Rana temporaria (common frog): 120936341
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Entry
120936341 CDS
T07929
Name
(RefSeq) ornithine decarboxylase 1-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00330
Arginine and proline metabolism
rtem00480
Glutathione metabolism
rtem01100
Metabolic pathways
rtem04148
Efferocytosis
Module
rtem_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
120936341
09106 Metabolism of other amino acids
00480 Glutathione metabolism
120936341
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120936341
Enzymes [BR:
rtem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
120936341
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
DUF5448
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
120936341
NCBI-ProteinID:
XP_040204531
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Position
4:85876953..85902247
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AA seq
449 aa
AA seq
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MNSFDFSFLEEGFTARDILEQKINEVSLSDDKEAFYVADLGDIVKKHIRWLKALPRVTPF
YAVKCNDGKAIVKTIANLGAGFDCASKAEVKIIQNIGVQPERIIYANPCKQISEIKYAAS
CGVEKMTFDSEGELMKVAKNHPNAKLVLRIAADDSKAVCKLSMKFGATLKTSRLLLERAK
ELNIDVIGVSFHVGSGSRDPQTFVQAISDARCVFDMGAELGFNMHLLDIGGGFPGSKNSM
LKFEEVTSVINPALDKYFPASSGVQIIAEPGRYYVASAFKLAVNIIAKKVTLTEQMGYDD
EDDASKKTLMYYVNDGIHGSFNLISRSKMEMCIVRKKKSKSDERLYSSSIWGPTCDGQDC
IIEQCDLPELHVGDWILFENMGAYTMVASSAFNGFQRPTLYYVMSRAHWKFMPTLQEHGI
IPEVPELSDVHVSCVAKNRIELNSIACVV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaatagctttgactttagcttccttgaggaaggattcactgcccgggacatcctggaa
cagaaaatcaatgaagtttccttgtctgatgacaaggaggctttttatgtagctgatctt
ggtgacattgtaaagaaacatattcggtggcttaaagcacttccacgtgtaactccattt
tatgccgttaaatgtaacgacggcaaagccattgtgaagacaatagccaatttgggggca
ggatttgattgtgccagcaaggctgaagttaagattatccagaacattggtgtccaacca
gagagaatcatttatgccaacccatgtaaacaaatttcagagataaaatacgcagcaagc
tgtggtgttgagaagatgacatttgatagcgaaggggaactaatgaaagtggccaagaat
caccccaatgccaagcttgttttgcgaatagccgcagacgactccaaggctgtatgtaag
ctcagtatgaagtttggtgccactcttaaaacaagcaggttgcttctggagcgtgctaaa
gaattgaacattgatgtcattggcgtaagcttccatgttggcagtggcagcagagatcca
caaacctttgtacaagctatatctgatgctcgctgtgtctttgatatgggggccgaactt
ggtttcaacatgcacctacttgacattggtggcggcttccctggatccaagaattccatg
cttaaatttgaagaggtgacatcagtgataaatccagctttggataaatatttccctgct
agctcgggtgtacaaattattgcagagcctgggagatactatgtggcatccgcatttaaa
ctggctgtcaatattatcgccaagaaagtcacgctgactgaacagatgggctatgatgat
gaagatgatgcttccaaaaaaacgctcatgtactatgtaaatgatggcatccatggctcc
ttcaacttaatctcaaggtcgaagatggaaatgtgcatagtcagaaaaaagaaatccaaa
tcagatgagagactctattctagcagcatttggggaccaacttgtgatgggcaggattgc
attattgaacaatgtgacctaccagagctgcatgttggggactggatactgtttgagaac
atgggtgcctacaccatggttgcatcgtctgcattcaatggatttcagcgaccaactctc
tattacgttatgtcaagagcacactggaaattcatgcctactctccaagaacatggtatt
attcctgaggtgccggagctgagtgatgtccatgtttcctgtgtcgcaaagaatagaatt
gagctgaattccattgcttgtgttgtgtag
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