KEGG   Rana temporaria (common frog): 120929163
Entry
120929163         CDS       T07929                                 
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem03030  DNA replication
rtem03410  Base excision repair
rtem03420  Nucleotide excision repair
rtem03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120929163 (RFC3)
   03410 Base excision repair
    120929163 (RFC3)
   03420 Nucleotide excision repair
    120929163 (RFC3)
   03430 Mismatch repair
    120929163 (RFC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rtem03032]
    120929163 (RFC3)
   03036 Chromosome and associated proteins [BR:rtem03036]
    120929163 (RFC3)
   03400 DNA repair and recombination proteins [BR:rtem03400]
    120929163 (RFC3)
DNA replication proteins [BR:rtem03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    120929163 (RFC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    120929163 (RFC3)
Chromosome and associated proteins [BR:rtem03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    120929163 (RFC3)
DNA repair and recombination proteins [BR:rtem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     120929163 (RFC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    120929163 (RFC3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_lid_RFC1 AAA AAA_22 Sigma54_activ_2 ABC_tran AAA_2 nSTAND6 MyTH4 AAA_16 DUF2247 CHB_HEX AAA_5
Other DBs
NCBI-GeneID: 120929163
NCBI-ProteinID: XP_040196351
LinkDB
Position
2:complement(77403481..77437241)
AA seq 356 aa
MSLWVDKYRPSLLAKLDYHKEQAAQLKNLVQCGDFPHLLVFGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVVQELLKNVAQSQQ
LETSTQRDFKVVLLTEVDKLSKDAQHALRRTMEKYMATCRLILCCNSTSKVIAPIRSRCL
AIRVPSPSIEEICTVLFSVCKKEGLSLPQELARRIAEKSGRNLRKALLICEACRVQQYPF
SSDQDLPETDWEIYVKETANAIVNQQTPQRLLEVRGRLYELLTHCIPPEVIMKSLLSELL
NNCDGQLKADVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMAIYKKFMEDGLEAMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtctgtgggtggacaaataccggcccagcctcctcgccaagctggactatcataag
gagcaggcggcccagctgaagaatctggtacaatgtggagactttcctcacctccttgtg
tttgggccatccggagccggaaagaagaccagaataatgtgcttgttaagagaactgtat
ggagctggtgtagaaaaacttaggatcgagcatcagacaataacgacgccttctaaaaag
aagattgagattagcaccatagcaagcaactaccatttagaagtgaatccaagtgatgct
ggaaacagtgatcgtgttgttgttcaagaattgctaaaaaatgtggcccagtcacagcaa
cttgagacgagtacacagagagattttaaagttgtattgctaacagaagtggataaactt
tccaaagacgctcagcatgctttgagaagaaccatggagaaatacatggctacttgcaga
ctcattctttgttgtaattctacatctaaggtcattgctccaatacgtagtagatgtttg
gcaattcgtgtaccatctccaagcattgaggagatctgcacagttctgtttagcgtatgc
aagaaagaaggactgtctctaccacaggaactcgctcgaagaattgcagaaaaatctgga
agaaacctcagaaaggctcttctaatatgtgaagcttgtcgtgtccaacagtatcccttc
agttctgaccaagacttaccggaaacggattgggaaatttatgtgaaggagactgcaaac
gccattgttaatcaacagacgccacaaaggttacttgaagttcgcggtagactttatgag
cttctgacacattgtatccctcctgaagttataatgaagtcactgttatcggagcttctc
aataactgtgatgggcagttaaaagctgatgtggcgcagatggcggcttattatgaacat
cggctgcagctgggcagcaaagcaatttatcacctggaagcctttgtggcaaagtttatg
gccatttacaagaaattcatggaggatggactggaagcaatgatgttctag

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