KEGG   Raphanus sativus (radish): 130494249
Entry
130494249         CDS       T06014                                 
Name
(RefSeq) uncharacterized protein LOC130494249
  KO
K12825  splicing factor 3A subunit 1
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130494249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    130494249
Spliceosome [BR:rsz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    130494249
 Complex B
    130494249
 Complex C
   U2 SnRNP specific factors
    130494249
SSDB
Motif
Pfam: Surp
Other DBs
NCBI-GeneID: 130494249
NCBI-ProteinID: XP_056858907
UniProt: A0A6J0M5Z5
LinkDB
Position
2:complement(28404279..28407903)
AA seq 847 aa
MATKRQEKTSFIKDVARLVSQKGLETEKTLVALNKDNGEKFSFLLRSDPYHAYYQDKLNY
YRKEVAQVTSRPHAPPATASHNCSVADDGEEEAFCLLPTYSTLWSSSFSRPPGISLKDLY
IMKLTAQFIARYDMHFLRALKEHVAQNPKPQFDFLKPTSSRFKFCGGLVRGYASVIRPYI
ESLMRDGGGIMPLVLPPGECWTRYDDYDDMPLCLQFFFDRLQLEKLEAGDEMALIDLHAF
VSGVDFFAQRDNDAFATVMSTTPHLSKMMYEWPQMQPSKLVSDDDTEPELIDAPRSYEIL
EKQLTLKELGIIKLTAMFVARYGSEFRRDLMEVVLMNPLFEFLQPSDCKCSKFFSSLVRV
YSTVIMPSDKLWYGDDSTAFALEFFSRTLQLEKLENGDETAAIDLHALVGGVDCFSHMSE
SLFLAFAPQPEHLSTMVKRRGCQLLTEFHKADDENLDGTDQPDGVARPYRFKSSFKFPEK
GITVRELGVIMLTAQFVQRYGEKFRLGLRRRVVMNTQFGFMVFGDRRHYFYCGLLCAYRS
VLRPCKRMKRSAAYTDTVLDMFFEILQSQEGERIGLHDFVGLVDWFAHVEEEYYSVVVPA
PVHVLMNMIPPTLRLPNTLLLPPMKPSVTHDPAQRRHDHLASPAGRSTLREEYIIKVTAQ
FVVRYGTSFERALRRRVAETPKFEFMKPTGRKFRLYASCVEGFAQVLEPCKKRVDCMDTV
LEGLFCFLDREHEEAVGIGLHGFVDVVDCFASMDHVVPQCLIPPGCQVHLGQPSTGMMKQ
PAPPTLGVMSSRRPLPEEPEPMRKRGKKRERQESALDPQDHSHAKHPRLSTTITVFVPNV
GEVKVAG
NT seq 2544 nt   +upstreamnt  +downstreamnt
atggctacaaagcgacaagagaagacaagttttatcaaggatgttgctcggttggtttcc
caaaagggtttggagactgagaagacgctggtggcccttaataaggataatggtgaaaaa
tttagctttttgttgaggtcagacccttatcacgcatactaccaggataagcttaattat
taccgtaaggaggtggctcaggttaccagcaggcctcatgctcctccggctactgctagt
cataattgctctgtagctgatgatggtgaagaagaagccttttgtctgttgcctacttat
agtactctgtggagtagttcgttcagtcgtcctcctggtatctcactcaaggatttatat
atcatgaagctcactgctcagtttatagcgcggtatgacatgcactttctgcgagctttg
aaggagcatgtggctcagaatccgaaacctcagtttgattttttgaagccgactagtagc
aggtttaagttctgtggtgggcttgttcgtggttacgccagtgtaataaggccatacata
gaatctctgatgagagatggtggtggcattatgccgttagtgctgccacccggtgagtgt
tggacgagatatgatgattatgacgatatgccgctctgtcttcagtttttcttcgaccgt
cttcaattggagaagctggaggctggggatgagatggctctgatcgacttgcatgctttc
gtgagtggtgtcgacttttttgcccagagggataatgacgcctttgctactgtcatgtca
acaactccacacctttcgaagatgatgtacgaatggcctcaaatgcagccatcgaagctt
gttagtgatgatgatacagaaccagagctaatagatgcacctcgttcatatgaaatcctg
gagaagcagctcacgctcaaggagctgggtattattaagctgacagcgatgtttgtggct
cggtatggctcagaatttcggcgggatttgatggaggtagtcttgatgaaccctctgttt
gagtttctgcagccaagtgattgcaagtgttcaaagttcttcagctcgcttgttagagtg
tattccactgttataatgccttccgacaagttgtggtacggtgacgattctacggctttc
gcccttgagtttttctcccgcactctccagctggagaagctcgaaaacggagatgagacg
gctgctattgatttgcatgcgcttgtgggtggagttgactgttttagtcacatgagtgaa
agcctctttcttgctttcgctccacaacctgaacacctttcgactatggtgaaacgacgg
ggatgtcagcttcttactgaattccataaggctgatgatgagaatctagatggaactgat
caacctgatggagtagctcggccttaccgtttcaaaagtagttttaagttccctgaaaag
gggatcacagtcagggagcttggtgttattatgctcacagcacagttcgtgcagcggtac
ggggagaagttccggctgggtttgaggaggagagttgttatgaacactcagtttgggttt
atggtctttggtgacaggaggcactatttctattgcggccttctttgtgcgtatagaagt
gtattaaggccctgcaaaaggatgaagaggagcgctgcgtatacagataccgttcttgac
atgtttttcgagattctccaatcgcaggagggggagagaattggtttgcatgattttgtg
ggtcttgttgactggtttgctcacgtggaggaggaatattattctgttgtggtgccagca
cctgtacacgttttgatgaatatgatcccaccaacactcaggctgcctaatacgcttttg
ctgcctccaatgaaaccttcagttactcatgatcctgctcaaagaagacatgaccatctt
gcatctcctgctgggcggtccacactccgggaagagtatattattaaggtgacggcgcag
tttgtggtgcggtatgggacgagttttgagcgagctttgaggaggagagtggctgagaca
cctaagtttgagtttatgaagccgactggtagaaagttccgtttgtatgcaagttgtgtt
gaggggtttgcacaagtattagagccttgcaaaaaacgtgttgattgtatggacacagtt
cttgagggtttgttctgttttctggatcgtgagcatgaggaggcagtgggcatcgggttg
catggttttgtggatgttgtggattgttttgcttccatggatcatgtggtgccacaatgc
ctcattccaccgggatgccaagttcatcttggtcagccttcaacggggatgatgaagcaa
cctgcaccaccaacactgggtgtaatgtcatctcgtcgtcctctacctgaggaaccagag
ccaatgaggaagagaggcaaaaagagggagagacaagagtcagctcttgatccacaagac
cattctcatgctaaacatccgcgtttgtctactacaatcacggtatttgttccaaacgtc
ggtgaagttaaagtagctgggtga

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