Rissa tridactyla (black-legged kittiwake): 128904945
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Entry
128904945 CDS
T09443
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128904945 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128904945 (CNOT10)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128904945 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_12
TPR_8
ARM_TT21
DUF6058
TPR_MalT
TPR_7
TPR_17
SCAF11-like_C
BLOC1_2
RdRP_head
EMP24_GP25L
Motif
Other DBs
NCBI-GeneID:
128904945
NCBI-ProteinID:
XP_054046001
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All DBs
Position
2:complement(122523036..122556784)
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AA seq
744 aa
AA seq
DB search
MAADKAADQGTEKHEGAGTSGITDQEKELSSSALQAFLAGNYDACLQHLNTLQDINKDDY
KITLNTAVAEFCKSNQTTTDNLRQTLNQLKNQVHSVVEEMDGLDDVENSMLYYNQAVILY
HLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLAVLEKMISQ
GNNNSKNGKNESGNNTNKDSSNQKAESGALIEVAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSSDPGRKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQEPK
QENGSKTSSQLGGNTENSESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYD
KARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSDTRK
KPVFQPVHSIQPIQMPAFTTVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaaggctgcggatcaaggtactgagaaacatgaaggagcaggtacttct
gggattactgatcaggaaaaggaattgtcaagcagtgcattacaagcttttctggctgga
aactatgatgcttgtttacaacacctaaatacccttcaagacataaacaaagatgactac
aaaataactttgaatactgctgttgcagagttctgcaaaagtaaccagacaacaacagac
aacttgagacaaacccttaaccagctgaagaaccaggttcactctgttgttgaagaaatg
gatggtttagatgatgttgaaaatagtatgctgtactacaatcaggctgttattttgtat
catctgcgccagtatactgaagctatatcagttggggaaaagctgtaccagtttatagag
ccttttgaagagaagtttgcccaggctgtgtgcttcttgcttgtagacttatacctgcta
acttaccaagctgagaaagccttgcatctgcttgctgttctggaaaaaatgatttcacag
ggcaacaataacagcaagaatggaaaaaacgagtcaggtaataatacaaataaagattcc
tcgaatcaaaaagctgaaagtggagctttaatagaagttgctaaatctaagatacatcag
tataaggtgagagcctatatccagatgaagtcactaaaagcatgcaaaagagagatcaag
tctgttatgaatacagctgggaattcagctccttctctctttcttaagagcaattttgaa
tatttgaggggcaattatcgtaaagcggtcaaacttttaaacagtgcaaacattgctgaa
catccaggcttcatgaaaacaggtgaatgcttaaggtgtatgttctggaacaatcttggc
tgcatccactttgcaatgggaaagcacaatttaggaattttttactttaaaaaggccttg
caagaaaacgataatgcgtgtgcacagctaggaacgggcagctcagatccaggtagaaaa
ttttcagggagacccatgtgtacgctactgactaacaaacggtatgagttgctctacaat
tgtggaattcagctcttgcatattgggaggcccttagctgcctttgaatgcctgattgag
gcagtccaggtttaccattcaaaccctcgtctttggctgagaatagcagaatgctgcatt
gctgccaataaagggacgtcagaacaagagactaaaggtcttcccagcaaaaagggaatt
gtgcaatctatagtaggtcaaggctaccaccgtaagatagtcctagcatcccagtcaata
cagaatgtcgtttataacgatgggcagtcctcagcaatacctgtagccagtatggaattt
gcagcaatttgtctaagaaatgccttgctgctgctgccagaagatcagcaggagccaaag
caggaaaatggatctaaaactagtagtcagctggggggaaatacagaaaacagtgaaagc
agtgaagcatgcagcaataaaagtcatgaaggggataagttcattgcagctccaccttct
tctcctttgaagaaacaagaattagaaaatttaaggtgctcaatacttgcgtgtagtgct
tacgtggctctggctttgggtgataaccttatggcattgaatcacgcagataaacttctt
cagcaaccaaagctgtcagggtctcttaagtttcttgggcatttgtatgcggcagaagct
ctcatctctctagacagaatatctgatgccatcactcacttgaaccccgagaacgtcact
gatgtttccctcgggatctcttcaaatgagcaggatcaagggtctgacaaaggagagaat
gaggcgatggaatcttctggcaagcagaccccgcagtgctaccccagttcggtcacatct
gcgcgaacaatgatgttgtttaaccttggaagcgcttactgcttgaggagtgaatatgac
aaagctcgaaagtgtcttcatcaggctgcttcgctgatccaccccaaagagatccctcca
gaggctattctgctggctgtatatcttgaattacagaatggtaacacgcagctggcactg
cagatcatcaagagaaaccagcttctcccttcagtgaaaacactctccgacacgcggaag
aagcccgttttccaaccagtccactcaatccagcccattcagatgccagctttcaccacc
gttcaaaggaagtga
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