Raphanus sativus (radish): 108861406
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Entry
108861406 CDS
T06014
Name
(RefSeq) pumilio homolog 4
KO
K17943
pumilio RNA-binding family
Organism
rsz
Raphanus sativus (radish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
NABP
DUF3574
pEK499_p136
Motif
Other DBs
NCBI-GeneID:
108861406
NCBI-ProteinID:
XP_018490764
UniProt:
A0A6J0P277
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All DBs
Position
5:38124649..38129402
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AA seq
986 aa
AA seq
DB search
MFSDRRSNMNRGGSNVDLDDRFQRELESLLQQHRDRHQTFGSQRDVVDVHRSGSAPPTVE
GLLRAMDNQYLNNNTNDYIRDAANNVGGVELLSDDELRWHPAYLSYYYSNEHSNPRLPPP
LLSREDWRVAQRFHNGETVFDPVGEWRKKGENSNNNSNNNNSSSLFTVQPGVEQAESDLM
ELRNAVAQGRSQKTPVQRLDPGLGPRRKSFADILQEGLDRDAALRSQLSRPASCNTFRDM
NDPAVLSNFSPGGFDSPLAFHESLHSAGQNTANAMLGSSMSSPVPRNRTPESHLVGRASA
SGLPPIGTRVGPVEKKNMFGSAIHTAADVTDTLSRLNMSEMNQLNDNHVHSQLQVELENQ
SDVMRYIPNGHKKALRQQGIAMPESNDQLFSANYGGIMSGYGTGIGASTVSSHGQVNIPK
RASSSASLYSTSDRSRLGSLGLSDVNIQNANIKGTDFSTSGGYLVNNKLNSLAELYSGEG
SHLTGEGDRQSLNRLINQAASELHSPVMDPHYSQYRHTASATGAPSEHPLLRNNLGTLNG
DTSNEYLAMLLAQQRHQLGNLSAANSRLYENPPYDLGSMYLGNHLPSPSKNSRNLQNMRM
SQSAASMMKIPLGGLQGSSHVDIGSTTETSLLEGFKNNKTRSLELSEIVGHVIEFSMDQY
GSRFIQQKLETATDEEKNAIFPEILPIGRTLMTDVFGNYVIQKFFEHGTNKQRKELAEQV
TGHVLALSLQMYGCRVIQKALEVVDVEQQTRMVQELDGSVLKCVHDQNGNHVIQKCIERL
PQDCIQFIISSFYGKVLTLSTHPYGCRVIQRVLEHIDDVETQRIIMGEIMNSVCTLAQDQ
YGNYVIQHIIQHGKPHERTEIINKLAGQIVTMSQQKFASNVVEKCLTFGGPEERQVLVNE
MLGYTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLALIISRIKVHLNALKRYTYGKHIV
ARVEKLITTGERRIGLSSSLAANTSP
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgacaggagatcaaacatgaaccgaggaggatccaatgtcgatctcgatgat
cgattccagagagagctcgaatctcttctccaacagcatcgcgaccgtcaccaaacattc
ggttcgcaacgcgacgtcgtcgacgtgcacagaagcggaagcgcgccaccgacggtcgaa
ggtctgttgagagccatggataaccagtacttgaacaacaacaccaacgattacatcaga
gacgctgcgaacaacgtcggcggcgtagagcttttgtccgacgacgagctgcgctggcac
cctgcgtacctctcgtattactactcgaacgagcactcgaacccgaggctgccgcctccg
ctgctgtctagagaggattggagagtcgctcagaggtttcacaacggtgagacggtgttt
gatcctgttggagagtggaggaagaaaggtgagaacagtaacaacaacagcaacaacaac
aactcctcgtcgctctttactgttcagccgggtgttgagcaggcggagagtgatttgatg
gaactgaggaatgctgttgctcagggacgatctcagaagacacctgtgcagcggttagat
ccggggcttggtcccagaaggaagagttttgctgatatacttcaggaagggcttgaccga
gacgcagcgttacgcagccaactctctcggcctgcgagttgcaacactttccgtgacatg
aatgatcctgctgtcttgtcaaattttagtccaggtggattcgacagtccattagcattc
catgagtcgttacattctgctggacagaacactgcaaatgctatgctgggatctagcatg
agttctccagtgccaaggaatagaactcctgagtcacatctagtagggcgagcttcggct
tctggtttgcctcctattggaaccagagtcggtcctgtggagaagaagaatatgtttggc
tcagccatccatactgctgctgatgttactgacacgctgtcgaggttgaacatgtcagag
atgaatcaactgaatgataaccatgtgcactcccagcttcaggtggaattggagaatcaa
tctgatgtcatgcgttacatacccaacggtcataagaaggctctgcgtcaacagggtatt
gctatgccagagtcaaacgatcagttattttctgcaaattacggtggaattatgagtggc
tatggaacaggcattggtgcttccactgtgtcttctcacggacaggtcaacatccccaaa
agagcttcctcttcagcgagtctttactcaacttcagaccgttctagattaggaagcctg
ggcttatctgatgtcaatattcagaatgctaatatcaaaggaacggacttctccacatct
ggtggttatttggtaaataacaaattgaattcattagctgagctctattccggtgaaggc
tcacatttgactggggaaggggatagacaaagcttgaatagactgataaaccaagctgct
tctgagcttcactctccagttatggacccccattacagccagtatcggcataccgcatca
gctactggtgcaccaagtgaacaccctcttcttagaaacaatttggggacgttaaacgga
gatacatctaatgaatatctcgcgatgttacttgctcagcagagacatcagctgggtaat
ctcagtgctgcaaattccagattgtatgagaatcctccatatgatcttggcagcatgtat
ctaggaaaccatttaccttctccttccaagaattcaagaaatctccagaacatgcgaatg
tcgcagtctgctgcctcaatgatgaaaattcctcttgggggattacagggatcttcccat
gtagatatcggcagcacaacggaaacatctttactagaagggttcaagaacaacaagaca
aggtctttggagctttcagaaatagttgggcatgtgattgagttcagcatggatcagtac
ggaagtcgtttcattcagcaaaaactggagactgcaacagatgaggaaaagaatgcaata
ttccctgagatacttcctattggtcgcactttaatgacagatgtctttggaaattatgtc
attcaaaagttttttgagcatggcacaaacaaacagagaaaagaactcgctgaacaagtt
actggacacgttttggctctctctctacaaatgtatggctgcagggttatccaaaaggcg
ttggaggtggttgatgtggagcagcaaactcgaatggtgcaagagcttgatgggtctgtc
ttgaaatgcgttcatgatcagaatggtaatcatgtgatccagaagtgtatagagcgtctt
cctcaggattgcatccagttcattatctcctcattttacgggaaagtcttaaccctttca
acacacccttatggatgccgtgtaatccagagggtactggagcatattgatgacgtagaa
acccaacggatcattatgggggaaatcatgaactcagtctgcactctagctcaagatcag
tacggaaattatgttattcagcatatcatacaacacggtaaaccacacgaacggacagaa
attatcaataagcttgctgggcagattgtgacaatgagtcaacagaagtttgcttctaac
gttgttgaaaagtgcttaacatttggcggtccagaggaacgccaggttctagtgaatgag
atgcttggttatactgatgaaaacgagcctcttcaggcgatgatgaaggatccattcggg
aactacgtagtgcagaaggttcttgaaacatgcgatgatcaaagccttgcactcattatt
tctcgcatcaaagtccacttgaatgccttaaagagatacacatatgggaaacacatcgtt
gcccgggttgagaaacttatcaccactggagagagaagaatcgggctctcatcatctcta
gccgcaaatacttctccttag
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