Raphanus sativus (radish): 130496024
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Entry
130496024 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC130496024
KO
K12869
crooked neck
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130496024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
130496024
03036 Chromosome and associated proteins [BR:
rsz03036
]
130496024
Spliceosome [BR:
rsz03041
]
Complex B
Other components
Prp19-related factors
130496024
Complex C
130496024
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
130496024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
NRDE-2
HAT_Syf1_M
U3_assoc_6
Mad3_BUB1_I
TPR_9
Glycos_transf_N
Motif
Other DBs
NCBI-GeneID:
130496024
NCBI-ProteinID:
XP_056843739
UniProt:
A0A9W3BWW1
LinkDB
All DBs
Position
6:12407063..12409172
Genome browser
AA seq
679 aa
AA seq
DB search
MASFVKDTQVKLPRPTRVKNKTPAPLQITAEQLLREARERQEPDQFLPPQQNITDSAEFS
DYKLRRRKEFEDRIRRPRPPIYVWLNYAGWEESLKDYARARSVWERALQGDYKNYSLWLK
YAEFEMRNKFVNSARNVWDRAVTVLPRVDQLWYKYAHMEEMLGNIGGAREVFERWMKWSP
DQQGWLSFINFELRYKETERARDVYERFVLCHPKASSYIHYAMFEVKGGEVARAREVYER
AVKNLGDCDEEIFVAFGEFEERCNEVERARDIYKFGLDRVGRGDELYRKFLEFEKQYGDK
EGIDDVIVRKRRSEYEDQVRKNPLNYDAWFDYIRLEEEEGSVGDKERVREVYERAIANVP
LANEKRYWRRYIYLWVNYALYEEIQAEDVERARQVYRECLKLVPHASFSFAKIWLLAAQF
KIRQLNITAARKILGNAIGIAPNKDKIFKEYIEIELQLGEIDRCRRLYQKYLEWSPEKCY
VWCKFAKFERSLEEIERARGIFELAVAQHALDLPELVWKAYIDFEMSQGEVERTRALYER
LLERTKHYKVWVSFATFEAGEQEEGDIERKRECIRRTRAVFDRAYMYYKDLTPELKEERA
KLLEDWLKMEVSFGMLGDVSIVESKLPKKLKKRKSITGEDGSVEYVEYTDYLFPEELQTL
NLNILEAAYRWKKQKVNSV
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttcgttaaagatacacaagtgaagctaccaagaccaacgcgagtcaagaac
aagaccccagcaccgctccaaatcacagccgagcagctcctaagagaagctcgagagaga
caagaacctgatcagttcctgccacctcagcagaacatcaccgactcagccgagttttcg
gactacaaactccgccgtcgcaaggagttcgaggaccgtatccgccgcccaagaccacct
atctatgtatggttaaactacgcaggctgggaagagtctctgaaagattacgcacgtgcc
agaagcgtgtgggaacgcgccttgcaaggagactacaagaactattcactctggctcaag
tacgcggagttcgagatgaggaacaagtttgtaaactccgcaagaaacgtctgggaccga
gccgtcacggttctaccgcgcgtggaccagctttggtacaagtacgcgcacatggaggag
atgcttgggaacatcggtggagctagagaggtgttcgagcggtggatgaagtggtcgccg
gatcaacaaggctggctctcgtttattaacttcgagcttcggtacaaagaaaccgaacgc
gcaagagatgtctacgagaggtttgttctttgtcatccgaaagcgtcttcttatattcac
tacgcaatgtttgaggtgaagggaggtgaagtcgcacgcgcgagggaagtgtacgaacgc
gccgttaagaatcttggagactgcgatgaagagatctttgtagcctttggtgagtttgaa
gaacgttgcaatgaagtggaacgtgctagggatatctacaagtttggtcttgatcgtgta
ggaagaggagatgagctgtacagaaagtttctggagtttgagaaacagtatggggacaag
gaaggtatcgatgacgtcattgttaggaagagaaggtctgagtacgaggatcaagtgagg
aagaaccctttgaactatgatgcgtggtttgattacattaggttagaggaagaggagggt
tccgtgggggacaaggaaagggtcagagaagtttacgagagggcgattgctaatgttcca
ctggctaatgagaagcgttactggagaagatacatttacttatgggttaactatgctttg
tatgaagagattcaagctgaagatgtggagcgtgcacggcaagtatacagagaatgtctg
aagcttgtcccacacgcaagcttttctttcgcgaaaatatggctgctcgctgcacagttt
aagatcaggcagttgaatatcaccgctgctcggaagatactagggaatgctattggtatt
gctccaaacaaggacaagatcttcaaggagtatatcgagatcgaacttcagctgggagag
attgatagatgcaggagactataccagaagtatctcgaatggtctcctgaaaagtgctac
gtgtggtgcaagtttgcaaagtttgagaggtccctcgaggaaatagaacgagcaagaggt
atattcgagcttgcggtagctcagcatgctctcgacttgcccgagttggtgtggaaagct
tatattgactttgagatgtcacaaggggaagtagagaggacacgtgctttgtatgagaga
ctcttggaacgtactaaacattacaaggtttgggttagttttgcaacatttgaagctggt
gaacaagaagaaggtgatattgaacgcaaaagagagtgcatcagacgcactagagcggtt
tttgaccgagcctacatgtattacaaagaccttacaccggagctgaaggaagaaagggca
aagctgttggaggattggcttaagatggaagtgagctttggtatgctcggggatgttagc
attgtagagtcaaagctccctaagaagctcaagaagaggaagtcaataaccggagaagac
ggttcggtagagtatgttgaatacactgattacctgttccctgaagagttgcagactttg
aacctcaacattcttgaagctgcttatagatggaagaagcagaaggtcaattctgtgtga
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