Rissa tridactyla (black-legged kittiwake): 128909658
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Entry
128909658 CDS
T09443
Symbol
CACNA1C
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04010
MAPK signaling pathway
rtd04020
Calcium signaling pathway
rtd04260
Cardiac muscle contraction
rtd04261
Adrenergic signaling in cardiomyocytes
rtd04270
Vascular smooth muscle contraction
rtd04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128909658 (CACNA1C)
04020 Calcium signaling pathway
128909658 (CACNA1C)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
128909658 (CACNA1C)
09153 Circulatory system
04260 Cardiac muscle contraction
128909658 (CACNA1C)
04261 Adrenergic signaling in cardiomyocytes
128909658 (CACNA1C)
04270 Vascular smooth muscle contraction
128909658 (CACNA1C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtd04040
]
128909658 (CACNA1C)
Ion channels [BR:
rtd04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128909658 (CACNA1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
DUF4834
Motif
Other DBs
NCBI-GeneID:
128909658
NCBI-ProteinID:
XP_054057598
LinkDB
All DBs
Position
1:complement(151176702..151666574)
Genome browser
AA seq
2205 aa
AA seq
DB search
MFQAFVRQAYHPLHSHQPGEPDTKYKGKLVHETQLNCFYIKPGGSNYGSPRPAHANMNAN
AAAGLAPEHIPTPGAALSWQAAIDAARQAKLMGSAGNATISTASSTQRKRQQYGKQKKQG
TTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSN
ATNSNLERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILE
QATKADGGNSIGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIAL
LVLFVIIIYAIIGLELFMGKMHKTCYHVQGGLIDTPAEDDPSPCAPQSAHGRQCQNGTEC
KAGWEGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWVNDAIGRDWPWIYFVTLIIIG
SFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENE
DEGMDEEKPRNMSMPTSETESVNTDNVPGADIEGENCGARLAHRISKSKFSRYWRRWNRF
CRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHYNQPDWLTEVQDTANKVLLALFTAEML
LKMYSLGLQAYFVSLFNRFDCFIVCGGILETILVETKIMSPLGISVLRCVRLLRIFKITR
YWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRSTFDNF
PQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIA
VDNLADAESLTSAQKEEEEEKERKKLARTASPEKKQEIEKTAVEEETKEEKIELKSITAD
GESPPATKINVDDYQPNENEEKSPYPTTEAPAEEDEEEPEMPVGPRPRPMSELHLKEKAV
PMPDASAFFIFSPNNRFRVHCHRIVNDNIFTNLILFFILLSSISLAAEDPVRHLSFRNQI
LFYFDIVFTVIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAIN
VVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFK
GKLYSCTDSSKQTAAECRGYYITYKDGEVNQPMIQPRSWENSKFDFDNVLTAMMALFTVS
TFEGWPELLYRSIDSHMEDVGPIYNHRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQ
GEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNQYQYKVWYVVNSTYFEYLMFVLILLN
TICLAMQHYGQSCMFKEAMNILNMLFTGLFTVEMVLKLIAFKPKGYFSDPWNVFDFLIVI
GSIIDVILSETNHYFCDAWNTFDALIVVGSIVDIAITEVNPAEHTQCSSSMNAEENSRIS
ITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGK
IALNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPDKKCDPESEPANSTEAD
HSCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEY
DPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFA
LVRTALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLI
QEYFRKFKKRKEQGLVGKPSQRNALSLQFAVLQAGLRTLHDIGPEIRRAISGDLTAEEEL
DKAMKEAVSAASEDDIFRRAGGLFGNHVSYYQSDGRSAFPQTFTTQRPLHINKSGNNQGD
TESPSHEKLVDSTFTPSSYSSSGSNANINNANNTALCRFPSPPTYPSTVSTVEGHGTPLS
PTIRVQEAPWKLPSKRTHYYETLGRSSSRDSQLAIVCQEEVSQDETYDENLNEDIEYCSE
PSLLSTEMLAYQDDENRQLTPPENNKGEDTRHSPKKGFLCSSALGRRASFHLECLKRQKN
QGVDVSQKTVLPLHLVHHQALAVAGLSPLLQRSHSPTMFSRLCATPPATPCSRGWPQQTI
PTLRLDGAESSEKLNSSFPSVHCGSRYTDNTGCSSPRRARPVSLTVPSQTAGSSRQFHGS
AGSLVEAVLISEGLMQFAQDPKFIEVTTQELADACDMTIEEMENAADNILNGNSKQSPNG
NLLPFVNCRDPGQDSAGEEEEEVQNPDCRKSQEELKDSRIYISSL
NT seq
6618 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagcctttgttcggcaagcgtatcacccgctacatagccaccagccaggggaa
cccgatacgaagtataaggggaagctggtgcatgaaactcagcttaactgcttctacatc
aaacctggaggttccaactatgggagtccccgtccagctcatgccaacatgaatgccaat
gcagctgcagggcttgccccagagcatatccctactccgggggcagctctgtcctggcaa
gctgcgattgatgctgccaggcaagccaaactgatgggtagtgctggcaatgcaacaata
tccacagctagctccacgcagagaaaacggcagcagtatgggaaacagaaaaaacagggt
accaccacagctacacgtcctccccgggcactgctgtgtttaacactgaaaaatcccatc
cggagggcatgcatcagcatcgtcgaatggaaaccatttgaaataattattttactgact
atttttgccaattgtgtggccttagctatctatatcccctttccagaagatgattccaat
gccaccaattccaatctggaacgagtggaatatctctttctcattatttttacagtggaa
gcatttttaaaagtaatagcatatggacttctctttcaccccaacgcttacctccgcaat
ggctggaatttactagattttataattgtggtagtagggctttttagtgcaattttagaa
caagcaaccaaagcagatggggggaattcaataggaggaaaaggtgccggatttgatgtt
aaagcactgcgggctttccgagtattacggccgttacggctggtgtctggagttcctagt
ctccaggtggttttaaattcaattatcaaggccatggtccctttgttgcatattgccctg
ctggtgctgtttgtcattattatctatgccatcattggactggagttattcatggggaag
atgcataagacctgctaccatgtgcaagggggactgatagatacacctgcagaagatgat
ccgtctccctgtgccccccagtctgcgcatgggcggcagtgtcagaatggcaccgagtgc
aaggcaggctgggagggacctaagcacggcattacgaactttgacaattttgcttttgcc
atgctgacggtgtttcagtgcatcacgatggagggctggacagatgtactgtactgggtc
aatgatgccataggaagggactggccctggatctattttgttacactaatcatcataggg
tcattttttgtacttaacttggttctcggtgtacttagcggggagttttccaaagaaaga
gagaaggctaaggctcggggtgatttccagaagttacgggaaaaacaacagctagaagag
gatttgaagggatacttagactggataactcaagcagaagatattgacccagaaaatgaa
gatgaaggcatggatgaggagaagcctcgaaacatgagcatgcccaccagtgagaccgag
tccgtgaacacagacaacgtccctggagcagatattgaaggcgaaaactgcggtgctagg
ctagcgcatcggatctcaaaatcaaagtttagtcgctactggcgccgatggaatcgattc
tgcagaagaaagtgccgcgccgctgtcaaatccaatgttttctactggttggtgatcttc
cttgtgtttctgaacacccttaccattgcctctgaacactacaaccagccagactggctc
acggaggtccaagacactgccaataaggtgctgctagctcttttcacggcagagatgctg
ctgaagatgtacagccttggtctccaggcctattttgtctccctcttcaaccgctttgac
tgtttcattgtgtgtggaggaatcctggaaacgattctggttgagacaaagatcatgtca
ccactgggcatttcggtgttgagatgtgttcgactcctaagaatatttaaaatcacaaga
tactggaactccctgagtaaccttgtggcttcactcctgaattcagtccgctccattgcc
tccctgttgctgcttctctttctcttcattatcatcttctcactcctggggatgcagctc
tttgggggcaagtttaactttgatgagatgcagaccaggaggagtacatttgacaacttc
ccccagtccctcctcactgtgtttcagatcctgactggggaggactggaattcggtgatg
tatgatgggatcatggcttatggcggcccctcttttccaggaatgttggtctgtatttac
ttcatcatcctcttcatctgtggaaactatatcctgctgaatgtatttttggccattgct
gtggacaaccttgctgatgctgagagtttaacatctgcacagaaagaggaggaagaggag
aaagaaagaaaaaagctagctaggactgctagtcctgaaaagaaacaggagatagaaaaa
acagctgtggaggaggagacaaaggaggagaaaatcgagctgaaatcgatcactgctgat
ggagaatccccacctgctaccaagatcaacgtggatgattatcagcccaatgaaaatgaa
gaaaagagcccatatcccacaacagaagcaccagcagaggaagatgaggaagaacctgag
atgcctgttggccctcggcctcgcccgatgtctgagctgcacctcaaggaaaaggctgtg
cccatgcctgatgccagtgcatttttcatcttcagtcctaacaacaggtttcgtgtccac
tgccatcgaatcgttaacgataacattttcaccaacctgatcctatttttcatcttgctc
agcagcatctccctggcagctgaggaccccgtccgacatctctcctttaggaaccaaatt
ctcttttattttgatatagtttttactgtcattttcaccattgaaattgctctgaagatg
accgcgtacggggctttcctccataagggttccttctgcagaaactatttcaacatctta
gacctgctggtggtcagcgtttcgctcatctcctttgggatccagtccagtgccatcaat
gtggtgaagatcctgcgtgttctgcgagtccttagaccactgagggccatcaacagagcc
aaaggactaaagcatgtggtccagtgtgtgtttgtcgccatccgaaccatcggaaacatt
gtgattgtcactactttgctgcagttcatgtttgcctgcattggagttcagttgtttaag
ggcaagctgtacagctgcactgatagctccaagcagacagcagcagaatgcagaggttat
tacattacgtacaaggatggtgaggtcaaccagcccatgatacagccccggagctgggag
aacagcaagtttgacttcgacaacgtcttgactgccatgatggccctctttactgtctca
acatttgagggctggccagagttgctgtataggtccattgattcccacatggaggatgtg
ggacccatctataatcacagggttgagatctccatcttctttattatctacatcatcatc
attgctttcttcatgatgaacatcttcgttggtttcgtcatcgtcacatttcaggaacaa
ggagaacaagagtacaagaactgtgagctggacaaaaaccagcgtcagtgtgtagaatat
gccctgaaagcccggcccctgcggagatacatccctaaaaaccagtaccagtacaaagtt
tggtatgtggtcaactccacctattttgaatacctgatgttcgttctgatcctgctgaac
accatctgcctcgccatgcaacactacggtcagagctgcatgttcaaggaagccatgaat
atcctcaacatgctcttcactggcctcttcaccgtcgagatggtcctgaaattaatcgcc
ttcaagcccaagggttactttagtgatccttggaatgtttttgacttcctcatcgtaatt
ggcagcattatagacgtcattctcagtgaaactaatcactatttctgtgatgcatggaat
acatttgacgccttgattgttgtgggtagcattgttgatatagcaatcaccgaggtgaac
ccagctgaacatacccaatgctcttcctctatgaacgcagaggaaaactctcgcatctca
atcaccttcttccgactcttccgcgtgatgcgtctcgtgaagctcctgagccgaggggag
ggcattcggacgctgctttggaccttcatcaagtccttccaggctctcccctatgtggct
cttttaatagtgatgttgttcttcatctacgccgtgatcgggatgcaggtgtttggtaaa
attgcgctgaatgataccacagaaatcaaccgcaacaacaacttccagaccttcccccag
gcagtgctgctgcttttcaggtgtgccactggtgaggcctggcaggaaatcatgctggca
tgtctccctgacaagaagtgtgacccagagtcggagccggccaactccaccgaagccgat
cactcctgtggcagcagcttcgccgtcttctatttcatcagcttctacatgctctgtgcc
ttcctgatcatcaatctttttgtagctgttataatggataactttgattacctgacacgg
gactggtccattttaggaccacaccacctggatgagtttaaaaggatctgggcagagtat
gaccctgaagccaagggacggatcaaacacttggacgtggtgacactgctccggcggatt
cagcctcccctgggctttgggaagctctgccctcaccgggtggcttgcaaacgccttgtc
tccatgaacatgccactgaacagtgatgggactgtcatgttcaatgccactctctttgca
ttggtcagaacagcactaaggatcaagacagaaggtaacctggagcaagccaacgaagag
ctgagagcaataattaagaaaatctggaagcgcaccagtatgaagctgctggaccaggtg
gtgccccccgcaggtgatgacgaagtgactgtagggaagttctacgccactttcctgatt
caggagtatttccggaagttcaagaagcgtaaagaacagggactggtgggcaagccctcc
cagcgcaacgcactctccttgcagtttgctgttttgcaggctggtctgcgcacacttcac
gacattgggccagagatacgaagagcaatttctggagacctgacagctgaagaagagcta
gataaggccatgaaagaagctgtttctgctgcctctgaagatgatatcttccggagagct
ggaggcttgttcggaaaccatgtcagctattaccaaagtgacggcaggagcgcgttcccc
cagacattcaccacccagcgacctctgcacatcaataagtctggcaacaaccagggagat
acagagtctccatctcatgagaagctggtagactccaccttcactcccagcagctactca
tcttcaggctccaatgccaacatcaacaacgccaacaacactgccctgtgccgtttcccc
agcccacccacctaccccagcactgtcagcacagtggaaggccacgggacccccttgtca
cccaccatacgtgtgcaggaagctccttggaaactaccttccaaaaggacgcattactac
gaaacactgggacgctccagttccagagacagccagctggcaattgtttgccaagaggaa
gtgtctcaggatgagacttatgatgaaaatttgaatgaagacattgagtactgtagtgaa
ccaagtctgctctctactgaaatgcttgcataccaagatgatgaaaacagacaacttact
ccaccagaaaacaacaaaggagaggacacccggcactctccaaagaaagggtttctgtgc
tcctcagcactaggtcgaagagcatcttttcacttagagtgtctgaaaagacagaaaaac
cagggcgtagacgtctcgcagaagacagttctgcctttgcatctggtacaccatcaggcg
ttagcggtggccggcctgagtcccctgctccagcgaagccattcccccaccatgttctct
cggctgtgtgcaacgccccccgctacaccctgcagccgtggctggccgcaacagaccatc
ccgactctgcgcctggatggggcagagtccagcgagaagctcaacagcagcttcccctca
gtacactgcggctctcggtacactgacaacaccggctgcagcagcccgaggagagccagg
ccagtctccctcaccgtccccagccagaccgcagggagcagcaggcagtttcacggcagc
gctggcagcctggttgaagcggtcttgatttcggaaggactgatgcagtttgctcaagat
ccaaagttcattgaggtcacaacccaggagcttgcagacgcctgtgacatgacgatagaa
gagatggaaaatgcagcagacaacattctcaatggtaacagcaagcagagccccaatggc
aacctcttgccttttgttaactgcagggacccagggcaggacagtgcaggagaggaagag
gaagaggtgcagaacccggattgtagaaaaagtcaggaggagctcaaggacagcaggatt
tatatcagcagcctgtag
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integrated database retrieval system
