Ramlibacter tataouinensis: Rta_00140
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Entry
Rta_00140 CDS
T01544
Name
(GenBank) transcriptional regulator, LysR family-like protein
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rta03000
]
Rta_00140
Transcription factors [BR:
rta03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Rta_00140
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AEG91074
UniProt:
F5Y2A0
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Position
complement(23248..24144)
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AA seq
298 aa
AA seq
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MRKPRMSTPFSYRHLYYFWVVAKEGGVTRAADRLGMAVQTVSAQVRELERALGHALFKPA
GRGLALTEAGRAALHQADQIFQLGETLPTLVREAASTPSLRLAVGISDGLPKMAVRHLLD
PIIHAPHLRLLCHDGEFDDLLGELALHRLDMVIADRPAPANPSIKLYSHALGASPIAWYA
EASLHAKAKKGFPQSLAEVPVLLPTVHTAVRDRLDHWFDRQGIRPRVVGEFEDSALLKTF
GASGMGVFPAAALVDDELRQRWRVRHVGDCAGVEEHFIAITSEKKVQHPLLRQLTQPR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
ttgcgaaagccgcgcatgagcaccccgttcagctatcgccacctgtactacttctgggtc
gtggccaaggaaggcggcgtcacccgcgccgccgaccggctgggcatggcggtgcagacc
gtcagcgcccaggtgcgcgagctggagcgagcgctaggccatgccctgttcaagccggcc
ggccgcggcctggcgctgaccgaggccggccgcgccgcgctgcaccaggccgaccagatc
ttccagctgggcgagaccctgcccaccctggtgcgcgaggcggccagcacccccagcctg
cggctggccgtgggcatctcggacggcctgcccaagatggcggtgcgccacctgctggac
cccatcattcacgcgccgcacctgcgcctgctgtgccacgacggcgagttcgacgacctg
ctgggcgagctggcgctgcaccgcctggacatggtgatcgccgaccggccggcgccggcc
aaccccagcatcaagctgtacagccatgccctgggcgcctcgcccatcgcctggtacgcc
gaggcctcgctgcacgccaaggcgaaaaaaggctttccgcagtcgctggccgaagtgccg
gtgctgctgcccaccgtccacacggccgtgcgcgaccgcctcgaccactggttcgaccgg
cagggcatccgcccgcgggtggtcggcgagttcgaggacagcgccttgctcaagaccttc
ggcgccagcggcatgggcgtgttcccggccgcggccctggtggacgacgagctgcgccag
cgctggcgggtgcgccatgtgggcgactgcgccggcgtggaggagcatttcatcgccatc
accagcgagaaaaaggtccagcaccccctgctgcggcagcttacgcagccgcgctga
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