Rana temporaria (common frog): 120944060
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Entry
120944060 CDS
T07929
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120944060
Ion channels [BR:
rtem04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120944060
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
ATP-synt_B
IQ
FraC
Motif
Other DBs
NCBI-GeneID:
120944060
NCBI-ProteinID:
XP_040213768
LinkDB
All DBs
Position
6:complement(173853903..174070252)
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AA seq
1979 aa
AA seq
DB search
MAQQRIVPPGPDSFRLFTRESLKAIEKRISEEKNAKSKQESEEDGPKPNSDLEAGKKLAF
IYGDIPPGMVSEPLEDIDPYYANQKTFIVLNRGKAIFRFSATSALYILTPFNPVRQAAIK
ILVHSLFSMLIMFTILTNCVFMTMSNPPDWAKNVEYTFTGIYTLESLIKILARGFCLEKF
TFLRDPWNWLDFSVILLAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQS
VKKLSDVMILTVFCLSVFALIGLQLFMGHLRNKCMHLPSELPPNISLEEYAKDESLFYKM
EGQKDPVLCGNSTDAGQCPEGYTCVKVGRNPDYGYTSFDTFGWAFLSLFRLMTQDCWENL
YMKTLRADGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEEQNQATMEEAEQKAAEFQKM
MEQLKRQQEEAQAVAAGAETMGESQVLSEEGEMDDPSETSSIISKLSSKSAKDRKNWKTQ
RENVEQCTKEEEKRDEEKCCISASEDNAKRKGYHFNREAHQLEYYRKPSSPRESQLSVRG
PLLTPRRNSKVSIFSFRDPARDVGSENDFADDEHSTFEDNEKDSVSLPGRQGERRASNAS
LTSRSSRILPLLPMNGKMHSAVDCNGVVSLVSGSGPPTGLYPEGTTTETDVNRRRPSSYK
ISMDLLEDPSARQRALSIATILTNTMEELEESRQQKCNPCWYKFARCFLIWDCCDLWLKI
KDIVTLIVMDPFVDLAITICIVLNTIFMAMEHANMTKDFIHVLSVGNLVFTGIFTAEMVF
KLIALHPYYYFQEGWNIFDGIIVSLSLMELGLSTTGGFTVLRSFRLLRVFKLAKSWPTLN
KLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKISEDCELPRWHMNDF
FHSFLIVFRVLCGEWIETMWDCMEVAGQSLCILVFMLVMVIGNLVVLNLFLALLLSSFSS
DNLSATDDDGEMNNLQIAVGRIQRGMSYIRKCLQDFFQKLFLRAKKDADDTKQLEELRIQ
RDNGVYSNIVVQNIKEQDYNREASGTTSGIGSSVEKYGGDEKDGMAVSNQQCLTVAVPIA
AGESDFDNPNTEDFSSESDPEESKEKVKLSSSSEGSTIDIRPPGLEGEDNYLGYVYEETL
EPEPCFTDGCVNKCTCCRINIEEGRGKTWWSLRKTCYLIVEHSWFESFIILMILLSSGAL
AFEDIHIEKHKTMKTVLEYADKVFTYIFIAEMLLKWVAYGFVTYFTNAWCWLDFLIVDIS
LVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCL
IFWLIFSIMGVNLFAGKFYYCDNTTSGVMFPITEVDNRSDCFHISNTTKDARWRNVKVNF
DNVGAGYLALLQVATFKGWTPIMYAAVDSRGTEQQPNYEDNLYMYIYFVIFIIFGSFFTL
NLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPKNFFQGMIF
DFVTKQTFDIFIMCLIFLNMVTMMIETDDQSKEMENRLYWINVVFIILFTCEFLLKFISL
RQYYFTIGWNIFDLVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKG
IRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEGGIDDMFNFETFGNSMI
CLFMITTSAGWDLLLAPILNSAAPDCNPNFEHPGSSVKGDCGNPSVGIFFFVSYIIISFL
IVVNMYIAVILENFSVATEESAEPLGEDDFEMFYEVWEKFDSTASQFIEYSKLFDFADSL
EPPLRVPKPNRIQLISMDLPMVSGDRIHCLDILFAFTKRVLGEGEDMDNLRLPMEERFMA
SNPSKVPYEPITTTLLRKQEEMSAVAIQRCYRRYHSKKQLARTSLEGQREKNKRASVRAK
NNRSALNKYNENSSTVESDMSTATTSPPSYDSIEKTPEKYEKKRSQKEDICRDKKGCKK
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaacggattgtaccacctgggccagacagctttcgactttttaccagggag
tctctcaaagccattgagaaacgtatttcagaggagaaaaatgccaagtccaaacaagaa
agtgaagaagatggtccgaaaccaaatagtgacttggaagctggtaaaaagctggccttt
atatatggtgacatccccccaggaatggtatcagaacccctggaggatattgatccatat
tatgctaaccagaagacctttatagtattgaatagagggaaggcaatcttccgcttcagt
gccacgtctgccttgtacattttaacccccttcaaccctgtgcgtcaagcagctataaaa
atactggtacactcattattcagcatgctcataatgttcactatcctcaccaactgtgtg
ttcatgaccatgagtaatcccccggattgggccaagaatgtagaatataccttcactggg
atttatactttagaatcgctgatcaaaattcttgcaaggggcttctgtttagaaaagttt
actttcctgcgcgatccttggaattggctggatttcagtgtcatcttgcttgcgtatgta
acagaatttgtaaacctaggcaatgtttcagctctgcgaactttcagagtattaagagct
ctgaaaactatttctgtaattccaggcctgaagaccattgtgggtgccctgattcagtcg
gttaagaagctttcagatgtgatgattctcaccgtgttttgtctgagtgtgtttgcgctg
attggactgcagctattcatgggacacctacggaataaatgcatgcacctgccatcagag
ttacctcctaatataagccttgaagaatatgcaaaagatgaaagtttgttttataaaatg
gaaggtcagaaggatcctgtactttgtggcaacagcacagatgctggtcagtgcccagaa
gggtacacgtgcgtgaaggtgggaagaaatccagattatggatacacaagctttgacacg
tttggttgggcatttttatcgctctttagactgatgactcaggactgctgggagaacctg
tatatgaaaacccttcgagctgatggtaagacctacatgatcttctttgtgctggtgatc
ttcttgggctccttttatctggtcaatctaatcctagctgtggtagctatggcttatgaa
gaacagaatcaggcaacaatggaagaagcagagcagaaagctgcagagtttcagaagatg
atggagcagctgaaaaggcaacaagaagaagctcaggctgtagcggcaggagctgagaca
atgggagagtcccaggtcctaagtgaagaaggtgaaatggatgacccttcagagacctct
tctataatatcaaagctaagttctaagagtgccaaagacaggaagaactggaagacccaa
agagaaaacgtagaacagtgtactaaggaagaggagaaaagggatgaggagaaatgttgt
atatctgcatctgaagacaatgcaaagaggaaaggctatcactttaacagggaagcccat
cagttggaatattataggaagccatcatccccgagagagtcacagttgagtgtccgtggc
cccctcttaacccctagacgtaatagcaaagtcagcattttcagtttcagagatcccgct
agggatgtggggtcagagaatgattttgctgacgatgaacatagcacttttgaagataat
gaaaaggattctgtatctctgccgggtagacaaggagaacggcgtgccagcaatgccagc
ctgacgagtcgatcatctaggattctgcctctacttcctatgaatggtaaaatgcacagt
gcagtggattgcaatggagtggtctccttggtcagcggctctggtcctcctactggactt
tatcctgagggcaccaccacagagactgatgtaaacagaagaagaccaagttcatacaaa
atttccatggacttgctggaagacccatctgccagacaaagggctctcagtattgctaca
attttaacaaacacaatggaagaattggaagaatcgagacaacagaaatgtaatccttgc
tggtacaaatttgctaggtgctttttaatttgggactgctgcgatctgtggctgaaaatt
aaagacatagtaacgttgattgtgatggatccatttgtggacctcgctattaccatctgc
attgtgctgaacaccatatttatggctatggagcatgccaacatgaccaaggacttcatt
catgtgctttccgttggaaatctggtttttacaggaattttcacagctgaaatggttttt
aagctcattgctcttcatccatactattatttccaagaaggctggaatatctttgatggg
attatcgttagtcttagtttaatggaacttgggctttcaacaacaggaggattcactgtt
ctacgatcctttagactgctccgagtattcaagttggcaaaatcatggcctacactcaac
aagttgatcaagatcattggtaactctgtgggagctctgggaaacctgaccttggtgttg
gccatcattgtgtttatttttgctgtggtcggcatgcagctttttggcaaaaactacaag
gagtgtgtctgtaagatctcagaggactgtgagcttccacgctggcacatgaatgacttt
ttccattccttcctcattgtgtttcgagtactgtgtggagagtggatcgaaactatgtgg
gactgtatggaggtggctgggcagtctttgtgcatactggtgttcatgttggtgatggtg
attggaaatctagtggtgctgaatctgttcttggccttactcctaagctctttcagctct
gacaatctttcagctactgatgatgatggtgaaatgaataatctccagatcgcagtgggc
aggatccagagggggatgtcctacattaggaaatgcctacaagattttttccaaaaattg
ttcttaagagctaaaaaagatgcagatgacacaaaacagctggaagagctgagaattcaa
cgcgataatggtgtttacagcaatattgttgtgcagaatatcaaagaacaagattacaat
cgagaagcaagtgggacaacaagtgggataggcagcagtgtggagaagtatggaggtgat
gagaaggacggtatggctgttagtaaccaacagtgcctcaccgttgcagtgcctattgca
gccggagagtcggactttgacaacccaaacactgaagattttagtagtgaatctgaccct
gaagagagtaaagagaaggtaaaactttccagctcgtcggagggtagcacgatagacatc
agaccaccaggattggaaggagaagataattacttgggttatgtctatgaggagaccctt
gaaccagagccatgcttcacagatggctgcgtgaataaatgtacatgctgccggatcaac
attgaagaggggagaggaaaaacctggtggagcctcaggaaaacctgctaccttattgtg
gaacacagctggtttgaatcatttataatcctcatgattctacttagcagcggggccttg
gcttttgaggatattcatattgaaaagcataaaactatgaagaccgtgttggagtacgct
gacaaagtttttacctacatctttatagcagaaatgcttttgaaatgggtcgcctatgga
tttgtcacatatttcacaaatgcctggtgctggttggatttcctgattgtggatatatct
ttggtgagcctagtagccaatgccttggggtactcagaattaggagctattaagtctctt
agaacactgcgagcattgagacccctgagggccctgtcacggtttgaaggcatgagggtg
gttgtgaatgctttaattggtgccataccttccattatgaatgtgctcctggtctgcctt
atattctggctgatatttagcataatgggagtgaatctgtttgcgggtaaattttattac
tgtgataatactacatccggtgtcatgttccctataactgaagttgacaaccgcagtgac
tgctttcatatcagtaacaccactaaagatgcccgctggaggaatgtcaaagtaaacttt
gataatgttggcgcaggatatcttgctttacttcaagtggctacatttaagggatggaca
ccaatcatgtatgcagctgttgattcaagaggcacagaacaacaacccaactatgaagac
aatctttacatgtatatatactttgtaatctttattatatttgggtcctttttcaccttg
aacctcttcattggtgttatcatagataacttcaatcagcagaaaaagaagttaggagga
caagatatctttatgacagaggaacagaagaagtattacaatgcaatgaagaaacttggg
tccaaaaagcctcaaaagccaatcccgcgacctaagaatttttttcaaggaatgatattt
gactttgtcacaaaacaaacctttgacattttcattatgtgtctcattttccttaatatg
gtcacaatgatgattgaaactgacgaccaaagcaaagagatggagaacagattgtattgg
atcaatgtggtgtttattatacttttcacttgcgaattccttctaaagttcatatccctg
agacaatactacttcaccattggatggaatatatttgatttagttgttgttatactttct
attgtaggtatgtttctggcagaaatcatagaaaaatattttgtatctccaacattattc
agagttataagacttgccaggattgggagaatcctgcgacttataaaaggagccaaggga
attcgtacactactatttgctttgatgatgtcacttcctgccttatttaatatcggtctt
ctactcttcttagtgatgttcatttatgctatatttggaatgtccaacttcgcctatgtc
aagaaagaaggtggaattgatgacatgtttaattttgaaacttttggtaacagtatgatt
tgcttgtttatgattacgacctcagcgggatgggatcttctgttagcaccaattctgaat
agtgcagcaccagattgtaacccaaactttgagcatcctggaagttctgtgaaaggtgac
tgtggcaatccatcagtaggaattttcttctttgttagctacatcataatttcctttctc
attgtggtcaacatgtacattgctgtcattctggaaaattttagtgttgccactgaagag
agcgcagaaccactaggagaagatgactttgagatgttctatgaagtctgggaaaagttt
gactcaactgcttcacagttcattgaatacagtaaactctttgattttgcagattccctg
gaaccacctttaagagtaccaaaaccaaatcgcatccagctcatttcaatggatctcccc
atggtaagtggggacagaattcattgccttgacatcctctttgctttcaccaaacgagtc
ttgggtgaaggagaagacatggacaatctgcgtttaccaatggaagaacggtttatggca
tcaaatccatctaaggttccttatgagcccattacaaccaccttacttcgcaaacaagaa
gaaatgtcagctgttgccattcaacgttgctacagacgttaccactcaaaaaaacagcta
gcacggacatctctagaaggccaaagagagaaaaataaacgtgctagtgttcgggctaag
aacaacagaagtgctttaaataaatacaatgaaaactcatctacagttgaatctgacatg
tccaccgcaacaacctcaccgccttcctatgacagtatagaaaagaccccggaaaaatat
gaaaaaaaacggtcacaaaaagaagacatttgtagggataaaaagggatgcaaaaaataa
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integrated database retrieval system
