Raphanus sativus (radish): 130509774
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Entry
130509774 CDS
T06014
Name
(RefSeq) transcription factor SPEECHLESS-like isoform X1
KO
K20558
transcription factor SPEECHLESS
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
130509774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
130509774
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
130509774
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
Motif
Other DBs
NCBI-GeneID:
130509774
NCBI-ProteinID:
XP_056861948
UniProt:
A0A6J0MRJ5
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Position
3:complement(21336213..21338666)
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AA seq
345 aa
AA seq
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MPDFLEECEFVDTSLAEDDLFAILESLEGAGEISPTAASTPYKDGTTSSKELVTDPNCET
SSPKKKRKRLETEKEDEEEEENTQQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGD
QASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRLVPSPRPSPPVLSPRKPPLSPR
INHHHLLLPPISPRTPQPTSPYLAYPPQLPLIPQPPHRSYSSLAGGSSLGDPPPYSPASS
SSSPSVSSNRESSVINELVANSKSASADVEVKFSGANVLLKTASHKIPGQVLKIISALED
LSLEILQVNINTVDETMLNSFTIKIGIECQLSADELAQQIQQTFC
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgccggattttcttgaagagtgtgaatttgtcgacacttcactagccgaagatgatctg
tttgccatcttagagagtctcgaaggcgccggagagatatctccaacggctgcatctaca
ccttataaagatggaaccacaagttccaaagagttagtaactgatccaaactgcgaaact
tcatctcctaagaagaagaggaagagactagaaaccgagaaagaagatgaagaagaagaa
gagaatacgcaacaaaagatgtctcacgtaaccgtggaacgcaacaggagaaagcaaatg
aacgagcacttaaccgttttacgttctcttatgccttgtttctacgtcaaaaggggggac
caagcatcgattataggaggagttgtggaatacattagcgagctgcaacaagttcttcaa
tctttagaagccaagaaacaacgtaagacatatgcggaagtcctaagcccgagactagtc
ccgagtcctcgtccttcaccacctgtcctaagcccgcgaaaaccacctcttagcccgcgc
atcaaccaccaccatctccttctccctcctataagccctcgaacacctcagcctacaagc
ccatacctggcctatcctccgcaactaccactcatcccacagcctccccatcgttcttat
agctcattggccggtggtagcagcttaggggacccacctccatactctccagcttcatct
tcttcctctccttcagttagtagtaaccgtgagagtagtgtgataaatgagctcgtcgct
aactcaaagtcggcttcggctgacgtggaagtgaagttctcaggagctaatgtgctgctc
aaaacggcgtcgcataagatccctggacaggttttgaagataatctctgctcttgaggat
ttgtctctcgagattcttcaggttaatattaacaccgtcgatgaaaccatgcttaattct
ttcaccatcaagattggaattgagtgccaactaagtgctgatgaattggctcaacaaatt
cagcaaacattctgctag
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