Raphanus sativus (radish): 130508276
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Entry
130508276 CDS
T06014
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 4
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130508276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
130508276
Membrane trafficking [BR:
rsz04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
130508276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Pox_T4_C
Motif
Other DBs
NCBI-GeneID:
130508276
NCBI-ProteinID:
XP_056859677
UniProt:
A0A9W3D7G1
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All DBs
Position
2:38046170..38052732
Genome browser
AA seq
1711 aa
AA seq
DB search
MSTSQTLGGATRCGRVIGPSLDKIIKNAAWRKHTYLVSSCKSVLDRLESLPDDTHDPTSV
VSGLSSTDADSVLQPFLFSLDTAYSKVVEPALDCAFKLFSLSVIRGEIQSSKQDSVLFKL
VNAVSKVGAMAEEPIQLAVLRVLLAAVRSPSVLIRGDCLLHVVKTCYNIYLGGLSGTTQI
CAKSVLAQMMLVIFTRSEEDSLDVTVKTVYVNELLTYTDKSVNEGSSVYFCQGFVNEVMA
AGQGSPLPPPDVIQILLQNPETETVMTPDSPSFRGYEKNNNGDNADSLTGGDMSKMRQDA
FLLFKNLCKLSMRFSSQEKNDDQIMVRGKTLSLELLKVIIDNGGPVWRSNESFINAVKQY
LCLSLLKNSAVSIMSIFQLQCAIFMSLLSKLRSVLKSEIGIFFPMIVLRVLENVLQPSFL
QKMTVLNLLEKMSQDPQLIVDIFVNYDCDVDSSNILERIVNGLLKTALGPPTGSSTTLSP
AQDSTFRNESVKILVNLVKAMGNWMDQQLKVNETVWPKGSQLYASMDSSNASQIGEEVTI
SDSDSQPDTNPEAYDASMLEQRKAYKIELQKGISLFNRKPSKGIEFLINSKKIGNSPEEV
ASFLMKTAGLNGTVIGDYLGEREELPLKVMHAYVDSFNFQGKDFVEAIRFFLRGFRLPGE
AQKIDRIMEKFAEHYWKCNPASFTSADTAYVLAYSVIMLNTDAHNNMVKDKMSKADFVRN
NRGIDDGKDLPEEYLGSLYDRVVKDEIKMNSDTLAPQSKQVNGLNKLLGLDGILNLVSWM
QPDEKAHGANRMLIRDIQEQFQAKSEKSESVYHSVTDVSILRFILEVSWGPMLAAFSVTL
DQSDDRLATSLCLQGFRYAVHVTAVMGMQTQRDAFVTSMAKFTNLHCAADMKQKNVDAVK
AIITIAIEDGNHLQGSWEHILTCLSRIEHLQLLGEGSLPADARHIPTTKAEVDEKKALGF
PHLKKRGALQNPSVMAVVRGGSYDSTSLVKTVPKLVTPEQIKNFIANLNLLDQIGNFELN
HVYANSQRLNSEAIVAFVKALCKVSMSELQSPEDPRVFSLTKLVETAHYNMNRIRLVWSR
IWNVLSDFFVSVGLSESLSVAIFVMDSLRQLSMKFLEREELANYHFQHEFLRPFVVVMQK
SSSAEIRELIVRCVSQMVLSRVSNVQSGWKSVFTVFTTAAVDERKNIVMLAFETIEKIVR
DHFHCITETEISVYADCIRCLITFTSSKFEGDIGFNTIEFLRFCASKLAEGGLFLNEKLK
NDNISAFKEDSSDGQSVTTDLDEQVSYWVPLLSGLSKQASDPRPAIRKRSIEVLFNIMMD
HGHLFTRPFWAAIFSSIILPVFNNNMRSRTDMLFEESSNGDSPTSASLDPEEATWDAETS
TLALQLLVDLLANFFSSVRSQLPSVMSIILGFIKSPLQGSTGSGVSVLLRLAEGLSRSAS
EDEWTEVFLALKEAASLTFAGFMKVLRTMDDIEDVETFSDQSVNNDDLDDDNLHIMSYVV
SRTKKHIDVLSQIVEVVSELYRRNQYSLPASHVDILADIFSCIASHAQQLNTDTVLRRKF
KRACSVQNLTQLQLLIFENESNKSYLNFLQDMVTCNSDVSKELELESRLVNECSKVVKIY
LNCTGQHQQQTKPIHWILPMESDRTEEATARTSLLVSSLEALCSLEAESLKRHVSSVFPL
LVDLVKTEHCSPQVPYALSNVLKSCIGPILG
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtcacaaacactcggcggcgccacacgctgcggccgcgtgataggtccgtcc
ctcgacaagatcatcaaaaacgccgcgtggcgcaagcacacgtacctcgtctcctcctgc
aaatccgtcctcgacaggctcgagtccctccccgacgacacccacgatcccacctccgtc
gtctccggcctctcctccaccgacgctgactccgtcctccagcctttcctcttctccctc
gacaccgcctactccaaagtcgtcgagccggccctcgactgcgccttcaagctcttctcc
ctctccgtcatccgcggcgagatccagtcctccaaacaggactccgtcctcttcaagctc
gtcaacgccgtctccaaagtcggcgccatggccgaggagccgatccagctcgccgtcctc
cgcgtcctcctcgccgccgtcagatctccctccgtcttgatccgcggagattgcttgctc
cacgtcgtcaagacttgctacaacatctacctcggcgggttgagcgggacgacgcagatc
tgcgccaagtccgtgctggctcagatgatgctcgtgatcttcaccagatccgaggaggac
tcgcttgacgtgacggtcaagacggtgtacgttaacgagctgttgacgtacacggacaag
agcgtcaacgaaggcagctctgtttatttctgccaagggtttgtgaacgaggtcatggct
gcgggacaagggagtcctcttcctcctcctgatgtcattcagatccttctccagaacccg
gagaccgagaccgttatgactcctgactctccttcgtttcgaggctacgagaaaaacaat
aacggagataatgctgattctttaaccggtggtgacatgagcaagatgagacaggacgct
ttccttttgttcaagaacttgtgtaagttgtcgatgagattctcctcgcaggagaagaat
gatgatcagatcatggtgaggggtaagacattgtctcttgagttgcttaaggtcatcatc
gacaatggtggtcctgtttggcgctctaatgaaagcttcatcaatgcggttaagcaatac
ttatgcttatcactactaaagaacagtgcggtatcaatcatgtctatattccagttgcaa
tgtgccatcttcatgagccttttatcaaagcttagatcagtcctgaaatcggaaatcgga
atattctttccgatgattgtcctccgtgtgctagagaatgttctccagcctagtttccta
cagaagatgactgttctcaacttgctggagaaaatgtctcaagatccgcagttgattgtc
gatatctttgtaaactatgactgcgatgtagactcctctaacatactagaaaggattgtc
aacggtcttctgaaaactgctctaggaccacccaccggttcatcaacaactctgtctcca
gcacaagatagtacgtttaggaatgaatctgtgaaaattttggttaatctagtcaaggca
atgggaaactggatggatcagcagttgaaagtgaatgagacggtttggcctaaaggctcc
cagctatatgcttctatggatagtagtaatgcaagccagattggtgaagaagtaactata
tctgactctgattcacagccagatactaatcctgaagcttatgatgcttctatgcttgag
caacgaaaagcttacaagattgaactccagaagggtatatctttgtttaataggaagcct
tctaaaggtattgagtttctgataaacagcaagaaaataggaaactctccagaggaagtg
gcttcgtttctgatgaagacagcggggctgaatggaacagtgattggtgattatcttggt
gaaagagaagagcttccacttaaagttatgcatgcatatgtggactcgtttaatttccaa
gggaaggattttgttgaagctataaggttttttctacgcgggtttaggctaccaggtgaa
gcgcagaaaatcgacagaatcatggagaaatttgcagaacattactggaaatgcaaccct
gcttctttcacaagtgcagacactgcttacgttctggcttattctgtgattatgctcaac
acagatgcacacaacaacatggttaaggataagatgtcgaaagctgactttgtccgcaat
aaccggggaatagatgatggcaaggacctacctgaagagtatctaggctctctctatgac
cgagttgtaaaagacgagattaagatgaactcagatactttagccccacaaagtaaacag
gtgaacggcttgaataagctactgggcttagacggcatcctcaatctggtttcttggatg
caaccagatgagaaagcgcatggtgccaacaggatgcttataagagacatccaggaacag
ttccaagctaaatcagagaaatcagagtcagtgtatcatagtgttacagatgtctccatc
ttaaggttcatactcgaggtctcgtggggaccgatgcttgctgcattcagtgtcactctt
gaccagagtgatgatagactagcaacttctctgtgcttacaaggcttccgatatgcggtc
cacgtcactgcagttatgggaatgcaaactcagagagatgcttttgtcacttccatggcc
aagttcactaatcttcattgtgctgcagatatgaagcagaaaaatgttgatgctgtaaag
gcgataataacaatagccatagaagatggtaaccatctacaaggctcttgggaacatatt
ttaacttgcctttcacgtatcgaacatctgcaactcttgggagaaggatcattacctgca
gacgcacgtcacatccctacaacaaaagctgaagtagatgaaaagaaggctttaggtttt
ccacatttaaagaaacgtggcgctcttcagaacccatctgtgatggctgttgtcaggggt
ggttcttatgatagtacctcacttgtgaaaaccgttcccaaattagtaactccggagcag
atcaagaacttcattgctaatttgaatctgcttgatcaaataggcaactttgagttgaac
catgtctatgctaatagccagaggctgaacagtgaagctatagttgctttcgttaaagcg
ctttgtaaagtctccatgtccgagcttcagtcgccggaagatcctcgcgtctttagcctc
acgaaactagtggagacagcgcattataacatgaaccggatccggttagtttggtcccgc
atatggaatgttctctctgacttctttgtatcagttgggttatcagagagtctctcagtt
gcaatatttgtaatggactcgctccgtcagctttcaatgaagttcttggagcgtgaggag
ctagcaaactaccatttccagcatgagtttctcagaccattcgttgttgtcatgcagaag
agcagctcggctgagattagagagcttatagtcagatgtgtttctcaaatggttctcagt
agagttagtaatgtgcaatctggttggaaaagtgtcttcacggttttcacaactgctgcg
gttgatgagaggaagaacattgtaatgttggcttttgagacgatagagaagatcgtgagg
gatcattttcattgcataactgaaactgagatatcggtatacgctgactgcatcagatgc
ctcatcaccttcaccagcagcaagtttgaaggtgatattggtttcaacaccatagagttt
cttcgtttctgcgcttccaagcttgcggaaggaggactcttcttgaacgagaagctgaag
aacgataacatctcagcttttaaggaagattcatctgatggacagagtgttacgactgac
cttgatgaacaagtttcttattgggttcctctgctttcaggtttatcaaagcaagcctca
gatccaagaccagcgattcgaaagcgttcaatagaagtactcttcaacattatgatggat
catggtcatctctttacaagacccttttgggctgcaatcttcagctctatcattctccca
gtcttcaacaacaacatgcgtagtagaaccgatatgctcttcgaagaaagcagcaacggt
gattccccaacctcagcttctctagaccctgaagaagctacatgggacgctgagacatca
acactcgcattgcagcttcttgttgatctactcgccaactttttcagctcagtcaggtct
cagcttccaagcgtcatgtcaatcattctagggtttataaagagtcctcttcaaggctcc
acaggctcgggggtctctgtcttgcttcgtctggctgagggactgtctcgtagcgcatct
gaagatgaatggacagaggttttcttggctctcaaggaagcagcgtcgcttactttcgcg
ggtttcatgaaagtcttgcgaaccatggatgatattgaagatgttgaaacgttttctgat
caaagcgtaaacaatgatgatcttgatgatgataaccttcacatcatgtcctatgttgtc
tccagaacaaagaaacacattgatgtcttgtctcaaatcgtcgaggtcgtgagtgagtta
tacagaaggaaccaatactcattgccagcatcacacgtggatatcctcgcagacattttc
tcatgcatcgcgtctcacgctcagcagctaaacaccgacacagtccttcgaaggaaattc
aagagagcatgctctgtccaaaacctaacacagcttcaactacttatcttcgagaacgag
tctaacaaatcatacttgaacttcctacaagacatggttacttgcaactcagacgtctcc
aaagaactcgaactcgagtctcgtctagtcaatgaatgttcaaaagtcgtcaagatctac
cttaactgcactggtcaacaccaacaacagacgaaaccaatccattggattcttcctatg
gaatcagaccggacagaagaggccacggcgaggacttcgttgctcgtctcttctctcgaa
gccttgtgctcattggaagcagagtctcttaaaagacacgtctcgagcgtcttccctttg
ttggtagatcttgtgaagactgagcattgctctccacaagtgccgtacgccctaagcaat
gttttgaaatcgtgcattggtcctattttaggttaa
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integrated database retrieval system
