Raphanus sativus (radish): 130495952
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Entry
130495952 CDS
T06014
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-1-like
KO
K03265
peptide chain release factor subunit 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130495952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
130495952
03012 Translation factors [BR:
rsz03012
]
130495952
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130495952
Translation factors [BR:
rsz03012
]
Eukaryotic type
Release factors
130495952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
DUF7015
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
130495952
NCBI-ProteinID:
XP_056843606
UniProt:
A0A6J0JSG3
LinkDB
All DBs
Position
6:16099612..16101402
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AA seq
432 aa
AA seq
DB search
MGDNQHDDKSIEIWKMKKLIKSLEAAKGNGTSMISLIMPPRDHISRVTKLLCGEYGTASN
IKSRVNRLSVLGAITSAQQRLKLYNRVPPNGLVLYTGTVVNDQGKEKKVTIDFEPFRPIN
NTLYLCDNKFHTEALNELLESDDTFGFIVMDGKGTLFGTLTGSTSDVLHKYTVDLPKSHG
RGGQSALRFERLGSEKRQNYLRKTAELATQYFINASTNQANVSGLVLAGSAEFKTKLSQS
GMFDPRLKAKILNVVEVQHGGERGFNEAIKKSSEVLANVKFAQEKLLIGKYFNEVNQGTG
KYAVGVENTLSALDAGAVETLIVWENLDINRYVLKNKVTGETVIKHLNKEGEVSSDFDVE
DKVLMLEWLANEYKGFGCALVFVTNKSQEGDRFCKGLGGIGGILRYQLDVAVFDEAEYLD
VSDDDESESESE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaatcaacacgacgacaagagcattgagatttggaagatgaagaagctgatc
aagtcccttgaagctgctaagggtaacggaaccagcatgatctcactcatcatgcctcca
cgtgatcatatctctcgtgtcaccaagctgttgtgcggtgagtacggaaccgcgtcaaac
atcaagagcagagtcaaccgcctttctgtcttgggagccattacttccgcacagcaaagg
ctgaagctttacaacagggtccctcccaatggtctagtcctctacaccggcaccgtggtc
aacgaccaaggcaaggagaagaaggttactattgactttgagcctttcaggcccatcaac
aacactctttacctatgtgacaacaagttccacaccgaagctcttaatgaactgctggag
tcggatgacacgtttggtttcattgtaatggatgggaaggggactctctttggaactttg
actggtagcaccagtgacgtgcttcacaagtataccgtcgatttaccaaagagtcacgga
agaggagggcaatcagctcttaggtttgaacgtctgggtagcgagaaacgccaaaactac
ctgaggaaaacagctgagctcgccacgcagtacttcatcaacgcttcaacaaaccaggct
aatgtctctggtctggtacttgctggttcagctgagttcaagaccaagctaagccagtca
ggtatgtttgatccccggcttaaagctaagatacttaacgtggtggaggttcagcacggg
ggagagagaggtttcaatgaggctatcaagaagtcatctgaagttcttgcgaatgtgaag
ttcgctcaagagaagcttttgataggaaagtactttaatgaggtgaaccagggcacgggg
aagtatgcggttggcgtggagaacacgttaagcgctttggacgctggtgctgttgagacg
ctgatcgtatgggagaatcttgacatcaacagatacgtgttgaagaacaaagtgactggc
gagactgtgataaagcatcttaacaaggaaggtgaagtcagtagtgattttgacgtggag
gacaaggtgttgatgctagagtggctggctaacgagtacaaaggttttggttgtgcgtta
gtgtttgtaaccaacaagtcgcaggaaggggatcggttttgcaaagggcttggaggaatt
ggagggatacttcgttaccagcttgatgtggctgtctttgatgaagcagagtatttggat
gttagtgatgatgatgagtctgagtctgagtctgagtag
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