Raphanus sativus (radish): 130495934
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Entry
130495934 CDS
T06014
Name
(RefSeq) syntaxin-32-like isoform X1
KO
K08490
syntaxin 5
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130495934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
130495934
Membrane trafficking [BR:
rsz04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
130495934
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Prominin
Motif
Other DBs
NCBI-GeneID:
130495934
NCBI-ProteinID:
XP_056843554
UniProt:
A0A6J0JE61
LinkDB
All DBs
Position
6:9225285..9226939
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AA seq
346 aa
AA seq
DB search
MQARHVQSSYRDRTDEFSGIVESRRRSIAPTAANNAPYGSGGRREDPRSAAANQSEFSKR
ASLIGLAIHQTSQKLSKLAQLAKRSSVFDDPTREIQELTVVIKQEISGLNGALLDLQAVR
NNNSHDNDERSISRDTTSHSATVVDDLKNRLMDTTKEFKDVLTLRTENMKIQEDRMKKFS
KISSKESANPFVRQRPLASKPSPSQPAPLPWANGSSSSSSQLVPSRQGEAESSPLLQQSQ
QQQQQQQQMVPLQDTYMQNRAEALHNVESTIHELSNIFTQLATMVSQQGEIAIRIDQNME
DTLANVEGAQSQLTRYLNSISSNRWLMIKIFFVLIAFLMVFLFFVA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaaggcatgtgcaatcctcgtatcgagatcggacggacgagttctccggtatc
gttgaaagtcgtcggagatcgattgctccaacggcggcgaataatgcgccgtacggtagt
gggggaagaagagaggatccgagatctgcggcggcgaatcaatcggagttcagtaagaga
gcttctctgatcggtttagctatccaccagacgtcccagaagctatccaagctcgctcaa
ctggcgaagaggtcgtcagtgtttgatgatccaacgcgggagatacaagagctgacggtt
gtgatcaaacaagagatctctggtctaaacggcgctttactcgaccttcaagctgtacgc
aacaacaactcccatgataacgatgaaaggagcatctctagagacaccactagtcactct
gcaactgttgttgacgatctcaagaatcgcttgatggacactaccaaggagtttaaggat
gttcttactttgagaactgagaacatgaagatccaagaagatcgaatgaaaaaattctcg
aaaatctcttcgaaagaatcagcaaatccgtttgttcggcagcgccctttggcttctaag
ccttcacctagtcaacctgctcctcttccatgggcaaatggttcttcttcttcttcgtct
cagttagtcccaagtaggcagggagaggccgaatcctcaccactattgcaacagagtcaa
caacaacagcagcagcagcagcagatggtcccgttgcaagacacatatatgcaaaaccga
gcagaagctctacacaatgtagagtcaacaatccatgagctaagcaatatcttcacacaa
ctagcaaccatggtgtctcagcaaggggagatcgctatcaggatcgatcagaacatggaa
gatacgttggcgaatgtggaaggcgcacagagccaactgactaggtatctcaacagtata
tcgtctaaccggtggctcatgattaagattttcttcgtactgattgcttttctcatggtt
ttcctcttcttcgttgcgtga
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