Rissa tridactyla (black-legged kittiwake): 128908800
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Entry
128908800 CDS
T09443
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
128908800 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtd04040
]
128908800 (CNGB1)
Ion channels [BR:
rtd04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
128908800 (CNGB1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Radial_spoke
Motif
Other DBs
NCBI-GeneID:
128908800
NCBI-ProteinID:
XP_054055621
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All DBs
Position
4:71576563..71606170
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AA seq
1194 aa
AA seq
DB search
MLGWIERVVPQPPVPHLTEEIPPAPVRDLEPAKAPTGKAGGPGDAAAHARTEETEKKVGF
AVPEDQGSVFESMGSSVLSWLSQGLEKVIPQPVPAPGTLQALGKSFEMSIDVPDQTEVQI
LKDEEVDALEITPFDPEEDELDGGGSETGSCGPEAGSDTMLEEWAGARVLSWLVQGFERI
VPQPEMPKKPELELREQKGKAVAGGTKGTKTQAKSKSSVSAAQSLPGAVEPVVAEEQPET
VATLIPPSLAGDSSRMFAWFVQGLEKVMPQPVTREKQDTQGVAAATSSPVEEIHIVPGEP
EETDLVLEEINDDWINEATCEMVAWGREAKLVADAHPLPPIQEEPQEEENRLWSCSLSAA
KEEEEEEEEEEKEEEEQEEEKEEGPLLLSPCLTADEGVDEVYFTEEALRFEQLEEAEISD
LESAFVQVEEETAEAAETDAEGNYPAVDIKDVDSGGDAVENDGTHLPVPTAGAPNMLAVP
GAAPASPRRRLLAPEDGLDEGLVSQSPTRALLGWDEEQRESLPERISSATSLSSAIINTR
LQELVKLFKERTEKVKEKLTDPDATSDDESPTTSPAKPAPAAAPVPPPAGEPEGDKPAED
EHYCEMLCCTFKYRPWLDHLKNYRFPSSIDPLTNLMYVLWLFFVVMAWNWNCWLIPVRWA
FPYQTPANIHCWLVVDYLCDLIYLLDILVFQTRLQFVRGGDIITDKKAMTENYLRSQRFK
MDVVCLLPLDFFYFKVGVNPLLRFPRCLKYMAFFEFNNRLEAILSKAYIYRVIRTTAYLL
YSLHVNSCLYYWASAYEGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTLFEIV
FQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYKIPKTVQNRVKT
WYEYTWHSQGMLDELELLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDMLKRLR
SVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDSKTVLVTLKAGSVFGEISLLAAGGG
NRRTANVVAHGFANLFILDKKDLNEILVHYPESQKLLRKKAKKMLKTSNKPKDEKGAPRD
PLIIPPKADTPKLFQAALAATGRMGGKGPLAQLRWRLKELKAMQDSSFSPIPPKSPVHRR
SPVTSHKAHTHLGEEIFSKSSDSLVTIRVIPTAQEDEEILAAEISEKEEEKEEK
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctggatcgagcgggtggttccccagcccccggtgcctcatctgacggaggag
atccccccggccccagtgcgggacctggagccggctaaggcaccgacaggaaaggctggt
ggccctggggatgctgctgcccacgcacgcaccgaggaaacggaaaagaaagtgggattt
gcggtccccgaggaccaaggctctgtgtttgagagcatggggagcagtgtactctcctgg
ctctcccaggggctggagaaggtgattccccagccggttccggccccaggaacgctgcag
gcgctcgggaagagctttgagatgagcatcgacgttcccgatcagacggaggtccagatc
ctcaaggacgaggaagtggatgctttggagataaccccctttgatcccgaggaggacgag
ctggatggcggcgggtcggagactggcagctgcgggccggaggctggctcagataccatg
ttggaggagtgggcaggagcgcgggtgctcagctggctggtgcagggcttcgagaggatt
gtgccacagccggagatgccgaaaaagccagagctggagctgagggagcagaagggcaaa
gctgtggcaggaggcacaaaagggactaaaacccaggcaaagtcaaaaagcagcgtttcg
gctgcccagagcctcccaggagcagtggagccagtagtggctgaggagcagccggagacg
gtggccaccctcatccctccgtcgctggctggggacagcagcaggatgtttgcctggttc
gttcagggcttggagaaggtgatgccgcagccagtgaccagggagaagcaggacacacag
ggagtggctgcagcaacctcgagtcccgtggaagaaattcatattgtccctggggaaccc
gaggagaccgaccttgtcctggaagagatcaatgatgactggattaatgaagccacgtgc
gagatggtggcctggggtcgtgaggccaagctggtggcagatgctcatccccttcccccc
atacaggaggagcctcaggaagaagaaaacaggctgtggtcgtgctccctgagcgctgcc
aaggaggaggaggaggaggaggaggaggaggaaaaggaggaggaagagcaggaggaggaa
aaggaggagggacccctgctcctgtcgccttgtctcaccgctgacgagggtgtggatgaa
gtctacttcacagaggaggccctcaggttcgagcagctggaagaagctgagataagtgat
cttgagagtgcttttgtacaggtggaagaggagacagctgaagctgctgaaactgatgct
gaaggtaattaccccgccgtggacatcaaggacgtggacagcggaggcgatgctgtggag
aacgacggtacccacttaccggtgcccaccgctggcgctcccaacatgctggcggtgccc
ggcgcagctccggcatcccccaggaggaggctgctggccccggaggatggtctggacgag
ggactggtgagccagtccccaacccgagcgctgctgggctgggacgaggagcagagggaa
agcctgcccgagcgcatcagttcagccacgagcctgagcagtgccatcatcaacacccgg
ctccaggagctggtgaagctctttaaagagaggaccgagaaggtgaaggagaagctgact
gaccctgatgccacctcggacgacgagagccctacgacgtcccctgccaagccggcgcct
gcggcagcaccagtgccccccccggcaggggagccggagggggacaagccggcggaggat
gagcactactgcgagatgctgtgctgcacgttcaagtaccggccctggctggaccatctg
aaaaactaccggttccccagcagcatcgacccgctcaccaacttgatgtacgtgctgtgg
ctgttcttcgttgtcatggcctggaactggaactgctggttgatccctgtccgctgggct
ttcccctaccagacgccggcaaacatccactgctggctggttgtggactacctctgtgac
ctcatctatctgctggacatcctcgtctttcagacccggctgcagtttgtccggggggga
gacataataactgataaaaaggccatgacagagaactacctgagatcacagcgctttaag
atggacgtggtgtgcctcctgcccctggatttcttctacttcaaagttggcgtcaacccg
cttctgcgctttcctcgctgtctgaagtacatggccttcttcgagttcaacaaccgcctg
gaggctatcctgagcaaggcgtacatctacagagtgattcggaccaccgcctatttactg
tacagcttgcatgtgaactcctgcctctactactgggcatcagcctatgaaggactgggc
tctaccacctgggtctacgatggtgaaggaaacagctacatccgctgctactactgggca
gtcaaaaccctcatcaccatcgggggcctgccggaccccaagacgctgttcgagatcgtc
ttccagctgctgaattacttcacgggcgtcttcgctttctccgtcatgatagggcagatg
agagatgtggtcggcgccgccaccgcagggcaaacttactatcggagctgcatggacagc
accattaaatacatgaacttctacaaaatccccaaaactgttcagaaccgggtgaaaacg
tggtacgagtacacgtggcattcacaaggcatgctcgatgagttggagctgctggtgcag
ctgccagacaagatgaggctggatatcgccatcgacgtcaactacaacatcgtgagcaaa
gtggccctcttccagggctgcgacaggcagatgattttcgacatgttgaagcggctcaga
tcggtggtctacctgcctaatgactacgtgtgtaagaagggagaaattggccgcgagatg
tacattatccaggcgggacaagtgcaggtgctggggggacccgatagcaaaaccgtgctg
gtgactctgaaagccggatctgtgtttggagaaataagcttgctggcggcgggaggggga
aatcgccgaacagcaaatgtggtggctcacggcttcgccaacctcttcattttggataag
aaggacttgaacgagattttggtgcattatccggagtcccagaagctgctgcgtaagaag
gccaagaaaatgctgaaaaccagcaataaacccaaggatgagaaaggagcccccagagac
ccactgatcatccccccgaaagctgacaccccaaaactcttccaggctgccctggctgcc
acagggaggatggggggcaaggggccgctggcccagctccggtggaggctgaaggagctg
aaggcgatgcaggattccagcttcagtccgatcccaccgaaatcaccagtgcaccggaga
tcgcctgtcacctcccacaaagcacatacccacctgggagaagaaatattctcaaaatct
tctgatagtttagtcaccattcgtgtgattcccacggcacaggaggatgaagaaattctt
gctgctgagatttcggagaaagaagaagaaaaagaagagaaataa
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