Rana temporaria (common frog): 120944042
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Entry
120944042 CDS
T07929
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120944042
Ion channels [BR:
rtem04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120944042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
FraC
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
120944042
NCBI-ProteinID:
XP_040213741
LinkDB
All DBs
Position
6:complement(169849380..170167065)
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AA seq
2023 aa
AA seq
DB search
MAQARLVPPGPDSIRYFTRESLEAIEKRITEEKAKKPKQEHKLDDDENGPKPSSDLEAGK
SLPFIYGDLPPGMSSEPLEDLDPYYMNQKTFIVLNRGKTLFRFSATSAVYILTPFNPLRK
VAIKVLVHSLFSMLIMFTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGFC
LEKFTFLRDPWNWLDFSVIVMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGHLRNKCLLWPPLYSGSEMNITSYINGTM
NNNSTFFNRTFPEYDWQEYVEDESHFYKQEGQKDFLLCGNSSDSGQCPEGYMCIKIGRNP
NYGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEDAQAAAIAALNLSKEYSEDGGF
GPLSESSSEASKLSSKSAKDRRNRKKKRRQKELGEDDEKGDNEKFPKSESETSIKRKGFR
FSIEGNRLTYENKFSSPHQSLLSIRGSLFSPRRNSRASIFSFRNRAKDIGSENDFADDEH
STFEDNESRRGSLFVPHRHGERRNSTISQTSKSSKAVLPVNGKMHSTVDCNGVVSLMGGP
SVPTSPVGLLLPEVIIDKPASDDNGTTTETEIRKRKASCYQVSMDLLEDPIVTRQRALSV
ASILTNTMEELEESRQKCPPCWYKFANTFLIWDCSDSWLRIKHIVKLVVMDPFVDLAITI
CIVLNTLFMAMEHYPMTEEFNYVLSAGNLVFTGIFTAEMIFKLIALDPYYYFQEGWNIFD
GIIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKSYKECVCKISEDCELPRWHMNDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQSMCLLVFMLVMVIGNLVVLNLFLALLLSSFSSDNLTATDDDNEMNNLQIAV
GRIHVGIDFVKKTMRECMQKAFVKKQKALDEIKPLEELHNRKESCLYNHNAVDINKDLDY
HKGGNGTTSGVGSSMEKYIIDESDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSESD
LEESKEKLNMTSSSEGSTVDIRPPGIVVEGEGELVDIEPEEAMEPDACFTEGCVKRFPIC
TVNIDEENGKTWWRFRKTCYTIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIKTML
EYADKVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAI
KSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK
YYHCVNTTTGEMISITKVENQSECMQLIKANESARWKNVKVNFDNVGAGYLALLQVATFK
GWMDIMYAAVDSRKLQEQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKK
FGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPPNRYQGFVFDIVTRQAFDITIMILIC
LNMVTMMIETDEQSDDMENNLYWINLVFIVLFTGEFIMKLVSLRYYYFTIGWNIFDFVVV
ILSIVGMFLADMIENYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFN
IGLLLFLVMFIYAIFGMSNFAYVKKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAP
ILNSGAPDCDPHAEHPGSSVRGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVA
TEESAEPLGEDDFEMFYEVWEKFDPDATQFIQYSKLPDFADALDPPLRIQKPNRVPLIAM
DLPMVSGDRIHCLDILFAFTKRVLGEGDEMDNLRQPMEERFMASNPSKVSYEPITSTLRR
KQEELSVVIIQRCFRRYILRKTIKQASLMYRKDKMKEVNCLPIKEDMGIDKLNGNSTSDK
TDITPSTTSPPSYDSVTKPEKEKHEKDKAEKEDKSKDARENKK
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggcacgacttgtaccaccaggacccgacagcatccgctatttcaccagggaa
tccctcgaagctatcgagaaacgcatcacagaggaaaaagcaaagaaacccaaacaagag
cacaaacttgacgacgacgaaaatggccccaagccaagcagtgacttggaagcgggcaaa
agtctgccatttatatatggcgacctaccacctggaatgtcatcagagccactggaggac
ctagacccatattatatgaatcagaaaacttttatagtgttgaatagagggaagacactc
ttccgtttcagtgccacgtctgccgtgtacattttaacccccttcaaccctcttagaaaa
gtagctattaaagttttggtacattcattattcagcatgctcattatgttcactatcttg
accaactgcgtgttcatgaccatgagtaatcccccggaatggacgaagaatgtagaatac
acatttactggaatctatacattcgagtctctgataaaaattctcgcaaggggtttttgt
ctagaaaaatttactttcctaagagacccatggaactggctggatttcagtgtaatcgtt
atggcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtactgagagctttgaaaacaatttctgtaattccaggcctgaagaccattgtgggtgcc
ctgattcagtcggttaagaagctttcggatgtgatgattctcacagtgttttgtctgagt
gtctttgcactaataggactacagctttttatgggacacctacggaataaatgcttactg
tggcctccactatacagcggttctgaaatgaatatcacatcctacatcaatggcacaatg
aacaacaacagcacgtttttcaatagaacctttcctgaatatgactggcaggaatacgtt
gaagatgaatcacacttttacaagcaagaaggtcagaaggattttttgctgtgcggtaac
tcatcagattcaggtcaatgcccagaaggatatatgtgtattaaaattgggagaaacccc
aactatgggtatacgagttttgatacattcagctgggcgttcttatccttgtttcgacta
atgactcaagactactgggagaacctctatcagctgactcttcgagccgctggtaagacc
tacatgatcttctttgtgctggtgatctttttgggctccttttatctggtcaatctgatc
ctggctgtggtagctatggcgtatgaggaacagaatcaggcaacattggaagaagcagag
cagaaagaagctgaatttcagcaaatgttggagcaacttaaaaaacaacaagaagatgct
caggcagcagctatagcagcactaaatctatcaaaagagtacagcgaagatggtggcttt
ggaccactttctgaaagttcatcagaggcttccaagctaagctccaaaagtgccaaagac
cgacggaaccggaagaagaaaagaagacagaaggagcttggagaggatgatgagaaaggg
gacaatgagaaatttccaaagtctgaatcggaaacaagtatcaagaggaaaggttttcgt
ttctctattgaaggaaaccggctgacctatgaaaacaagttctcttctccgcatcagtca
ttgttgagtatccgtggatctctattttctccaagacgtaacagcagagccagcatcttc
agcttcagaaaccgtgcaaaagacattgggtcagagaacgactttgcagatgatgaacac
agcactttcgaggacaatgagagcagaagaggttctttatttgtacctcacagacacgga
gaaaggcgaaacagcactatcagccaaactagtaaatcgtccaaggcagtgcttccagtg
aatgggaagatgcacagcacagtggactgcaatggagtagtgtctctaatgggaggtcca
tctgtcccgacatcgcctgttggacttcttctgccagaggtgataatagataaaccagct
tctgatgacaatggaactacgacggagactgagataagaaagcgtaaggcgagctgttat
caggtttctatggatctgttggaagatccaatagtcacgagacagagagccttgagcgtt
gctagtattttgaccaacacaatggaagaacttgaagaatccaggcagaagtgtcctcca
tgttggtacaagtttgcaaacaccttcttaatctgggactgctctgattcgtggctgagg
ataaagcatattgttaagctggttgtaatggatccttttgtggacctggctataacaatt
tgcattgttctaaacacattattcatggctatggaacattaccccatgaccgaagaattt
aattacgtccttagtgctggaaacttggttttcactggaatctttacagcagaaatgata
tttaagctgattgccttagatccatactattatttccaagaaggctggaacatttttgat
ggtatcattgtgagcctcagtttaatggagttgggtctggctaatgtggaaggattatca
gtgcttaggtcattcagattgctccgagtcttcaagttggcaaaatcatggcctaccctc
aacatgctgatcaagatcattggtaactctgtaggagctctgggaaacttgactttggtg
ttggccatcattgtgtttattttcgctgtggtgggcatgcagctgtttggtaaaagctac
aaggaatgtgtctgcaagatctcagaggactgtgagcttccacgctggcacatgaatgac
ttcttccattccttcctaattgtgttccgtgtattgtgtggagaatggatcgagactatg
tgggactgtatggaggttgctggacaatctatgtgccttttggtcttcatgttagtgatg
gtcattggcaatcttgtggttttgaatttgttcctggccttgttgctgagttcatttagt
tccgacaacctcacagcaacagatgatgacaatgagatgaacaaccttcagattgctgtg
ggaagaatacatgtgggaatagattttgtaaagaaaacaatgcgagaatgcatgcaaaaa
gcctttgtgaagaaacagaaagctctcgatgaaatcaaaccactcgaggagctgcacaat
cggaaagagagctgtctttataaccataatgccgttgatattaataaagacctagattat
cacaaaggtggcaatggaactacaagtggagtaggcagcagtatggaaaagtatattatc
gatgagagtgattacatgtcctttatacataacccaagcctcaccgtgactgttcccatc
gctgttggggaatctgattttgaaaatctcaatacagaagacttcagcagtgaatctgac
ctggaagaaagtaaagagaagctgaacatgaccagctcatctgaaggtagcacagtggat
atcaggccccctgggatagttgtggaaggagaaggggagctggtggatattgaaccggag
gaagctatggagccagatgcctgcttcacagaaggatgtgtaaaaaggtttccaatttgc
actgtgaacattgatgaagaaaatggcaagacttggtggagattcagaaaaacctgctac
acaattgttgaacacaactggtttgaaaccttcattatcttcatgattcttcttagtagt
ggagcattagcttttgaagatatctacatagaacaaaggaaaacaattaaaaccatgctg
gaatatgctgataaagtcttcacgtacatctttatccttgaaatgcttctgaaatgggtg
gcctatggatttgtaaaatatttcaccaatgcctggtgctggttggacttcctgattgtt
gatgtgtctctcgttagcttagtagccaatgccttgggatactcagaactaggggctatt
aagtccctaaggacattaagggccttgagaccactaagagccctttcacgttttgaaggg
atgagggtggttgtaaatgcactgatcggagccattccctccattatgaacgtgctactg
gtttgtctgatattctggttgattttcagtataatgggcgtcaatttgtttgcgggaaag
tattatcattgcgttaatactactactggtgaaatgatctcaattactaaagttgaaaac
cagtcggaatgcatgcagctaataaaggccaacgaaagtgcgaggtggaagaacgttaaa
gtcaattttgataatgtaggagctggttatcttgctttactccaagtggcaacgtttaaa
ggctggatggatattatgtacgctgcagttgactcgcgaaagctgcaagagcaacctaaa
tatgaagacaacttatatatgtatttatactttgtcatctttatcatatttggctccttt
ttcactctgaacctcttcattggtgttattattgacaatttcaaccaacaaaaaaaaaag
tttggaggtcaagacatcttcatgacagaggagcaaaagaaatattataatgccatgaaa
aaactggggtccaagaagccacaaaagcccattccaagaccaccgaacagataccaaggt
tttgtgttcgatattgtaacaaggcaagcttttgacatcaccatcatgatacttatttgc
cttaacatggtaacaatgatgattgaaacagatgaacaaagcgacgatatggaaaacaac
ttgtactggatcaacttggtcttcattgtcctgttcactggtgaatttattatgaaactg
gtctcactgcggtattattacttcacaattggctggaacatatttgattttgttgttgtc
attctctctattgttggcatgtttctggctgacatgatagaaaactattttgtttctcca
acattattcagagttataagacttgccaggattgggagaatcttgcgtctcattaaagga
gcgaagggaattcgtactctgctttttgctttgatgatgtcacttcctgccctgttcaat
attggtcttctgttgtttttagtgatgttcatttacgctatctttggaatgtccaacttt
gcctatgtcaagaaagaagcaggaattgatgacatgtttaattttgaaacatttggcaac
agtatgatttgcttattccaaatcactacatcagctggatgggatggcttattagcacct
attctgaacagtggagcaccagactgcgacccacatgcagaacaccctgggagttcagtc
agaggggattgtggaaacccctctgttgggattttcttctttgtgagttatatcatcata
tcatttttagtggtggtaaacatgtatattgctgtaattttggaaaactttagtgttgct
acggaggaaagtgcagaaccccttggagaggatgactttgagatgttttatgaagtttgg
gaaaagtttgatccagatgcaacacaatttattcagtacagtaaattgcctgattttgct
gacgctctggatccacctcttcgtatacaaaaaccaaacagagttccgcttattgcaatg
gatcttcccatggtaagtggtgaccgaattcattgccttgacatcttgtttgcctttacg
aagcgagtgttgggtgaaggagacgaaatggataatcttcgccaaccaatggaagaacgg
ttcatggcatccaacccttcaaaggtctcctatgaaccaattacatctaccttaaggaga
aaacaagaggaattgtcagtggtcatcattcagcgttgtttccggcgctatattttacgg
aaaactattaaacaagcttcattaatgtatagaaaagataaaatgaaagaagttaattgc
ttgccaattaaagaagacatgggtattgataagcttaatgggaactcaacttcagataag
actgatataacaccctctacaacatcacctccatcatacgatagtgtaacaaaaccagaa
aaggaaaaacatgaaaaagacaaagcagaaaaagaggacaaaagcaaagatgccagggag
aataaaaaataa
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integrated database retrieval system
