Rathayibacter toxicus WAC3373: APU90_01065
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Entry
APU90_01065 CDS
T04269
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc00010
Glycolysis / Gluconeogenesis
rtc00020
Citrate cycle (TCA cycle)
rtc00620
Pyruvate metabolism
rtc00785
Lipoic acid metabolism
rtc01100
Metabolic pathways
rtc01110
Biosynthesis of secondary metabolites
rtc01120
Microbial metabolism in diverse environments
rtc01200
Carbon metabolism
rtc01210
2-Oxocarboxylic acid metabolism
Module
rtc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
APU90_01065
00020 Citrate cycle (TCA cycle)
APU90_01065
00620 Pyruvate metabolism
APU90_01065
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
APU90_01065
Enzymes [BR:
rtc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
APU90_01065
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Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_N
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
ALS56551
UniProt:
A0A0C5BEU7
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All DBs
Position
224979..227705
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AA seq
908 aa
AA seq
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MTVNDQDPYSAGHVDSDPEETLEWNQSLDALVHERGAARGRDVMLSLLKRSKELHLNVPM
VPTTDYINTIAPENEPDFPGDEDVERRYRAWIRWNAAILVHRAQRPGIGVGGHISTYASS
ASLYEVGFNHFFRGHEHQGGGDQIFIQGHASPGPYARAFLEGRLSEQQLDGFRQEKSHVG
GGLSSYPHPRLMPEFWQFPTVSMGLGPVNAIYQAQANKYLTNRGIKDASDQQVWAFLGDG
EMDEVESRGQLQIAANDGLDNLNFVINCNLQRLDGPVRGNGKIVQELESYFRGAGWNVIK
LIWGREWDELLARDTEGALLELMNTTPDGDFQTYKTEDGAYVRENFFGRNPLAKKLVEDY
TDEQIWNLRRGGHDYRKIYAAMKAAAEHQGQPTVILAHTIKGYGLGRSFEGRNATHQMKK
MTLDNLKTFRDTMRIPITDAQLENNPYLPPYYHPGQNDEAIEYLQERRRALGGYLPERRS
KYTQLTLPDDSTYAIGKKGSGTQEIATTMAFVRILKDILRSKDFGHRIVPIIPDEARTFG
MDAFFPNAKIYNPRGQHYTSVDRELLLAYKESPQGQILHVGINEAGALAAFTAIGTSYST
QGEPLIPVYVFYSMFGFQRTGDAIWAAGDMMTRGFMIGATAGRTTLTGEGLQHADGHSPI
LAATNPAVVSYDPAYGYEIAHIMQSGLDRMYGGSHPDPNVMYYLTVYNEPIVQPQEPDDV
DVDGIIRGLHRISWGQWEGQKAQLLASGVAVPWALEAQKLLADDWGVSADVWSVTSWNEL
RRDGIQAEQHNFLYPEDDEQVPYVTQKLADAKGPFVAVSDFSHQVPDQLRQFIPGDFATL
GADTFGFSDTRAAARRYFYIDGPSIVVRTLQLLAKRGEVDPSLARHAIEKYRLHDVSAGT
TGNTGGES
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtgactgttaacgatcaggacccgtattccgccggtcacgtagattcggatcccgaggaa
acgttggagtggaaccagtcgctcgatgcgcttgtccacgagcggggtgccgcgcgcgga
cgcgacgtcatgctgagcctcctcaagcgttccaaggagctgcacctgaatgttccgatg
gtacccaccacggattacatcaatacgatcgcgcccgagaacgagcccgatttcccggga
gacgaagacgtcgagcgccgttaccgggcgtggatccgctggaacgccgccatcctggtg
caccgtgcccagcgtcctggtatcggggtcggcggtcacatctcgacttacgcgtcgagt
gcttccctctacgaggtcggcttcaaccacttcttccgcgggcacgagcaccagggcgga
ggcgaccagattttcattcagggtcacgcctctcctggcccgtacgcccgggcctttctc
gagggtcgtctgagcgagcagcaactcgatggcttccgtcaagaaaagtcgcacgtcggc
ggcgggctttccagctacccccacccgagacttatgcctgaattctggcaattccccacg
gtgtccatggggctcggcccggttaacgccatctatcaggcacaggcaaacaaatatctc
accaatcgcggcattaaggatgcctccgaccagcaggtctgggcgttcctcggtgacgga
gaaatggacgaggtcgagtcacgcggtcagctacagatcgccgcaaacgacggcctggat
aacctgaactttgtgatcaactgcaatcttcaacgcctcgacggtccggttcgcggcaac
ggcaagattgtgcaagagctggagtcgtacttccgtggtgccggctggaatgttattaag
ctgatctggggccgtgaatgggacgagctgcttgcccgcgataccgagggcgcgctgctc
gagctgatgaacaccacgccagacggcgatttccagacctataagacagaagacggtgcc
tatgtccgtgagaatttcttcggccgtaacccgctcgcgaagaagctcgttgaggactac
accgacgaacaaatctggaacctgcgccgcggcggtcatgactaccgcaagatctatgcc
gcgatgaaggcagccgccgagcaccagggccaacccaccgtcatcctcgcgcacaccatc
aagggctacggtctcggccgcagctttgagggacgcaatgcaacccaccagatgaaaaag
atgacgctggacaatctcaaaacgttccgcgacaccatgcgcattccgattacggatgct
cagctggaaaacaacccttatcttccgccgtattaccacccgggacagaacgacgaagca
atcgaatacctgcaggagcgacgtcgcgcgctcggcggctacctccccgagcgtcgttcc
aagtacacacagctcacgctgccggatgattccacatatgcaattggcaaaaaggggtca
ggaacacaggaaatcgccaccacgatggcgttcgtccgtatcctaaaagacatcctgcgc
tcgaaagacttcggtcaccgcatcgtccccattattccggatgaggcgcgaacctttggc
atggacgcgttcttccctaacgcgaagatctacaacccccgtggacagcactacacctcg
gtcgatcgggaactactcctggcttataaagaaagccctcagggccaaattctgcacgta
ggaattaatgaagcgggggctctggcggcttttaccgccatcggcacctcctactcaacc
cagggcgaaccgctcataccggtctacgtcttctattcaatgttcgggttccagcgcaca
ggcgatgccatctgggcagcgggcgacatgatgacgcgtggcttcatgatcggcgctacc
gcaggccgcactacgctcacgggcgagggcctacaacacgccgacggccattcgcccatc
ctcgctgccaccaatccggccgtggtgagctacgaccctgcgtatggctatgaaattgcc
cacattatgcaatccggcctcgaccggatgtacggcggctcgcaccccgacccgaacgtg
atgtattacctcaccgtctacaacgagccgatcgttcagccccaggaaccagacgatgtc
gatgtcgacggcatcatccgcggcctccaccgcatctcgtggggacagtgggagggacag
aaggcacagctgctcgcctccggcgtggccgtaccgtgggcgctcgaagcacagaagcta
ctcgctgatgactggggagtctcggctgatgtctggtcggtaacgtcctggaacgagttg
cgccgcgacggcatccaagccgagcagcataacttcctctacccagaagatgacgagcag
gtgccctatgtcacacagaaactcgccgacgctaaggggccattcgtcgccgtctccgac
ttctcgcaccaggtacccgaccaactgaggcagttcatccccggcgacttcgcgacactg
ggcgcagacactttcggattctcggacacgcgtgcagccgcgcggcgctacttctacatc
gacggtccctcgatcgtcgtgcgcacgctccagttgcttgctaagcgtggcgaggttgac
ccctcgctggcccgtcacgccatcgagaagtaccgcctgcacgatgtgagtgcaggcacc
accggcaacactggtggtgaaagctga
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