Rana temporaria (common frog): 120931134
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Entry
120931134 CDS
T07929
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120931134 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120931134 (TTC37)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
120931134 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_17
TPR_2
TPR_1
TPR_16
TPR_14
TPR_11
TPR_8
TPR_12
TPR_19
TPR_CcmH_CycH
ANAPC3
TPR_9
TPR_7
TPR_15
BTAD
PPTA
Fis1_TPR_C
HAT_Syf1_M
COG4_N
HEAT_Nup120
Rhabdo_glycop_FD
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
120931134
NCBI-ProteinID:
XP_040198243
LinkDB
All DBs
Position
1:complement(124486253..124701408)
Genome browser
AA seq
1587 aa
AA seq
DB search
MSSKEVKAILKNARDAIRNKDYKEALKQCKAALKLDKNNYNAWVFIGLAAAELEQPDQAQ
AAYRKAAELEPEQLLAWQGLGNFYEKASQKEFKEDLPNVYQKLLELYRTSDKPKWYDICK
KLVDLYEQDRKYIEAAQTWQQLINMKQDEGIDKSEFYKLWRKMTKLLAEDIERQDNEIQQ
QLLNAFENAISFLEEVPGEEHRALYQDFVLCLSKLPHEEAKLKEICNNMTKAYPTLTYPL
EVLGLHLIKSGNISEEAVECYNRLMELDGDNGPGLIGIGITALHDKKYDLAVEKLCKGVH
KVSSCPHAWFFLAQAQEKLHRYEEAVLSCEKVIKALSHDNVSPRDSEHKNMALQLKAKAM
LEYCDPEEILKTLEQISNKNSDPALIALKGNVYLKKGFLEQASKLSEELIQSLPEMAEGH
FLKGLIHYTQKSYKEAEKSFQSAIERNLEDANYYYYLGLTYWFMSEETKRDKTKSVTQFL
KAAKLDPCHSKVFCYLGHYYKEVAGDKGRARGCYKKAFDLDKKDGESGAAAVDLSMDLAD
MDTALAILSAVTEKASAGTAKWAWLRRGLFYLRVGQHSKAVSDLHAALRADPKDSNCWEC
LGEAYLSRGGYTTALKSFMKASELNPNSIYSAYKIASIKQILGTFKEAATEYQQIVKKSG
EYVPALKGLGECHLMLAKGALADFLDAKAVAAIEQGLAYLTRAVQQRPDLVCLWKLIGDA
CTCLHAVSPAKVTINVLGALVGQNEGHQVISKSEALELGARCYGRALKIQSSANIWCDLG
INYFYQAQNLMSSDSQGSDSSNLLERSVQCIKKSLMMDSSNHQYWNSLGVVCCSKGVKNN
VLAQHAFIKSIQCQPNNAVAWTNLGALYLMNENIELSHQAFNVAQSLEPSYVRCWVGQAL
IAEAVGSYETMDLFRHTTELSMHTEGANGYAHWVCTTLQDKSNRNTELYRYSILQMNAIS
AAHLALNKYTDRIQTDASAFAMLGYLNEHLKLKIQAKEAYHRAVLILCDEEDKDRYACAL
RNYGRSLCAIGQYDEAIKAYTSTALTEFDDLTGLALAYFKKGLRQDSFKVYKTALSVAKS
EQEKAHILTAMAIIDHNQGNSDSAKTLLFKCSMLKEPSSESLQALCALGLAKRDVTLATA
ALNELLKHVKINDSVYERCLITSAIYALQGRMPAVQRQACKAVHSHPGNPELWTLLSRLV
PQYTPTNAKGGAVAGIVAQTLSQSQAKKSLLYTAVNELAAGTLACDNEKQNAVKSLQRAA
RFFPDNPAVWAGLMAACQAEYTVSCLNKAQAKCPEFNVKFLASVKSKTKAMTQLPTNYAK
SLETWSLCQAISSLKDQDKLSEAEALCTKVKGIKSYPEEPPFFLLLRQVRYKQLIQSHAP
SSESVLEELKKTLKFNANSQSSWHWLADMYQSQGMPMDAEMCYRRSLQLTSQQKNFSGKL
SSLLRLALLALRVCMAKIPDTRWADLLQEATSQALKMASCPLAILLQGLLQFCTKGSRSK
GQCDLLCGVRKFARITGFPLTTGLKVMLLQDISCPWAEARRPEINDKVLFMETSHGGFSS
HTHTYMVRIHVDTSIMSQTAAWSSEGT
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaaagaagtgaaagcaatattgaagaatgccagagatgcaattagaaataaa
gattataaagaagcacttaagcagtgcaaggcagcactaaagttggacaagaataactac
aatgcctgggttttcattggtttagctgctgctgagctagagcaaccagaccaagcacaa
gctgcctacaggaaagctgcggaacttgaaccagaacagttactggcctggcagggtttg
gggaatttttatgaaaaagccagccaaaaggaatttaaagaggatttgccaaatgtgtac
caaaagcttttggaactttacagaacctccgacaaaccgaagtggtatgacatttgtaaa
aaactagttgatctgtacgagcaagatagaaaatacatagaggctgcacaaacatggcaa
cagttaataaacatgaagcaagatgaaggaattgacaagagtgagttttataagttatgg
cgaaagatgaccaagctgctggcagaggacatagagcgccaagacaatgagatccagcag
cagctcttaaatgcctttgaaaatgccatttccttcctggaagaggtaccaggagaagag
caccgtgcactttatcaggactttgttctctgcttgtctaagctgccacatgaagaagca
aagttaaaagagatatgtaacaacatgacgaaggcctaccctaccctcacctatcctctg
gaagtacttggcttacacctcattaagtccggaaacattagcgaagaagctgttgagtgt
tacaacagacttatggagttggacggtgacaacggaccgggcctcattggaattggaatc
acagctctgcatgataaaaagtatgatctggcagtagagaaattatgtaaaggagtacat
aaagtgagttcatgcccccatgcgtggttctttctggcccaggctcaggagaaattgcac
agatatgaagaggctgttctgtcctgtgaaaaagttatcaaggctttgtctcatgataac
gtgtcacccagagattctgaacataaaaatatggctctgcagctgaaagccaaagcaatg
ctggagtactgtgatcctgaagagatcctgaaaactcttgagcagatttctaataagaac
agtgacccggctcttattgcactgaaaggcaatgtgtatttaaagaagggttttttggaa
caagcatccaagctgtcagaagagctcatacagtcactccctgagatggcagagggacat
tttctgaaaggtcttatccattacacgcagaagagttataaagaggctgaaaaaagtttt
cagagtgccattgagagaaacctggaggatgcaaactattattactatcttggactcact
tactggtttatgagtgaagaaaccaagagagacaaaacaaagtctgtcacacagttttta
aaggctgcaaaactggacccctgccattccaaagtattttgctacttaggtcattactac
aaagaagtagctggtgacaaagggcgagctcgaggatgctataagaaggcatttgaccta
gataagaaagatggagagtcgggagcagcggctgtggacctaagtatggatcttgctgat
atggacacagcattagctattttgtcggctgttacagaaaaggcaagcgcaggaactgca
aaatgggcttggcttaggcgaggtctcttctatctgagagtcggtcagcattctaaagcc
gtgtctgacttgcatgctgcacttagagctgatccgaaggattccaactgctgggagtgt
ttgggagaggcttacctgagcagaggcggatacaccactgcactaaaatccttcatgaaa
gccagtgaactaaacccaaactcaatatacagtgcgtacaagatagcctccatcaagcag
atcctggggacttttaaagaggctgcaacagaatatcagcaaattgttaagaagtctgga
gaatatgtgcctgcactaaaaggtcttggtgaatgccatttaatgcttgcaaaaggtgca
cttgcagatttcctggatgctaaggcagtggctgccatagaacaagggcttgcataccta
acaagggcggttcagcagcggccagatcttgtatgtttatggaaacttattggagatgcc
tgtacttgtcttcatgcagtctcaccagctaaggtcacaatcaatgtcctgggtgctctt
gttgggcagaatgaaggccatcaagtgattagtaaatcggaagctttagagcttggagca
aggtgttatgggcgagcattgaagattcaatcatctgcaaatatctggtgtgatcttggc
ataaattatttttaccaagctcaaaatctaatgagctctgacagccaaggaagtgactca
agtaatttattggaaagatctgtgcagtgtattaagaaatccctcatgatggacagtagc
aatcatcagtattggaattcacttggggttgtttgctgctccaaaggtgtcaaaaataat
gtacttgcgcaacatgcttttatcaagtcaatccagtgtcagcctaataatgctgttgca
tggactaatctgggggctctgtatttaatgaatgaaaatattgagctaagccatcaagct
ttcaacgttgcacagtctcttgaaccctcatatgtgagatgctgggtcggacaggccctg
attgctgaagcagttggaagctatgaaaccatggatctcttcagacacactactgagctc
agtatgcatacagagggtgccaatggatatgctcactgggtctgtacaactctgcaagat
aaaagcaatagaaacacagagctgtatcgctatagcatattacagatgaatgccatctct
gcagctcacctagccctaaacaaatatacagatcggattcagactgatgcttctgcattt
gctatgctgggatatttaaatgaacacctgaagctaaagattcaggcaaaagaagcatac
cacagggctgttttgatactttgtgatgaagaagacaaagaccgctatgcctgcgcactt
cgaaattatggacggtccctctgtgcgataggtcagtacgatgaagccatcaaggcatac
acatccacagctctgaccgagtttgatgatctcacaggactggctcttgcatactttaaa
aagggtcttcgacaggacagctttaaagtgtacaagactgctttgtctgttgcaaagtct
gagcaagagaaagcgcatatcctcaccgccatggcaattattgaccacaaccaaggcaac
agcgattctgccaaaaccctcctgtttaaatgctcaatgttgaaggaacccagcagcgaa
agtcttcaagctctctgtgctctagggttggcaaagcgggatgtaaccttggcaacagct
gcgcttaatgagttacttaagcatgttaaaattaatgatagcgtgtatgagaggtgcctt
attacgtctgccatatatgctctgcaagggaggatgcctgccgtgcagagacaggcctgc
aaagccgtccacagccatccaggcaatccagagctgtggactcttctgtcaaggctggtc
ccccaatacactccgactaatgccaagggtggtgcagtcgcaggcatcgtggcccagacc
ctaagccaaagtcaagcaaagaaatctctgctgtacactgccgtgaatgaattggcagcc
gggactctggcatgcgacaatgagaagcaaaatgctgtgaagtccttgcaaagagctgca
cgtttctttccagataatccagcagtttgggctggattaatggctgcctgtcaagcagag
tatacggtttcttgcctcaataaagcacaagccaaatgcccagaatttaatgtgaaattt
ttagcatctgtgaaatccaaaaccaaagcaatgacgcagcttccaactaattatgcaaag
tccttggagacctggtccttgtgccaagccatttcttcattgaaagatcaagataaactt
tcagaggctgaggctttgtgtactaaggtaaagggaataaaaagctatccggaggagcca
ccattttttttgcttttaagacaagttcggtacaagcagctcattcaatcccatgcaccc
tcctccgaatctgttctggaagaactaaagaaaacgttaaaattcaatgccaattcccag
tcttcatggcattggctggctgacatgtaccagtctcagggaatgccgatggatgctgag
atgtgctacaggaggagtcttcagttgacatcacagcaaaagaacttcagtgggaagctc
tcaagtcttctgcgattagcacttctcgcactgagagtttgtatggcaaagattcccgac
actcgctgggcggatcttctgcaagaggccactagtcaagccttgaagatggcatcatgc
ccgttggccattctactccagggacttctccagttctgcacaaaggggtcacgatccaaa
gggcagtgtgatttgttatgcggtgtgcggaaatttgcaaggatcactgggtttcccctc
accacaggcttaaaggtaatgttattacaggatatatcctgtccttgggctgaagctaga
agacctgaaattaatgacaaggtcctttttatggagacatcacatgggggcttctcgtca
cacacacacacatatatggttagaattcatgtagatacatcaatcatgtcacagaccgca
gcatggagctctgaagggacgtga
DBGET
integrated database retrieval system
