Raphanus sativus (radish): 108827671
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Entry
108827671 CDS
T06014
Name
(RefSeq) long chain acyl-CoA synthetase 3 isoform X1
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00061
Fatty acid biosynthesis
rsz00071
Fatty acid degradation
rsz01100
Metabolic pathways
rsz01212
Fatty acid metabolism
rsz04146
Peroxisome
Module
rsz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108827671
00071 Fatty acid degradation
108827671
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108827671
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rsz01004
]
108827671
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108827671
Enzymes [BR:
rsz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108827671
Lipid biosynthesis proteins [BR:
rsz01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
108827671
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of breast milk
108827671
Exosomal proteins of breast cancer cells
108827671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108827671
NCBI-ProteinID:
XP_018456625
UniProt:
A0A6J0L8T0
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Position
9:complement(27603219..27626169)
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AA seq
660 aa
AA seq
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MTTDRFIVEVEKGKEGVDGGSPSVGSVYRSIYAKDGFPEPADDLLSCWDIFRLSAEKSPD
NPMLGRREIADGKAGKYVWQTYKEVYDIVIKLGNSIRTIGVGKGEKCGIYGANSPEWIIS
MEACNAHGLYCVPLYDTLGAGAIEFIICHAEVSLAFSEEKKISELLKTAPNSTTYLKNIV
SFGEVSNVQRVEAERHGLSIYSWDQFLKLGEGKHFELPEKKRSDICTIMYTSGTTGDPKG
VLLTNESIIYLLEGVKKLLKTINEELTSKDVYLSYLPLAHIFDRVIEELFIYEAASIGFW
RGDVKILVEDIAALKPTIFCAVPRVLERIYNGLQQKLSDGGFLKKTLFNFAFNHKHSNMV
KGKPHEQAAPLFDKIVFKKVKEGLGGRVRLILSGAAPLAAHIESFLRVVACAHVLQGYGL
TESCGGTFVSIPNELQMLGTVGPPVPNVDIRLESVPEMGYDALASKPRGEICIRGKTLFS
GYYKREDLTQEVFIDGWLHTGDVGEWQPDGAMKIIDRKKNIFKLSQGEYVAVENLENIYS
HVAAIESIWVYGNSYESYLVAVVCPSKIQIEHWAKEHNVSGDFETICQNQKTKEFILGEF
NRVAKDKKLKGFELIKGVHLDTVPFDMERDLITPSYKKKRPQLLKYYQKEIDEMYNKANK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgatcggttcattgttgaggttgagaagggaaaagaaggcgtcgatggagga
agtccgtcggtcggttcggtttaccggagtatctacgccaaagacggttttcctgaaccg
gccgatgatctcctcagttgctgggatattttccgcttatctgcagagaaatctccagat
aatcccatgcttggccgtagagaaattgctgatggaaaagctggtaaatatgtatggcaa
acttacaaagaagtatatgatatagtgatcaagcttggaaactctatccggactattgga
gttggaaaaggagagaaatgtggtatttatggcgccaacagccctgaatggattataagc
atggaggcttgcaacgctcatggactctactgtgtacctctgtatgacactcttggtgct
ggagcaatagaattcatcatttgtcatgctgaggtttcgcttgctttttctgaggagaaa
aagatttctgagttattgaagacagctccaaattcaactacatatttgaagaatattgtg
agctttggggaggtttcaaatgtgcagagagtagaagctgagaggcacgggttatcgata
tactcatgggaccaatttttgaagctaggtgaaggtaaacattttgagttaccggagaaa
aaaagaagcgatatttgcaccataatgtatacaagtggcacaactggtgatcctaaagga
gtcttgctcacaaatgagagcattatttatctacttgaaggtgttaaaaagttgcttaaa
actatcaatgaagagttaaccagtaaagatgtttacctctcatatctacctctggctcat
atcttcgatcgcgtgattgaggaattgtttatatatgaagcagcctccataggattttgg
agaggggatgttaagattttagttgaagacattgctgctttgaaaccgactattttctgc
gctgttcctcgtgtgctagagaggatatacaacggtcttcagcagaaactttctgatggt
ggtttcttaaagaagaccttatttaacttcgccttcaaccacaaacatagtaacatggtg
aaaggaaagcctcatgaacaagcagctccactctttgacaaaattgtatttaaaaaggta
aaagaaggtttaggaggaagagtgcgtctaatactctcaggagcagctcctcttgcagct
cacatcgaatctttccttcgagttgtcgcatgtgctcatgttcttcaaggatacggtcta
acggagagttgtggtgggacatttgtgtcgataccaaatgagcttcaaatgcttggaacg
gttggtccaccggttccaaacgttgacataaggctcgagtcagttccagagatgggttac
gacgctcttgctagcaagccacgtggagagatttgcataagaggaaagactttgttctct
ggatattacaaacgtgaggatctcactcaagaagtcttcattgatggatggcttcacact
ggtgatgtcggtgagtggcaacctgatggagccatgaaaatcatcgacagaaagaagaac
atctttaaactctcacaaggagaatacgttgcggttgagaacttggagaacatttacagc
cacgtagccgccattgaatcgatatgggtatatggaaacagctatgagtcttacttagtg
gcggtggtatgtccaagcaagatacagatcgaacattgggctaaagaacacaacgtttca
ggagactttgagactatctgtcaaaaccaaaagaccaaagagtttatccttggagagttc
aatagagtagccaaagacaaaaagctgaagggatttgagctgataaaaggtgttcacttg
gacacagttccattcgacatggaaagagatctcatcacaccttcttacaagaagaaaagg
cctcagcttctcaagtactatcagaaagagattgatgaaatgtataacaaggcaaacaag
tga
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