Rissa tridactyla (black-legged kittiwake): 128912500
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Entry
128912500 CDS
T09443
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtd04040
]
128912500
Ion channels [BR:
rtd04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128912500
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
128912500
NCBI-ProteinID:
XP_054064493
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All DBs
Position
7:20947603..21004821
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AA seq
2018 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRVNEEKAKKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISYFNSSI
GENGTFINTTMTIFNWDEYIEDRNHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDGEEFHKSESEDSIKRKGFRL
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTIPQLPANGKMHSTVDCNGVVSLVGG
PPALMSPTGQLLPEVMIDKAATASNGTTTETDLRKRRSSSYHVPMDYLTDPSARQRAMSI
ASMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITI
CIVLNTLFMAMEHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFD
GFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAV
ARIQKGIDYVKRKVREFIQKAFVRKQKVLDEIKPLEDLNNKKDSCISNHTIVEIGKNLAY
LKEGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESD
LEESKEKLNASSSSEGSTVDIGLPPEGEQPEAEPEESLEPEACFTEGCVRRFKCCQVSVE
DGKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADK
VFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCV
NTTTDERFDISQINNYSQCEELIKNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDI
MYAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVT
MMVETDDQSEDMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIV
GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSG
EPDCDPHKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESA
EPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMV
SGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEV
SAVIIQRAFRRHLLRQKVKKVSCIFNQDKGKDEDDLPMKEDMIMDKLNENSTPEKTDMTP
STTSPPSYDSVTKPDKDKYEKDKSEKEDKGKDSRESKK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagcttccgctatttcacaagagaa
tcacttgcagctattgagcagcgtgtcaatgaagaaaaagctaaaaagtccaaacaagaa
cgcaaagatgatgatgatgaagatggaccaaagccaaatagcgacttggaggcaggaaag
acactgccatttatttacggcgacatacctccaggaatggtgtccgagcccttggaagac
ctggacccatattatatcaataaaaaaacctttatagtattgaataaagggaaggcaata
ttccgattcagtgccacctctgccctctacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgactatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacttttgagtcacttattaaaattcttgcaaggggcttctgt
ttagaagattttacatttcttcgagacccatggaattggctagatttcactgtcattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcttgaagactatcgtgggagcc
ctaattcaatctgtgaagaagctctcggacgttatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattcgacttttgaaacaactgttatttcctactttaatagctctata
ggtgaaaatggtacatttattaatacaacaatgacaatatttaactgggatgagtacatc
gaagacagaaatcatttctacttcttggaaggacaaaatgatgctctgctgtgtggcaat
agctcagatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacactgcgtgctgctgggaaaaca
tacatgatattttttgttttggtcattttcctgggttctttctacttgattaacttgatc
ctggctgtggttgccatggcctatgaagaacagaatcaagcaaccatggaagaagcggaa
cagaaagaagcagaatttcagcaaatgctggaacaactgaaaaagcaacaggaagaagct
caggcggcagcagcagctgcagcagctgactccagagattatagtggagtaggtggaata
ggtgggttctccgaaagttcttctgaggcatcaaaactgagctcaaagagtgctaaagag
aggaggaatagaagaaagaaaaaaaagcaaaaagaacaatctgaaggcgaggagaaggat
ggggaagaatttcacaaatctgaatcagaggacagcatcaaaaggaaaggcttccgactt
tccattgaaggcaatagactgacatatgaaaagagattctcttccccacatcagtctttg
ctgagcattcgtggctccctgttttccccaaggcgcaatagcagaacaagtcttttcagc
ttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgctgatgatgagcacagc
acttttgaagacaatgagagcagaagagattctctctttgttcctcatagacatggtgaa
cggcgcaacagtaacattagccaggccagtaggtcatccaggacaatccctcaacttcca
gcaaatgggaagatgcacagcactgtggattgcaatggagtagtttctttggtcggtggg
ccgccagctctgatgtcacctactggacagcttctgccagaggtgatgattgataaagca
gccactgctagcaatggcactactacagaaactgacttaagaaagagacggtctagttct
tatcatgttcctatggactacctaacagatcctagtgcaaggcaaagagcaatgagtata
gccagcatgcttactaacacaatggaagaactggaagaatccagacagaaatgcccacca
tgctggtataaatttgctaacacttgcttgatttgggactgctgtactccctggctgaaa
gtcaaacatattgtaaatttgattgtgatggatccatttgttgatctagccattactatc
tgcattgtcctgaacactctgttcatggccatggagcactatccaatgacagaacagttt
agtggtgtactttcagtaggaaaccttgtgtttactggaattttcacagcagaaatgttt
ctcaagataattgccatggatccttattattatttccaagagggctggaatatttttgat
ggttttattgtgagtcttagtttaatggagcttggccttgcaaatgtagaaggattatct
gtccttcgatcattccgattgcttcgagttttcaaattggcaaaatcttggccaactcta
aatatgttgattaagattattggcaactcagtgggggctttggggaacctgaccctggtg
ctggccatcattgtcttcattttcgctgtggttgggatgcagctgtttgggaaaagctac
aaggaatgtgtctgcaagatctccagtgactgtgaacttccacgctggcacatgcatgat
tttttccactctttcttgattgtatttcgagtgctgtgtggagaatggatagaaacgatg
tgggactgcatggaggttgctggccaaactatgtgccttacagtcttcatgatggtcatg
gtgattggaaacctagtggtactcaacctctttttggccttgctgctgagctcatttagt
tcagacaaccttgctgctacagacgatgataatgagatgaacaatctacagattgctgtg
gcaaggattcagaaaggcatagattatgtgaagagaaaagtgcgtgaattcatccaaaaa
gcctttgttagaaagcagaaagttttagatgaaatcaaacctcttgaagacctaaacaac
aaaaaagacagctgtatttccaaccacacaatagtagaaataggtaaaaatcttgcctat
cttaaagaagggaatggaactaccagtggtataggcagcagtgtggaaaaatatgttgtt
gatgaaagtgattacatgtcattcataaacaacccaagtctcactgtgacagtgccaatt
gctgtcggggaatcagattttgaaaatttaaatacagaggagttcagcagcgagtcagac
ctggaagaaagcaaagagaaattaaacgcttccagttcatcagagggcagcacagttgat
atcggactacctccagaaggggaacagccagaagcagaacctgaagaatctctggagcca
gaagcttgttttacagaaggctgcgtgcggagattcaaatgctgtcaagtcagtgtagaa
gatgggaaggggaaaatctggtggaatcttaggaaaacctgctataagattgttgaacac
aactggtttgagaccttcattgtcttcatgattcttcttagcagcggtgctctggcattt
gaagatatatacatagagcaacgtaaaactatcaagaccatgctggaatatgctgacaaa
gtttttacttatatcttcattctggaaatgcttttaaaatgggtggcttatggctttcaa
acctatttcactaatgcgtggtgctggctggacttcctgattgttgatgtctctttggtt
agcttaacagctaatgccttgggctactcagaacttggtgcgattaaatcccttaggaca
ctaagagctttgagacctctaagagccttgtcgcgatttgaagggatgagggtggttgtg
aatgccctcttaggagcgattccatccattatgaatgtgctgcttgtttgccttatattc
tggctgatcttcagtatcatgggagtaaatctatttgctggaaaattttactactgtgtt
aacactacaactgatgagaggtttgatatcagccaaatcaacaactacagtcaatgtgag
gagctcataaaaaacaatgaaactgcccgatggaagaatgtgaaggttaactttgataat
gtaggccttggttatctttctctgcttcaagtggctacttttaaaggatggatggatatc
atgtacgcagctgttgattctcgtaatgttttggatcagcctaagtatgaagataacctg
tacatgtatctttactttgtcatctttatcatctttggatcattctttaccttgaacctt
ttcattggtgtcatcatagacaatttcaaccagcagaaaaagaagtttggaggtcaagac
atttttatgacagaagaacagaagaaatactacaatgcaatgaaaaaattgggttcaaag
aaaccacaaaagcctatacctcgaccagcaaacaaattccaaggcatggtctttgatttt
gtaacaaaacaagcatttgatatcagtatcatgatactcatctgccttaacatggtcaca
atgatggtagaaacagatgatcagagtgaagacatggaaaacattttatactggattaac
ctggtcttcattgtacttttcactggagaatgtgtcctgaaattgatttcacttcgccat
tactactttactataggctggaacatttttgattttgtggttgtcattctctccatagta
ggtatgttcttagctgagatgattgagaaatattttgtgtcccccacactattcagagtg
atccgacttgccagaatcggtcgaattctgcgtctcattaaaggcgctaagggaatccgc
actctgctttttgctttgatgatgtctcttcctgctttgttcaacattggtctgctgctg
ttcctggtcatgtttatctatgcgatatttggcatgtccaactttgcctatgttaagagg
gaagttggcatcgatgacatgttcaactttgaaacgtttggcaacagcatgatctgcctc
tttcaaattaccacatctgctggctgggatggtttgctcgccccaattctgaacagtggg
gagccagactgtgacccccataaagatcatccggggagctctgtgaaaggcgactgcggc
aacccttctgttgggatcttcttctttgtcagctacattatcatctcatttctggtagtg
gtgaacatgtacattgctgtgatcttggagaacttcagtgttgctactgaagaaagcgct
gaacccttgagcgaggatgactttgagatgttctatgaggtctgggagaagtttgatccc
gatgcaacacaattcatagagttcagtaagctatcagattttgcagcttcgttagatcct
cctcttcttatagcaaaaccaaacaaagtccagcttattgcaatggatctgcccatggta
agcggcgacagaattcactgccttgacatcttgtttgctttcacaaagcgtgttttgggg
gaaagtggggagatggatgccctcagaatacagatggaagatcggtttatggcagccaat
ccttctaaagtctcctatgaaccaattacaaccacattaaaacgaaaacaggaggaggta
tctgctgtcattattcagcgtgctttcagacgtcatcttttaaggcaaaaagtcaaaaaa
gtttcatgtatatttaaccaagataaaggtaaagatgaggatgatctgcccatgaaagaa
gatatgattatggataaactaaacgagaactctactccagaaaaaacagatatgacccca
tccacaacctccccaccttcttatgacagtgtaacaaagccagacaaggataaatatgaa
aaagacaaatcagaaaaagaagataaaggtaaagacagcagggaaagtaaaaagtaa
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