KEGG   Raphanus sativus (radish): 108830943
Entry
108830943         CDS       T06014                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108830943
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    108830943
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108830943
Spliceosome [BR:rsz03041]
 Complex B
  Other components
   Prp19 complex
    108830943
 Complex C
   Prp19-CDC5 complex
    108830943
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    108830943
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 108830943
NCBI-ProteinID: XP_018460014
UniProt: A0A6J0LJY9
LinkDB
Position
8:1522396..1525812
AA seq 836 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLLPTQWRTIAPIVGRTPSQCLERYEKLLDAACTKDENYEASDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIGGRHKNRKRKGIDYNAEIPFEKRAPAGFYDTGDEDRPADQVKFPT
TIEELEGKRRADVEAQLRRQDVARNKINERKDAPAAILQANKLNDPEAVRKRSKLMLPPP
QISDHELEEIAKMGYASDLLTENEELTEGSAATRALLANYSQTPKQGITPVRTPQRTPAG
KGDAIMMEAENLARLRDSQTPLLGGENPELHPSDFTGVTPRKKEIQTPNLMLTPSMTPSM
TPGGAGLTPRIGLTPSRDGSSFAMTPRGTPFRDELHINEDMDMHESAKLERQRREEARRS
LRSGLTGLPQPRNEYHIMAQPPPEESEEPEEKIEEDMSDKIAREKAEKEARHQALLRKRS
KVLQRDLPRPPAASLELIRNSLLSANGDKSSVVPPTPEEVADELVRKELLQLLEHDNAKY
PLDEKTEKKKGVKNRANSSGSQVTAIEDFEETELEEADKMVKEEAQFLCVAMGNENKTLD
DFVKAHDDCVKDVMYFPTRNAYGPSSVAVKAEKVAALQVEMENARKKMEEDEKKAEHMKA
KYRTYTKGHEKRAETVWSQIEASLKQIEIGGTEVECFKALKRQEEMAASFRKKNLEEEVV
KQKETERKLQARYGELLSTLEKAEEIMVGFRAQALKQADAEDSSHNLKEAKLATGE
NT seq 2511 nt   +upstreamnt  +downstreamnt
atgaggataatgatcaagggaggtgtgtggaagaacaccgaagatgagatcctcaaagcc
gccgtgatgaagtacggcaagaaccagtgggctcggatctcgtctctcctcgttcgcaag
tccgccaaacagtgtaaagctcgttggtacgaatggctcgatccctctatcaaaaagacg
gaatggaccagagaagaagatgagaagcttctacaccttgcaaagcttttacctactcag
tggagaaccatcgctcccatcgtggggcgtacgccgtctcagtgccttgagaggtacgag
aagcttctcgacgcagcgtgcactaaggacgagaattacgaagcatctgatgatccaaga
aagctgcgtcccggtgagatcgatcccaatccggagtcgaagcctgctcgtcctgatcct
gtggatatggacgaagacgagaaggaaatgctttctgaagcgagggcgagactggctaac
actaggggaaagaaggctaaaagaaaagctagagagaagcagctcgaggaagcgaggagg
cttgcttctctgcagaagaggagagagttgaaggcggctgggattggtggaaggcataag
aataggaagcggaaagggattgattataatgcggagattccttttgagaagagagcgcct
gcggggttttacgacactggtgatgaagatcggcctgctgatcaagtgaagtttccgaca
actattgaggagcttgaagggaaaagaagagctgatgtggaggcgcagttgcgcagacaa
gatgttgcgaggaacaagattaacgagaggaaggatgctccagcagctatactgcaagcg
aacaagctgaatgatccggaagctgttaggaagaggtcaaagctaatgttaccaccaccg
cagatttctgatcacgagctggaggaaattgcaaagatggggtacgccagtgatcttctt
actgagaatgaggagctgacagaaggcagtgctgctactcgtgcgcttttggcgaattat
tcacaaacaccaaagcaagggataacgccggtgaggacgccgcaaagaactcctgctggt
aaaggggatgctattatgatggaagcagaaaacttggctagattgagagattctcagaca
cctttgcttggtggagaaaatcctgagttgcacccttctgactttactggggtcactcct
aggaagaaagagattcaaacgcctaatctgatgctgactccttcaatgactccttcgatg
actcctggtggtgctggccttactcccagaattggcttgacgccatcaagggatgggtct
tcttttgctatgacacccagaggtactcccttcagggatgaacttcacattaatgaagac
atggacatgcacgagagcgctaaacttgagaggcagagacgagaggaagctagaaggagc
ttacgctctggacttactgggcttcctcagccaaggaacgagtaccatataatggcacaa
cctcctccagaggaaagtgaagagccagaagagaaaattgaggaagacatgtctgacaag
atagctagggaaaaggctgagaaggaagcaagacatcaggcactgcttaggaaaaggtcc
aaggtgttgcagagagatcttcctagacctccagcagcttcgttggaactaattaggaat
tcattgctttcagccaacggagacaaaagttccgtcgttcctcctactccagaagaggtt
gcagatgaattggtaaggaaggagcttctacaattgctggagcatgataatgcaaagtat
cctcttgatgagaaaactgagaaaaagaagggagttaaaaaccgtgctaacagttctggt
tctcaagtgactgcaattgaagactttgaggaaactgaactcgaagaggctgacaaaatg
gtaaaggaagaggcgcagtttctttgcgtggcaatgggaaacgagaacaagacccttgac
gatttcgtaaaagctcacgacgattgcgtgaaggatgtcatgtacttccccactcgaaat
gcttacgggccctcaagtgttgctgtgaaggcagagaaagttgcggctttgcaagtggag
atggagaatgcgagaaaaaagatggaggaggatgagaagaaggcagaacacatgaaggcc
aagtatagaacttatacaaagggtcatgagaagcgggcagagaccgtgtggagccaaata
gaggcgagtctgaagcagattgagattggtggaacagaagtagagtgctttaaagcattg
aagaggcaagaagagatggctgcatctttcagaaagaagaatctggaggaagaagtggta
aagcaaaaggagactgagcggaaactgcaagcgcgctatggggaactgttgtcaacgctt
gaaaaagcagaggagataatggtcggtttcagagcacaagcattgaaacaagcggacgct
gaagattcttctcacaatctgaaagaagccaagctagccactggagagtaa

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