Rana temporaria (common frog): 120932405
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Entry
120932405 CDS
T07929
Name
(RefSeq) core histone macro-H2A.1 isoform X1
KO
K11251
histone H2A
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03082
ATP-dependent chromatin remodeling
rtem04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120932405
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120932405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120932405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120932405
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
120932405
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120932405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Clp_N
YihI
Motif
Other DBs
NCBI-GeneID:
120932405
NCBI-ProteinID:
XP_040200683
LinkDB
All DBs
Position
3:293847134..294057772
Genome browser
AA seq
372 aa
AA seq
DB search
MSSRGGKKKTTKTTRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVSPRHILLAIANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGT
KGKLEAIITPPAAKKAKTTSPKISTSKKPGAKKGVRKSKKKQGEVSKAASADSTTEGAPT
NGFTILSTKSLFLGQKLNLIHSEISNLAGFEVEAVINPTNADIDLKDDIGSALEKKGGKE
FLEAVIELKKKNGPLDVAGAAVSSGHGLPAKFVIHCNSPSWGSDKCEELLEKTVKNCLAL
ADEKKIKSIAFPSIGSGRNGFPKQTAAQLILRGISNYFVSTMSSSIKTVYFVLFDSESIG
IYVQEMAKLDAN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcagaggtgggaaaaagaagaccacaaagaccacaagatctgcaaaggctggg
gttatattcccagtgggaagaatgctgcggtatataaagaaaggtcatccaaaatacagg
attggagttggggctcctgtgtatatggctgctgtgctggaatatttgaccgctgagata
cttgagctggctggaaatgcagctagagataacaaaaaaggcagagtttcgcccagacac
attctgcttgccatagccaatgatgaagaactaaatcagctattaaaaggtgtcaccatt
gccagtggtggtgtgttaccaaatattcatcctgagctgttggcaaagaagcgtggaacc
aaaggaaagttggaggctattattacaccaccagctgcaaagaaagccaaaaccacatca
ccaaaaatatcaacttcgaaaaagccaggtgccaaaaagggagtccgaaaatccaagaag
aaacaaggagaagttagtaaagctgcaagtgcagacagtacaacagaaggggcaccgacc
aatggattcacaatcctttctaccaaaagtcttttcctgggacagaagctgaacctcatt
cacagtgagatcagtaatttagccggatttgaggtggaggctgttatcaatcctaccaat
gctgacattgaccttaaagatgatataggtagtgccttagagaagaaaggaggcaaagag
tttttggaagcagtaattgaactgaaaaaaaagaatggacccttagatgttgctggtgct
gctgtgagttcaggccatgggctccctgcaaagtttgtaatccactgcaacagcccaagc
tggggctctgacaagtgtgaagaattgctggaaaagacagtgaagaactgcctggcttta
gcagatgagaagaaaattaagtcaattgcttttccctcaattggcagtggaagaaacggc
tttccgaagcaaacagctgctcaactcatcctgagaggcatttccaactattttgtgtct
acaatgtcctcttcaatcaagactgtgtattttgtgctatttgacagtgaaagcataggc
atatatgtgcaggagatggcaaagcttgatgccaactaa
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