Rana temporaria (common frog): 120917261
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Entry
120917261 CDS
T07929
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03030
DNA replication
rtem03410
Base excision repair
rtem03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120917261 (FEN1)
03410 Base excision repair
120917261 (FEN1)
03450 Non-homologous end-joining
120917261 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtem03032
]
120917261 (FEN1)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120917261 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120917261 (FEN1)
DNA replication proteins [BR:
rtem03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
120917261 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
120917261 (FEN1)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
120917261 (FEN1)
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120917261 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
DJC28_CD
HHH_5
Motif
Other DBs
NCBI-GeneID:
120917261
NCBI-ProteinID:
XP_040184361
LinkDB
All DBs
Position
11:complement(41356604..41360391)
Genome browser
AA seq
383 aa
AA seq
DB search
MGIQGLTKLIADVARGAIKENDIKSYFGRKVAVDASMCIYQFLIAVRQDGNLLQNEEGET
TSHLMGMFYRTIRMVENGIKPVYVFDGKPPEMKSGELAKRTERRAEAEKQLQAAQEAGEV
ENIEKFNKRLVKVTKQHNEECKKLLSLMGIPYVDAPCEAEATCAALVKAGKVYAAATEDM
DALTFGTPLLLRHLMASEAKKLPIQEFHLSRALEDIGITQEQFIDLCILLGCDYCETIRG
IGPKRAIELIRQHRSIEEVLDNIDLKKYPVPENWLYKEARQLFLEPDVVDINEIELKWQD
PDDEALVAFMCGEKQFNEDRIRNGAKKLTKNRHGSTQGRLDDFFKVTGSVSSTKRKEIDV
KGSAKKKAKTTGGTPSRKLKKGK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcaaggtcttactaaactgattgctgatgtggcccgtggagccataaaagaa
aatgacataaaaagttactttgggcgcaaagtggctgttgatgcctctatgtgcatctac
cagttccttattgctgtgcgtcaggatgggaatctgcttcagaatgaggaaggtgaaacc
accagccacctaatggggatgttctatcgtacaattcgcatggttgagaacggcatcaag
ccagtgtatgtgtttgatggaaagcctcctgagatgaagtcaggtgaactggccaaacgt
actgaaaggagggcagaggctgagaagcaacttcaagctgcccaagaggcaggagaggtg
gagaacattgaaaagttcaataagagacttgtaaaggtcacaaagcaacataatgaggaa
tgcaagaaactgctaagcctaatgggtattccatatgtggatgcaccatgtgaggcagaa
gctacctgtgctgctttggtgaaagctggaaaggtgtatgcagctgcgactgaagatatg
gatgcgttgacctttggtactccactgttgctccgtcatctcatggctagtgaggccaaa
aagttgcctattcaggaatttcacctcagtcgtgccttagaggatataggaatcacacaa
gagcagtttatagatctttgtatattgttaggctgtgattattgtgagaccatccgaggc
attggcccaaagagagcgatagaactgataagacagcacaggagcattgaagaggtccta
gataacatagacctgaagaagtaccctgttccagaaaactggttgtacaaagaagctcgt
cagctttttttagagcctgatgtggttgacataaatgaaatagagctgaagtggcaggac
ccagatgacgaagccctggtggcctttatgtgcggtgaaaagcagttcaacgaggaccgg
atccgtaatggtgccaagaagctgaccaagaatcgccatggtagtactcaaggccgacta
gatgacttcttcaaggtgactggttccgtcagctccaccaaaaggaaagagattgatgtt
aaaggctcagccaaaaagaaggcaaaaaccacgggcggcaccccatcaaggaaattaaag
aaaggcaaataa
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