Raphanus sativus (radish): 108842470
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Entry
108842470 CDS
T06014
Name
(RefSeq) chaperone protein ClpB3, chloroplastic
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108842470
Chaperones and folding catalysts [BR:
rsz03110
]
Heat shock proteins
HSP100
108842470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
AAA_14
AAA_18
IstB_IS21
TniB
Zeta_toxin
AAA_7
RNA_helicase
Mg_chelatase
AAA_28
NACHT
AAA_25
AAA_24
ResIII
ABC_tran
NBD_SMAX1
Torsin
Motif
Other DBs
NCBI-GeneID:
108842470
NCBI-ProteinID:
XP_018470892
UniProt:
A0A6J0MEM1
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All DBs
Position
2:complement(28108080..28112053)
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AA seq
967 aa
AA seq
DB search
MATTATAAFSSVVGVGSETRKVSPFYHLQPSVAFPAKPSSFKSLKLKQSARLTRRRLEHR
PFVVRCEASSNGRLTQQEFTEMAWQSIVSSPDVAKENKQQIVETEHLMKALLEQKNGLAR
RIFSKIGVDNTKVLEATEKFIQRQPKVYGESAGSMLGRDLEGLFERARKYKKDLGDSYVS
VEHLVLAFAQDKRFGKQLFKDFQISEKSLKTAIESIRGKQSVIDQDPEGKYEALEKYGKD
LTAMAREGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGD
VPQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLKEVTDSEGQIILFIDEIHTVVGAG
ATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTV
SILRGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITS
KPTALDELDRAVIKLEMERLSLTNDTDKASRERLSRIETELLSLKEKQAELTEQWEHERS
VMSRLQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLNEAEKELDEYLSSG
KSMFREEVLGSDIAEIVSKWTGIPVSKLQQSERDKLLHLEEELHRRVVGQNPAVTAVAEA
IQRSRAGLSDPGRPIASFMFMGPTGVGKTELAKALASYLFNTEEALVRIDMSEYMEKHAV
SRLIGAPPGYVGYEEGGQLTETVRRRPYSVILFDEIEKAHGDVFNVFLQILDDGRVTDSQ
GRTVSFTNTVIIMTSNVGSQYILNSSDGGDDGKELGYETIKQRVMDAARSIFRPEFMNRV
DEYIVFQPLDRDQINSIVRLQLARVQKRIADRKMKIEITDAAVDLLGSLGYDPNYGARPV
KRVIQQNIENELAKGILRGDFKEEDGILIDTEVTAFSNGQLPQQKLIFKKIESETADAGK
EEEAFSK
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgactgccacggcggcgtttagtagcgtggtcggcgttggatctgagacccga
aaggtttctcctttctaccatctccaaccttccgtggcttttccggcgaagcccagttcc
ttcaaatcactgaagctaaagcagagcgcgaggctcacgcggaggaggctcgagcatcgg
ccgttcgtcgtccggtgcgaagcttcttccaacggaaggcttacacagcaagagttcaca
gagatggcgtggcaatcgatagtttcttcaccagatgtggctaaagagaacaagcagcag
attgtggagacagagcatttaatgaaagctcttttggagcagaagaacggtttagctcga
aggatcttctctaaaatcggtgtggataacactaaggttctagaagctacagagaagttc
attcaacgccaaccaaaggtgtatggagaatctgctggttcgatgttggggcgtgatttg
gaaggtctgtttgagagagcaagaaagtataagaaagacttgggagactcttatgtctcg
gtggagcatttggttcttgcttttgctcaagacaagcggtttggtaaacagctgtttaag
gattttcagatatctgagaagagcttgaaaactgctattgagtccatcagagggaaacaa
tcagtcattgaccaagatccggaaggtaagtatgaggcgttggagaagtatggaaaagat
ttgacagcaatggcgagagaaggaaagcttgaccctgtgattggaagggatgatgagatc
cgtagatgcattcagattctctcaaggagaacaaagaacaaccctgtgttgattggtgaa
cctggtgttggtaaaaccgcaatttcagaaggacttgctcagaggattgtgcaaggagat
gtacctcaagcgctgatgaacagaaagttgatatctctagatatgggtgcacttattgct
ggagcaaagtatagaggagaattcgaagatagactaaaggctgtacttaaggaagtcaca
gactcggaaggccaaatcattttgttcatcgatgagatccacactgttgtcggtgcaggt
gcaactaatggggcgatggatgctggtaatctactaaagccaatgcttggtcgtggcgag
ctaagatgcatcggtgctacaacgcttgacgaatacagaaagtacatagagaaagatcca
gccttggaacgtaggtttcaacaggtttacgtcgatcaacctaccgtcgaggacacggtt
tcgatcctccgtggtttgcgagagaggtacgaacttcatcacggagttcgcatctccgac
agtgctctagttgaagctgctatcctctctgaccgttacatcagtggccgctttttacct
gataaagcaatcgacttggttgatgaagcagcggcaaaactgaagatggagatcacttca
aaacccacagctctcgacgagctcgaccgcgcggtgataaagctcgagatggagaggcta
tccctaaccaacgacacagacaaagcctccagagaaaggctgagccggatcgagacagag
ttgttatcactaaaggagaagcaagccgagttaacagaacagtgggagcacgaacggtcc
gtcatgtcccgtctccagtccatcaaagaggagatcgacagagtgaacctcgagatccag
caggcggagcgggagtacgacctaaaccgcgctgcagagctcaaatacgggagcctgaac
tcgctgcagagacaactaaacgaagctgagaaagagctcgacgagtacttgagctccggg
aagtcgatgttcagagaagaggtgttaggcagcgacatagctgagatagtgagtaaatgg
acaggcatccccgtgtccaagctccagcagtcagagagagataagcttctccacttggaa
gaggagctgcacagacgcgtggtcggtcagaatccagctgtgactgcagtagccgaagcg
atccaacggtcgagagccggtctgtccgatccaggccgtccgatagccagcttcatgttc
atgggaccgacgggtgtcggcaaaaccgagctggccaaggccttagcttcttacctcttc
aacacggaggaagctctggtgaggatcgacatgagcgagtacatggagaaacacgccgtg
tcgagactcatcggagccccgcccggatacgtcggttacgaggaaggagggcagcttacc
gagacggtcaggaggaggccttactcggtgatcctgtttgacgagatcgagaaggctcac
ggagatgtgttcaacgtgtttctacagatcttggacgatgggagggttactgactctcag
gggcgtacggtgagtttcaccaatacggttattatcatgacctcgaacgttggctcgcag
tatatcttgaacagtagtgatggtggtgatgatgggaaggagctcggttatgaaacgatt
aaacagagagtgatggatgctgccagatcgatctttcgtcctgagtttatgaatagggtt
gatgagtatatagttttccagcctcttgaccgtgaccagatcaacagcattgtccggtta
cagcttgctcgtgtgcagaagcggattgcagataggaaaatgaagatagagatcactgat
gcggcggtggatcttcttggaagcctcgggtacgatcctaactatggagctagacctgtg
aagcgtgtgatacagcagaacatcgagaacgagcttgctaaaggtatcttgagaggagat
ttcaaggaagaagatggcattttgattgatacggaggttactgcgttctctaatggtcag
ttacctcagcagaagctcattttcaagaagattgagtcggaaacagcagatgctggaaaa
gaagaagaagctttctcaaaatag
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