Rissa tridactyla (black-legged kittiwake): 128903643
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Entry
128903643 CDS
T09443
Symbol
EXOSC5
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128903643 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128903643 (EXOSC5)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128903643 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128903643
NCBI-ProteinID:
XP_054043629
LinkDB
All DBs
Position
Unknown
AA seq
217 aa
AA seq
DB search
DGGGAAGAACGPFSCEQGLLSRPDGSAAFLQGDTSVLAGLYGPAEVKGSKELPDRAALEV
LLRPKVGAPGVLERSREQQLRGSCEGCCWGCCTPRTAVTLVLQVLSDAGSLLSCCLNAAC
LGLLDAGLPLSSLFCGVTCALRPDGAIVLDPTTRQEQEARAVLTFAIASVERKVLMATTK
GSCSVEEMQQCLAAAQRAADTIFQFYRDSVRRKYSKS
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gatggcggcggggcggcgggtgctgcttgcggccccttctcctgcgagcaggggctgctg
tcgcgacccgacggctcggccgccttcctgcagggcgacacctcggtgctggccgggctc
tacgggccggcggaggtgaagggcagtaaggagctgcccgaccgggcggcgctggaggtg
ctgctgcgccccaaggtgggggccccaggggtgctggagcgcagccgggagcagcagctg
cgggggagctgcgaggggtgctgctgggggtgctgcaccccccgcaccgccgtcaccctg
gtgctgcaggtgctgagcgacgccggctccctgctctcctgctgcctgaacgccgcctgc
ctggggctgctggacgcggggctgcccctctcctccctcttctgcggcgtcacctgcgcc
ctgcgccccgacggcgccatcgtcctcgaccccaccacccgccaggagcaggaggcccgc
gccgtcctcaccttcgccatcgccagcgtcgagaggaaggtgctgatggccaccaccaag
ggcagctgctccgtggaggagatgcagcagtgcctggcggcggcccagcgcgccgccgac
accattttccagttctaccgcgattccgtccggcggaaatactccaaatcctga
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