Raphanus sativus (radish): 108863467
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Entry
108863467 CDS
T06014
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00450
Selenocompound metabolism
rsz00970
Aminoacyl-tRNA biosynthesis
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
108863467
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108863467
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108863467
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108863467
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
108863467
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108863467
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108863467
Prokaryotic type
Other AARSs
108863467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Flavodoxin_2
Toprim
Motif
Other DBs
NCBI-GeneID:
108863467
NCBI-ProteinID:
XP_018493401
UniProt:
A0A6J0P9P6
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Position
5:complement(25052302..25055497)
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AA seq
610 aa
AA seq
DB search
MAARLNSSFHNALSFLNPFNTPLSKKPFSSRNSFRFSKKLASSPTRRALYSTSTLGSHEN
ADTFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSAA
ANGRNPAEHCDLISQSYRTLWKELDIAYDKFVRTTDPKHEAIVKEFYERVFANGDIYRAD
YEGLYCVNCEEYKDEKELLENNCCPVHQMPCVARKEDNYFFALSKYQKPLEEVLSQNPRF
VQPPYRLNEVQTWIKSGLRDFSISRALVDWGIPVPNDDKQTIYVWFDALLGYISALTEDN
EQQNLDTAVSLGWPASLHLIGKDILRFHAVYWPAMLMSAGLNLPKMVFGHGFLTKDGMKM
GKSLGNTLEPFELVQKFGPDAVRYFFIREVEFGNDGDYSEDRFIKIVNAHLANTIGNLLN
RTLGLLKKNCESTLVVDSTIAAEGVSLKDTVEKLVEKARTNYENLSLSTACEAVLEIGNA
GNSYMDQRAPWMLFKQGGDSAEAAAKDLVIILEVMRIIAVALSPIAPSLSLKIYSQLGFS
VDQFNSVTWNDTKWGELKGGQVMAQASPVFVRIELDAAEKDEEKKPKDSKKKGKAKVKVE
QQPQIVAEEA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaggctgaactcttcgtttcacaacgccctctccttcttaaacccattcaac
actccgctcagcaagaaaccattctcttcgagaaacagcttcagattctccaaaaagctc
gcttcttccccgacgaggagagctctctactctacttccaccctcggaagccatgaaaac
gccgacactttcgtcctcacaactcctctctattacgtaaatgcccctccccacatgggc
agtgcctacaccaccatcgccgccgattcaatcgcccgtttccagaggctgcttgggaag
aaggttatctttatcacgggaacagatgagcacggtgagaagatagctacttcagcagct
gcgaacggacgcaaccctgctgagcattgtgatctcatttctcaatcttatcgaactctt
tggaaagaactcgatattgcttatgataagttcgttagaaccactgatcctaagcatgaa
gctatcgtgaaagagttctatgaacgtgttttcgccaacggtgatatatacagagctgat
tatgaagggctttactgtgttaactgtgaggaatataaggatgagaaagagctgcttgaa
aacaattgttgccctgttcatcaaatgccatgtgttgcaaggaaagaagataactacttc
tttgctctatccaaatatcagaaacctcttgaggaagttttgtctcagaatcctcgtttt
gtgcagcctccttaccgtctaaacgaggtgcaaacttggataaagagtggattaagggat
ttttcaatttctcgagcattagtagattgggggattcctgttcctaatgatgataagcaa
accatatatgtttggtttgacgctctactaggttacatatcagctctaacagaggacaat
gagcaacaaaatcttgacactgctgtttcattaggatggcctgcttcattgcatttgatc
ggaaaggatattctaagatttcacgctgtctattggcctgctatgctaatgtctgctggt
ctgaaccttccaaagatggtgtttggccatggatttctcacaaaggatggaatgaagatg
gggaaatcgttggggaacactctagaaccttttgagctggttcagaaatttggaccagat
gctgtcaggtacttcttcatccgggaggttgagtttggaaacgatggggactactcagaa
gaccgttttataaaaattgtcaatgcacatctcgccaacactataggaaacctccttaac
cgtactcttggccttcttaaaaagaactgtgagtccactttagtagtagattccactatt
gcagctgaaggagtttctttgaaagacacagtggagaagctggttgaaaaggcacggaca
aactatgagaatctttcattatcaacggcgtgtgaggctgtgttagagattgggaatgct
ggaaactcctacatggatcaaagagcaccttggatgcttttcaaacaaggtggtgactca
gcagaagctgcagccaaggatctggtgattatactcgaagtaatgagaatcatagccgtg
gcgttatccccaattgctccttccttaagcctgaagatatattcacagcttggcttctca
gttgatcagttcaacagcgtaacatggaatgacaccaagtggggagagctaaagggaggt
caagtaatggcgcaagcgagtcctgtttttgtaaggatcgagctggatgcagcagagaaa
gatgaagagaagaagccaaaggatagtaagaaaaagggtaaagctaaggtcaaagtagag
caacagcctcagattgtagcagaagaagcttag
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