactccataaatagtggtgttggg
atgaatgcaaaaggtgtagattcaggaaccagaaattcacagcaggtttatgataacctt
cagcgttcaggaatgcagggtgaaggatatggcacaaataattctgaccctttcggatcg
ggaaacttgtatggtgctgtaacatctgttggaactatgacaaatactcagaataccaat
acaacaagttttcagtctgtgcctagaactagctcttctctgtcacatcaacagcagcag
tttcagcaacagcccaatcgacttcagcaacaacctaatcaacttcaccagcagcagcag
cagtttcttcgtcaacggcagttgaagcagcagcagagattcataagtcatgatgctttt
gggcaaaaccatgtggcctctgacatgggtacacacgttaaacatgaacctggaatcgag
aaccctagcgagtctatccactcccagactcctgagcaattccagctttctcagtttcag
aatcaataccagaacaatgcagatgaccgtcatgcaggttctcaaattctccctgccaca
agtcagagtgatatgtgtgcaacagttccccagaacagtcaacagatacagcagatgttg
catccgcaaagtatggcttcagactctattaacagttttagcaacctttctgttggagtg
aaatcagaatctggtctgcgtggtgactggcaatctcagtcacaggaacatactcaagtg
tctaatagtatgtcgaatcaactgcacattcagaatgatttccgtcaaagattgtcagga
ccggacgaagctcagcccaataatatgtctggagggtctatagttcaaaatcatatatcc
actacatcagaatctcctaatcctcaaacccctgtaggcacctcttgtaaatatggaaat
ggaaaccaagatccgagattcagaaatcaacagaaatggctcctgtttctacgccatgct
cgcaactgcaaagcgcccgaaggcaagtgtcctgaccggaattgcgttacggtgcagaag
ctttggaagcacatggacagttgtgatgcacctcagtgttcatatccccgttgccgaccc
acaaagacattgattaatcaccatcgaagttgtaaagaatctaactgtcctgtctgtgtt
cctgtgaaagccttcttacagcaacaggcaaatgcccggtcgctagctcgtttaaaaact
gaaagcggtgcagcaaggtcagtgaatgaagctggaatatccagtgatgcagtacagacc
tctactggtgcaacatcatgtgcttcgcctgttgctgatatttcaaagcatttgcaacct
tcattgaaacgattgaaggtggaacagtcttctcaacccgtgaacattgagacagaaagt
tgtaagagctcagttgtttccataacagaagcacaatcgtctcagtacgctgaaagaatg
gatcataggcagagtgatgtacgtccaccttctaggtatgaagtgaaagctgaggtttct
gaagcttctgtccaggcacgacccgatttaaaagagacgaaaattggaattgttgaaaat
atttccaagcaaaggcctgtcgttgaagcagttaaacaagatttgtctgatgcctcacct
cggcaagagaaatgcaaaattgagaaagaagctgagccacctaaaaaagagattatggta
gagtgcgttaaacctcaacccaaatctggaaaagcagaaataaagggtgtttcattaact
gagttgttcactcctgagcaagtaagagaacatatccggggtcttcgtcagtgggttggc
cagagtaaagcaaaagctgaaaagaatcaggctatggagcattcaatgagtgagaattcc
tgccagctgtgtgcagtggagaagctcacctttgagccaccacctatttattgtacccct
tgtggtgcccgcataaagagaaatgcaatgtattacactgtaggagctggtgacactcgt
cactacttttgtattccgtgttataatgagtcccgtggggacactatagtagctgaaggg
acgcctatacctaaggcaaggctcgagaaaaagaaaaatgatgaagagactgaagaatgg
tgggtccaatgtgataaatgtgaagcctggcagcatcagatttgtgctttatttaacggg
cgaaggaatgatggagggcaagctgagtatacctgcccgtattgctatatagcagaagtg
gaacaaagtaagaggaagcctttacctcagagtgctgttcttggagctaaagatttaccg
cgaacaattctcagtgaccatatagagcagcggttgtttaagaggctgaagcaggaaaga
acagacagagccagggctcaaggaaaaagttttgatgagattcctacagcagagtccctt
gtgattagagttgtttcatctgtcgacaagaaactggaagtcaaaccccgatttcttgaa
attttccgggaggacagttatccaacagaatttgcatacaaatccaaggtggttctgtta
ttccaaaagattgaaggtgtagaagtatgcttatttgggatgtacgtccaagaatttggt
tctgaatgcgcatttcctaatcaacgccgagtttatctctcttatttggattctgtaaag
tactttagaccagaggttagatcttataacggagaggctctgcgcactttcgtttaccac
gaaattctgatcggttacctagaatactgcaagctgcgtggtttcactagctgctacata
tgggcttgtccgcctctcaagggcgaggactatatcttatattgtcatccagaaattcag
aagacgccaaaatctgataaactacgagagtggtacttagcaatgttgaaaaaagcttca
aaagagggcattgtggcagaaactattaatctatatgatcatttcttcatgcaaactggt
gaatgtagagctaaagttactgcagcaaggctcccatatttcgatggtgactactggcca
ggtgcagcagaggatcttatataccaaatgagtcaagaagaagatggcagaaagggcaat
aagaaaggactgctcaagcaaaaaatcacaaaaagggctctaaaggcttctgggcagact
gatctatctgggaatgcatccaaggatctgctgctaatgcataagcttggtgagaccatt
cacccaatgaaggaggactttatcatggtccacttgcaaccttcttgcacacattgctgt
atactgatggcatctggaaatcgttgggtttgcagtcagtgcaaatactttcagatttgt
gataagtgttatgaggctgaagagcggcgtgaagacagggaaaggcatcctgttaatttt
aaggataagcatgcattatatcctgttgagattacggacattcctgcagatacgagggac
aaggatgagatactcgaaagcgagtttttcgacactaggcaggcgttcctgagtctttgt
caagggaaccattatcagtacgacacgttgaggcgggcaaagcattcgtcgatgatggtc
ctttatcatctgcataatccaactgctccagcctttgtcacgacctgtaatgcgtgtcac
ctcgacattgaaactggtcaaggctggcgctgtgaagtatgtccagactacgatgtgtgt
gattcatgttaccgtagaggagttaatcatcctcacaagctgaccaatcatccatctcta
gctgatcaaaatgctcagaacaaagaagctaggcagttgcgtgtcgtgcagcttaggaaa
atgcttgatcttctggtacatgcatcacaatgtcgttcggcacattgtcaatatccaaat
tgccggaaagtgaagggactgttccgacatggtatacaatgcaaagtgcgtgcttcagga
ggttgtgttctatgcaagaaaatgtggtatcttctgcaactccacgctcgggcctgcaaa
gaatccgagtgccatgtacctcgttgcagtgacctgaaggagcatctgagaagattacag
cagcaatcagattcacggcgtagagcagctgtgatggagatgatgagacaaagagctgca
gaagtcgctgggggatcaagttaa
DBGET
integrated database retrieval system
