Rana temporaria (common frog): 120932265
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Entry
120932265 CDS
T07929
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120932265 (SH3TC2)
Membrane trafficking [BR:
rtem04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120932265 (SH3TC2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
SH3_1
SH3_2
TPR_4
SNAP
Motif
Other DBs
NCBI-GeneID:
120932265
NCBI-ProteinID:
XP_040200464
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All DBs
Position
3:241061561..241229823
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AA seq
1353 aa
AA seq
DB search
MDMEGQRNGSIFSRLSKNTKSDASSESWYNNCYTEERTTYSFWKALHRRTSTFVSTAGRG
SIDSTDSGFLTSWSLWQSCSTHRQQRCPDVETMASDDPEESELGSVAVGTPLGKDCISLG
VGEGFITEISLSFSILRRSTLGPNVSLQEAARKTLWALENDNKETLLLFKELSARLVSIQ
AQNDVFIITFKTIEEIWKFTTYLSLGIVACTLEHLLFDERYWLNSALVEDTEVQVSVNQD
ELATLYLGLLLQEGCFYARAVVHDAGAQVDDGKSEFLAVSMNDVVYMKDIGDESSWEGQS
LSTGERGLLPIISVEPLPHPFYQWFLKVYPISCNVTEQNCRNITSQPIGSGQCTARESHT
ATEWDELSYCRGDAIEVVGFFVPGLKWFVGRCPSTGMIGFVQTRHVDPNCLKALCKDLLF
LSEEEKISLNSFDDEAHRGSADLLRSLAQTDITSVYRMDGLDPVEIYLKSSFGTREDYGE
IQIPDCWEESEAVTDSSKCSISEKSTPDSEWKYGVESFHVPGQEDIDDPKFFVDLNASDL
EDCEVFDPILTFLNKEGYDSHFQPLYDLSMTFLSSTFYGFSEEEDLVMYLETSRNWAKRN
NMSWAHVRCCFLLGRICAKRMKLSQARVYLEEALSAINQGFRDLHLLAALYGNLSAIYLK
QNLRTKQDLLLEKAASLLTCLPQHNFSSENELEVLKYVFRKAVIVNNASLESRVCFLIFR
LLHQLGRHDEALPFLERLQFLLITSCSQTLNSTTSVLPILSYLYDKKYLPHVALSSARLC
KTVGMKTLPSPLWRVAVVMQNLSKIMGCPLKGKYIPAQAAPYLKHALSSSYENGDVKAQR
TLCLILAKLYLQHCLLPGAVGYTKRAVELGRWTSEEEAFESSLFLGWLYILDGQFEGACN
ILMPLLDSMQETDSTTQCGVVHNLLANAQKMNKQILESSRGYSYALKMATETGNRRNQAI
ALANFGRLAVFCQAYIMAERYFVKSTQLFMDVQGCDDAERELAQVLHWFGNILIPQHRLE
DGRVCYELALLFAMKSNNLKSQLRIIEELFNFYSEVCPTTGAQITYCEHWVLIVQQLRDR
QKEGDVLSILSKLYQTLNTDKSLRKALDYTKQSLRISIDLGQHEKSAERWIQAGKLYHLL
REDELVEIYLHAGIQASQSSEHFTATLHLYEAAGDVFFHGLQKRDKALPFYKEGALPLAK
KLEDTKSQLRLYHKLTQLLISQGDYKASLEFATMAVRLGTLVEDPLQELVAFHRLAGVYY
TLQIYEIAEYCYLKALSVCSSSIQHAVEAAYYVKVYWRLGDIALNRRKDADDAATYLCLA
LAAAIEVGNEEFQLLLMEKISDVYGKFLCDGEH
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaaggtcagagaaatggaagcatcttttccagattgtccaagaacaccaaa
tctgacgccagtagtgagtcttggtataataactgctatactgaagaaagaacaacttac
tccttttggaaagctttacataggcgaacgtcaacatttgtgtccactgcaggtagaggc
tccatagacagcacagactctggattcctgaccagctggtcactttggcaaagctgcagc
acacaccggcaacaacgatgtcccgacgtggaaacaatggcatcagatgacccggaggaa
tcagagcttggctctgtggccgtggggaccccactggggaaggactgtatctccctggga
gtgggagaaggatttatcactgaaatctccctgtccttctccatcctgcgacgctccacc
ctgggccctaatgtctctctgcaggaggcagctaggaagactctgtgggctctagaaaat
gataacaaggaaacgctgttactatttaaggagctgtctgcccggctagtgtccatccag
gcccagaatgatgttttcattatcacctttaagactatagaggaaatctggaagtttact
acttacctctcactaggtattgtggcttgcactttagaacatctgctcttcgatgagaga
tactggttgaattctgcgctggtagaagacactgaagtacaagtatctgtaaatcaggat
gaattggcaacactgtatcttggcctccttctccaggaagggtgcttttatgctcgagct
gtggttcatgatgctggcgctcaggtggatgacggaaagtctgagtttcttgcagtttct
atgaatgatgtagtctatatgaaggacatcggtgatgagtcatcatgggaaggccagtca
ctgagtacaggggagcgtggattattgcccatcatatcagtggagccactgcctcatcct
ttttaccaatggtttctaaaagtgtaccctatatcctgtaatgtgacggagcagaactgc
cgtaacatcacatctcagccaataggatcagggcagtgtactgcgagagaaagtcataca
gcaacagaatgggatgaactgagctactgcaggggagatgccattgaagttgttggtttc
tttgtgcctgggctcaagtggtttgttggaaggtgtccttcaactggaatgattggtttt
gtacaaacaaggcatgtggatccaaactgtctgaaagctttgtgtaaagacttattattt
cttagtgaggaggagaagatttccttgaactcttttgatgatgaagctcatagaggctct
gcagatcttctccgtagtttggctcagactgatatcacgtcagtgtacaggatggatggt
ttggatcctgtggaaatatacttaaaatcttcttttgggacaagggaagattatggtgaa
attcagatacctgactgctgggaggaaagcgaagctgtaactgattcatcgaaatgtagt
atctctgagaagtcaacaccagattctgagtggaaatatggagtagagagcttccatgtt
cctggtcaagaagatattgacgaccctaaattttttgttgacttaaatgcaagtgactta
gaagactgtgaagtttttgatcctatcttgacatttctcaacaaggagggctatgactct
cattttcagcccttatacgacctctcaatgacttttctcagctccacattttatggattt
tctgaagaggaagacttagtcatgtacttggaaacatctcggaactgggcaaagagaaat
aacatgtcttgggctcatgttcgttgttgctttcttcttggacgtatttgtgctaagcgg
atgaaactttctcaagcgagggtttatcttgaagaagctttaagtgccattaaccaggga
tttcgtgacctgcaccttttggctgccctgtatgggaacttatcagctatctacttgaaa
caaaatttgagaactaagcaagacctgttgctggaaaaggctgccagtcttttaacatgc
ttaccacagcataattttagctctgagaatgagctggaggtgctaaaatatgtttttagg
aaagctgtcattgtcaataatgcctccctggaatccagagtttgcttcctcatattccgg
ttactccatcagcttggtagacatgatgaagcccttccctttctagaacgtctacagttc
cttctcatcacctcatgctctcagactttaaactccactacaagtgtgttgccaatttta
agttacttatatgacaagaagtatctgcctcatgttgctttgtcatcagccagattgtgc
aaaacagttggcatgaaaacattaccctctcctttgtggagggtagcagttgtcatgcag
aacttatccaaaatcatgggttgtcctctgaaagggaaatacattccagcccaggctgcc
ccatacttgaaacatgctttgtcctcttcatatgaaaatggtgatgtaaaagcccagagg
acgctgtgtcttattttagctaagctctatctacaacattgtcttctgccaggtgccgtt
ggctacacaaaaagggctgtggaactggggagatggacaagtgaagaagaggcttttgaa
tcctctctgtttctgggatggctgtatatactggatggccagtttgaaggggcttgtaat
attcttatgcctctgctagactccatgcaggaaactgacagcaccacacagtgtggtgtt
gtacacaatctccttgcaaatgcacagaagatgaacaaacagatacttgaatcttcaaga
gggtattcttatgctcttaagatggctactgaaacggggaacaggcggaaccaagccata
gccctagcaaactttggaaggttggcagtgttctgtcaagcatatattatggcggagagg
tattttgtaaaatccacccagctttttatggacgtgcagggttgtgatgatgcagaaagg
gaactggcacaggttctccattggtttggaaacattctaattccacaacataggctggaa
gatggaagggtgtgttatgaactggctttgctatttgcaatgaaatccaacaatctgaaa
agtcagctcagaatcattgaagaattgttcaatttctacagtgaagtatgtcccaccact
ggagcacaaataacatactgtgaacactgggttctcattgtacagcagctgagggacaga
caaaaggaaggagatgtgctgagtattctgagcaagctctaccagactctgaacactgac
aagtccctaaggaaagcactagattatacgaagcaaagtctaaggatttccattgacctg
ggacagcatgagaagtctgctgaaagatggatacaagctggaaaactgtatcatctactg
cgagaggatgagcttgttgagatttatctgcatgctggaatccaggcttcccagagctcc
gagcactttactgctacattgcacttgtatgaagctgcaggagatgtgttcttccatggg
ctacagaagagagacaaagctctgcctttttataaggaaggcgctctgccactagcaaag
aagttggaggacacaaaatcgcagctgcgactttaccataaactcactcagctactaata
agccaaggagactataaagcgtcgctggaatttgccactatggcggtccgactcggcacg
cttgtggaggacccattacaagagctggttgcattccatcgattggcaggagtttactac
actttgcagatttatgagattgcagagtactgttacctcaaggcgctgtcagtgtgttct
tcatcaattcaacatgcagtagaggctgcctattatgtcaaggtctattggcgtctgggg
gacatcgcactcaataggagaaaggatgctgatgatgcagctacctacctctgcctggcc
cttgctgctgctattgaagtcggaaatgaagaatttcagctgctgctcatggagaaaatt
tcagatgtatatggaaagttcctgtgtgatggagagcattaa
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