Rana temporaria (common frog): 120913203
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Entry
120913203 CDS
T07929
Name
(RefSeq) U8 snoRNA-decapping enzyme-like
KO
K16855
U8 snoRNA-decapping enzyme [EC:
3.6.1.62
3.6.1.64
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00230
Purine metabolism
rtem01100
Metabolic pathways
rtem01232
Nucleotide metabolism
rtem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
120913203
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120913203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120913203
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
120913203
3.6.1.64 inosine diphosphate phosphatase
120913203
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
120913203
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nudt16-like
NUDIX
Motif
Other DBs
NCBI-GeneID:
120913203
NCBI-ProteinID:
XP_040178920
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All DBs
Position
9:24752356..24759658
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AA seq
224 aa
AA seq
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MCVYIDRGGRSAMAQAAQPNKNPPEDRPRPRNVSREEALKLEGYRHACHVMLYAPTTAKL
FDRVPIRYIVLMMMRFDGRLGFPGGFVDLRDCSLEDGLNRELLEEMGPYFNTLKVTEQDY
KSSQVREIPQKAVTHFFAKELKVEEMESIEKEAVHAKDHGLEVMGIIRVPLYTLRDGFGG
LPAFLSNNFIGNSKSQLLYGLRSLRLLREDHIQDAIWSSQNIQF
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtatatcgacaggggggggaggagtgcaatggctcaggcggctcaacccaac
aaaaacccgccggaggaccggccccgtccgcggaacgtgtcccgggaggaggcgctgaag
ctggagggatacagacacgcctgccatgtcatgctgtacgcgccgaccaccgccaagctc
ttcgaccgtgtccccatcagatacattgtgctgatgatgatgaggtttgatggtcgcctt
ggttttccaggaggatttgtagatctgagagattgttctctggaagacggcctgaaccgg
gaactgctggaggaaatgggcccttattttaacaccctgaaggtgacggaacaggattat
aagagttctcaggtccgagagattccacagaaggccgtcacacatttctttgccaaagaa
ctaaaagtagaagagatggaatccattgaaaaagaggctgtccatgcgaaagaccacgga
ttagaggttatgggaataatccgagttcccctttatacgttacgtgatggttttggaggt
cttcctgcctttctttcaaacaacttcattggtaactccaaaagccaactcctatacggg
ctgcgatccctccgcctactacgcgaggaccacatccaagacgcaatatggtctagtcag
aatattcagttttga
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