Raphanus sativus (radish): 108830840
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Entry
108830840 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108830840
KO
K12869
crooked neck
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108830840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108830840
03036 Chromosome and associated proteins [BR:
rsz03036
]
108830840
Spliceosome [BR:
rsz03041
]
Complex B
Other components
Prp19-related factors
108830840
Complex C
108830840
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108830840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_16
NRDE-2
TPR_CcmH_CycH
HAT_Syf1_M
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
108830840
NCBI-ProteinID:
XP_056853889
UniProt:
A0A9W3CR50
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MASFVKDTQVKLPRPARVKNKTPAPLQITAEQLLREARERQEPDHILPPQQNITDSAEFS
DYKLRRRKEFEDRIRRPGPPIYVWLNYAGWEESLKDYARARSVWERALQGDYKNYSLWLK
YAEFEMRNKFVNSARNVWDRAVTVLPRVDQLWYKYAHMEEMVGNIGGAREVFERWMKWSP
DEQGWLSFINFELRYKETERARDVYERFVLCHPKASSYIHYAMFEVKGGEVARAREVYER
AVKNLGDCDEEIFVAFGEFEERCNEVERARVIYKFGLDRVGRGDELYRKFVAFEKQYGDK
EGIDDVIVRKRRSEYEDQVRKNPLNYDAWFDYIRLEEEEGSVGDKERIREVYERAIANVP
PANEKLYWRRYIYLWINYALYEEIQAEDVERARQVYRECLKLVPHASFSFAKIWLLAAQF
EIRQLNITAARKILGNAIGIAPNKDKIFKEYIEIELQLGEIDRCRRLYERYLEWSPEKCY
VWCKFAKFERSLEETERARGIFELAVAQHALDLPEMVWKAYIDFEMSQGEVERTRSLYER
LLQRTKHYKVWVSFAIFEAGEQEEGDIERKRECIRRTRAVFDRAYMYYKDLTPELKEERA
KLLEDWLKMEVSFGMLGDVSIVESKLPKKLKKRKSITGEDGSVEYVEYTDYLFPEELQTL
NLNILEAAYRWKKQKVNSV
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttcgttaaagatacacaagtgaaactaccaagaccagcgcgagtcaagaac
aagaccccagcaccgcttcaaatcacagccgagcagctcctaagagaagctcgagagaga
caagaacctgatcacatcctgccacctcagcagaacatcaccgactcagccgagttttcg
gactacaaactccgccgtcgcaaggagttcgaggaccgcatccgccgcccaggaccacct
atctatgtatggttaaactacgcaggctgggaagagtctctgaaagattacgcacgtgcc
agaagcgtgtgggaacgcgccttgcaaggagactacaagaactattcactctggctcaag
tacgcggagttcgagatgaggaacaagtttgtaaactccgcaagaaacgtctgggaccga
gccgtcacggttctaccgcgcgtggaccagctttggtacaagtacgcgcacatggaggag
atggttgggaacatcggtggagctagagaggtattcgagcggtggatgaagtggtcacct
gatgaacaaggttggctctcgtttattaacttcgagcttcggtacaaagaaaccgaacgt
gcgagagacgtctacgagaggtttgttctttgtcatccgaaagcgtcttcttatattcac
tacgcaatgtttgaggtgaagggaggtgaagtcgcacgcgcgagggaagtatacgaacgc
gccgttaagaatcttggagactgcgatgaagagatctttgtagcctttggtgagttcgaa
gaacgttgcaatgaggtggaacgagctagggttatctacaagtttggtcttgatcgtgta
ggaagaggagatgagctgtacagaaagtttgtggcgtttgagaaacagtatggggacaag
gaaggtatcgatgacgtcattgttaggaagagaaggtctgagtacgaggatcaagtgagg
aagaaccctttgaactatgatgcgtggtttgattacattaggttagaggaagaggagggt
tccgtgggggacaaggaaaggattagagaagtttacgagagggcgattgctaacgttcca
ccggctaatgagaagctttactggagaagatacatttatctatggattaactatgcgttg
tatgaagagattcaagctgaagatgtggagcgtgcacggcaagtatacagagaatgtctg
aagcttgtcccacacgcaagcttttctttcgcaaaaatatggctcctcgctgcacaattt
gagatcaggcagttgaatatcaccgctgctcggaagatactagggaatgctattggtatt
gctccaaacaaggacaagatcttcaaggagtatatcgagatcgaacttcagctgggagag
attgatagatgcaggagactttacgagaggtatctcgaatggtctcctgagaagtgctac
gtgtggtgcaagtttgcaaagtttgagaggtccctcgaggaaacagaacgagcaagaggt
atattcgagcttgcggtagctcagcatgctctcgacttgcccgagatggtatggaaagct
tacatcgattttgagatgtcacaaggggaagtagagaggacacgttccttgtatgagaga
ctcttgcaacgtacgaagcattacaaggtttgggttagttttgcaatatttgaagctggt
gaacaagaagaaggtgatattgaacgtaaacgagagtgcatcagacgcactagagcggtt
tttgaccgagcctacatgtattacaaagaccttacaccggagctgaaggaagaaagggca
aagctgttggaggattggcttaagatggaagtgagctttggtatgctcggggatgttagc
attgtagagtcaaagctccctaagaagctcaagaagaggaagtcaataaccggagaagac
ggttcggtagagtatgttgaatacactgattacctcttccccgaagagttgcagactttg
aacctcaacattcttgaagctgcttatagatggaagaaacagaaggtcaattctgtgtga
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integrated database retrieval system
