Raphanus sativus (radish): 108847845
Help
Entry
108847845 CDS
T06014
Name
(RefSeq) general negative regulator of transcription subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108847845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108847845
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108847845
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108847845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
108847845
NCBI-ProteinID:
XP_018476701
UniProt:
A0A6J0MYF1
LinkDB
All DBs
Position
3:complement(24378794..24384395)
Genome browser
AA seq
845 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNVNQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQSLVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVSELESQIDSFEAELEGLSVKKGKSRPPRLTHLETSITRHKD
HIIKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQDDFDDFCDVDELYSTLPLDEVEG
LEDLVTAGPLVKGTPLSMKSSLAASASQVRSISLPTHHQSSSQEKTDDTALPDNSETPPK
TPPQKNGALHSAPSTPVGGRPSLNVPVNSVPNAPVALSTSIPVHTSTESMGSLSPVAAKE
EDATTVPSRKPPSSVADAPTRGIGRVNIPNQPQPSQPLSPSPANGARMTATSAAEVAKRN
IMGVESNVQPLTSPLSKMVLPPPAKGNDGAVSDSNPGDVAASIGRAYSPSTVSGSQWRPG
SPFQSQNETVRGRTEIAPDHREKFLQRLQQVQQGHGNLLSMASLSGGNEKQFSSQQQNPL
LQQSSAMSPHGGSGIQAPGFNLMSSGSLQHSSNAMTQQFGQQPSVADVDHARIDDQLQQN
LPEDSTTIAASKTIPNEDESKGLFDNPSGMPSYMLDQVQAIRDGPDFSPGQPIQPGQPSS
SHGVIGRRSNSELGAIGDPSALGPPMNDQMHNLQMLEAAFYRLPQPKDSERPRPYTPRNP
AVTPQSFPQTQAPIVSNPLFWERLGSDAFGTEPLFFAFYYQQNSYQQYLAAKELKKQSWR
YHRKFNTWFQRHKEPKIATDEYEQGAYVYFDFQTPKDENQEGGWCQRIKNEFTFEYSYLE
DELAV
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgagtcggaaactgcaaggcgagatagatcgggtgctgaagaaggttcaggaa
ggcgttgatgttttcgacagcatctggaacaaggtatatgatacggataatgttaaccaa
aaggaaaagtttgaggctgacttgaagaaggagatcaagaagttgcagcggtatagggac
cagatcaagacttggattcagtctagtgagatcaaagataaaaaagtcagtgcatcatat
gagcaatctctggttgacgctcggaagctcattgagcgagaaatggagaggtttaaaata
tgtgagaaagagaccaagacaaaagcattctccaaggaaggactgggtcagcaacctaaa
actgacccaaaagagaaagcaaagtcagaaacaagagattggttgaacaatgtggtgagt
gaactcgagtcgcagattgatagctttgaagctgagttggaaggactatctgtcaaaaaa
gggaagtcaaggccgcccagattgacacatcttgagacatctattacaaggcacaaggat
catataataaagttggaattgatattgaggcttctggacaatgatgaattaagtccagaa
caagtaaatgacgtcaaagattttctggatgattatgttgaacgaaatcaggatgatttt
gacgatttttgtgatgttgatgagctctatagcacgttgccactagatgaggtggagggt
cttgaagatctagttactgctggccccctcgtcaagggtactcctctgagcatgaagagt
tctttggcagcgtcagcatctcaagttcggagcataagtttaccaacacaccatcagagt
tcttctcaagagaagacagatgatacagctttaccggataattctgagacacctccaaaa
acccctccccaaaagaatggggcccttcactcagcaccatcaacacccgttgggggacgt
ccaagtttgaatgtgcccgtcaatagtgttccaaatgcaccagttgccttatcaacttcc
attcctgttcatacttccacagaaagcatgggaagtttgtctccagtggctgccaaggaa
gaagatgcaacaaccgtgccttcccgtaaaccaccctcatctgttgctgatgctccaacg
aggggaataggtagagttaatatccccaaccagccccaaccaagtcagcctctgtctcca
agtcctgctaatggagctcgcatgactgctacttcagcagctgaagttgcaaagagaaat
ataatgggagttgagagcaatgtccaacctctaacctctccgctcagcaaaatggtattg
ccaccccctgcgaagggtaatgatggagctgtctctgatagtaaccctggtgatgttgcc
gccagtatcggtagagcatattcaccgtctactgtatctggttcgcagtggaggcctggg
agtccctttcagagtcagaatgaaacggtccgtggaagaactgaaatagcaccagatcac
agggagaaatttctacagcggttacaacaagtacaacaaggccatggtaacctcttaagc
atggcttctctatccggaggaaacgagaagcagttttcttcacaacagcaaaatccgctc
ttacagcagagctctgccatgtctcctcatggtggctcgggaattcaggcgccaggattt
aatcttatgagttctggctccttacagcactcgtcaaatgccatgactcaacaatttggt
cagcagccttctgttgcagatgttgatcatgccagaattgacgatcagctgcaacaaaac
ttacctgaggattcaactaccatagcagcttcaaaaactattcctaatgaggatgagtct
aaaggtctatttgataatccgtcgggaatgcccagctacatgttggatcaagtacaggca
attagggacggccctgatttttctcctggacaacccatacaacctggccaaccttcaagt
agccacggggttattggacgtagaagtaactctgaactaggagctattggtgacccctca
gctttagggccaccaatgaacgatcagatgcacaatctccagatgctcgaagctgctttc
tatagacttcctcaaccaaaagattcagaacgtcctagaccctatactccgaggaaccca
gcagtcacacctcaatcgtttccccaaacacaagcgccaatcgtaagcaaccctttgttc
tgggaacgtttaggaagcgatgcttttggaaccgagcctttgttctttgcattttactat
cagcagaactcgtatcagcagtatctagctgcaaaagagctgaagaaacagtcatggaga
taccacagaaagttcaacacatggtttcagagacataaggagccaaagattgcaactgat
gagtatgaacaaggagcctatgtttactttgatttccaaaccccaaaagacgagaatcaa
gagggaggatggtgccaaaggatcaaaaacgagttcacgtttgaatacagttatcttgaa
gatgaactcgccgtatag
DBGET
integrated database retrieval system
