Rana temporaria (common frog): 120944061
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Entry
120944061 CDS
T07929
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120944061
Ion channels [BR:
rtem04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120944061
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQCJ-SCHIP1
GPHH
Exportin-T
IQ
RNase_H
FraC
Motif
Other DBs
NCBI-GeneID:
120944061
NCBI-ProteinID:
XP_040213769
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Position
6:174172094..174371105
Genome browser
AA seq
2019 aa
AA seq
DB search
MEQPLVPPPGPESLRLLTRESVVAIEKRFAEEKAKKPSKDRRDDDDENGPKPNSDLEAGK
GLPFIYGDLPSEMVTEPMEDLDPYYSNKRTFIVLNRGKTIFRFSATSALYILTPFNPIRK
ISIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVITMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGHLRNKCVRWPPIYEPNITSYFNASYGEN
GTYINVTLNPFDREEYILDEKNFYFLPDQRDALLCGNSTDAGQCPKGFVCLKTGRNPNYG
YTSFDTFSWAFLSLFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFLGSFYLINLILAV
VAMAYDEQNQATLEEAEQKEAEFQQMMEQLRKHQEDIQAAAIAAHEAAIGSREISGGTGY
GGLSESSSLTSMLSSKSAKERRNRRKKRKQKEQGDEKCDDEKFRKSTSENSLKKFRFPLE
GMRLPYDKKSSPHQSLLDVQEGLFSPRRNSRTSLFSFRGRGKDVGSENDFADDEHSTFED
NESRRGSLFVPRRHGERRNSNISQASKASRTLPVMPANGKLHSAVDCNGVVSLLGGPSPT
SPAGLLLPEVIIDKPASDDNGTNTEHEMRKRRLSSYHVSMDFLEDPILRQRALSIASNLT
NTMEELEESRQKCPPCWNKFANTYLIWDCCDAWLKIKHVLNVIVMDPFVDLAITICIVLN
TLFMAMEHHPITDEFANVLYVGNLVFTGIFTAEMVFKLIALDPYYYFQVGWNIFDSIIVS
LSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIV
FIFAVVGMQLFGKSYKECVCKISPDTCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQSMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLSATDEDNEMNNLQIAVARMH
IGIACVKRKVREFIQNAFVKKKKELEENKPLEDMQNQKDSCISNHTTVEIGKDFDYLKDG
NGTTATSGIGSSVEKYNIDIESDYMSFIHNPSLTVTVPIAVGESDFENLNTEEFSSESDL
EESKEKLTCSSSSEGSTVDIRPPGEDEPAALVEPEEIMEPEACFTEGCIRKFPICDVSTL
EGRGKQWWNLRKTCFRIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIKTMLEYADK
VFTYIFILEMLLKWVAYGFAKYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNMFAGKYGYCL
NMTSEQIFDIEEINNKSECDALIAANNQSARWKIVKVNFDNVGFGYLSLLQVATFKGWMD
IMYAAVDSRKVDEQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQ
DIFMTEEQKKYYNAMKKLGSKKPQKPVPRPHNKFQGAVFDFVSMQPFDITIMILICLNMV
TMMIETDDQSDEMENILYRVNAVFIVLFTGECVLKLISLRHYYFTMGWNIFDFVVVILSI
VGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLL
LFLVMFIYAIFGMSNFAYVKKESGIDDMYNFETFGNSMICLFMITTSAGWDGLLNPILNS
KYPDCDPAIEHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGVATEES
AEPLGEDDFEMFYEVWEKFDSDASQFIQYHKLTDFADALDPPLRMPKPNNVQLIAMDLPM
VSGDRIHCLDILFAFTKRVLGEGDEMDNLRQPMEERFMASNPSKVSYEPITSTLRRKQEE
LSAVVIQRAFRSYMLRKTIHRASFLYHNAKDKDADSLITRKDVLSDRLNGNSTTDKVDIT
PSTTSPPSYDSVTKPDKEKHEKDKTEKEDRAKDIRERKK
NT seq
6060 nt
NT seq
+upstream
nt +downstream
nt
atggaacagccacttgtacccccaccaggacctgaaagccttcgcctcctcaccagagaa
tctgttgttgctatcgagaagcgctttgcagaagaaaaagccaaaaaaccatcaaaggac
cgcagagatgacgatgacgaaaatgggcccaagccgaactcggacttggaagcaggcaaa
ggcttgccttttatatatggagacctaccatcggaaatggtcacggaaccaatggaggac
ctcgacccctattacagcaacaaaaggacatttatagtattgaatagagggaagacaatc
ttccgcttcagtgccacgtctgccttgtacattttaactccctttaaccccattagaaaa
atatcaataaagattttggtacattcgttattcagcatgcttattatgtgcactattttg
accaactgtgtgttcatgaccatgagtaatcccccagaatggaccaagaatgtagaatac
actttcactggaatttatacctttgaatctctaataaaaattctggcaagaggattttgc
ttagaaggtttcactttcctgcgggacccatggaactggctggacttcagtgttattacc
atggcatatgtcacagagtttgtggacctgggcaatgtctcagcattgagaacattcaga
gttctccgagcattgaaaacaatttcagtcattccaggcctgaagaccattgtgggtgcc
ctgattcagtcggttaagaagctttcggatgtcatgattctcacagtgttttgtctaagt
gtgtttgcactaataggactgcagcttttcatgggacacctacggaataaatgtgtacgg
tggcccccaatatatgaaccaaatattacctcctactttaatgcctcctatggcgagaat
ggcacctatatcaacgtaactttaaatccatttgacagagaagaatacatcctagatgaa
aaaaatttctattttctgcctgaccagagggatgcccttctgtgcggcaacagcacagat
gcaggccaatgcccaaaaggatttgtatgtttaaaaactggaaggaatcctaactatggc
tacaccagctttgataccttcagctgggccttcctgtccctgtttcgattgatgactcag
gacttctgggagaacctttatatgctgaccctgcgagctgctggcaagacctacatgatc
ttttttgttctggtgatcttcttgggctccttctatcttattaatctgattctggctgtg
gtggccatggcctatgatgaacagaaccaggcaacattagaagaagctgaacagaaagaa
gccgaattccagcaaatgatggagcagctaagaaagcatcaagaggacattcaggcagca
gcaattgcagcacacgaagcagctattggatccagagagattagtggagggacaggttat
ggaggcctgtcagagagttcatctctaacgtccatgctaagctccaaaagtgccaaggaa
agaagaaacagaagaaagaaacggaaacaaaaagaacagggtgacgagaagtgtgatgat
gagaaattccgcaagtcaacatcagagaacagcctgaaaaagttccgtttccctttagag
ggaatgcggttgccctatgacaagaaatcctccccccaccagtccctgctcgatgtccaa
gagggtctattttcaccaagacggaacagtagaaccagcctattcagttttcgaggccgg
gggaaggatgtgggatcagagaatgactttgcggatgatgaacacagcacttttgaggac
aatgagagcaggagaggctctttatttgtacctcgcagacatggggagaggcggaacagc
aatatcagccaagccagcaaggcttcaagaaccctgccggtgatgccagcgaatgggaaa
ttgcacagcgcagtggattgcaacggagtggtctctctgctgggtggaccatcaccaaca
tcgcctgctggactacttctgccagaggtgataatagataaaccagcttctgatgacaat
ggtaccaacacagaacatgagatgaggaagaggaggttaagttcctatcacgtttctatg
gattttttggaagatccaatcctgagacaaagggctttgagtatagccagcaatcttacc
aacacaatggaagaattagaagaatccagacaaaaatgcccaccatgctggaacaaattt
gccaacacctacctgatatgggactgctgtgacgcctggttgaaaataaagcatgtactc
aatgttatagtgatggacccctttgttgatcttgcaatcaccatctgcattgttttaaac
accttgtttatggccatggagcatcatcccataactgatgaatttgctaatgtgctgtat
gttggaaatctggtattcactggtattttcactgcagagatggtcttcaaactcattgca
ttagacccctactactatttccaagtgggatggaatatatttgacagtattattgtcagt
ctgagcttgatggaacttggtctgtccaatgtggaaggattgtctgtactaaggtccttt
agattgctccgagtcttcaagttggcaaaatcatggcctactctcaacatgctcatcaag
atcattggcaactctgtgggagcgctgggaaacctgactttggtgttagccattattgtg
tttatttttgctgtggtcggcatgcagctctttggtaaaagctacaaggaatgtgtctgt
aaaatatcgcctgacacatgtgagcttccacgctggcacatgaatgacttcttccattcc
ttcctgattgtcttccgagtactgtgtggagagtggatagagactatgtgggactgtatg
gaggtggctggacaatctatgtgcctaacagtgtttatgatggtgatggtcattggaaat
ttagtggtgttaaacctgttcttagctttgctgctgagctcatttagctcagacaatctc
tctgcaacagacgaggataatgaaatgaataatctacaaattgccgtggccagaatgcac
attgggattgcgtgtgtgaaaaggaaagtacgggagttcatccagaacgcatttgtgaag
aagaaaaaggagctggaagaaaataaacctctagaagacatgcagaaccagaaagacagc
tgtatatccaaccacaccacagtggaaataggcaaagattttgactacctgaaggatggg
aatggcacaacggccacaagtggtattggaagcagcgtggaaaaatacaatattgacatt
gaaagtgattatatgtcattcatacataacccaagccttacagtgactgtaccaatagct
gtaggggaatcagactttgaaaacttgaacacagaggaatttagtagtgagtctgacctt
gaagaaagcaaagagaaactgacctgttccagctcatcagaaggcagcactgttgacata
aggccacccggggaagatgaacctgcagctttagtggagccggaggaaattatggagcca
gaagcttgctttacagaagggtgtatcaggaagttccctatatgtgatgtcagtactcta
gaagggagaggcaagcaatggtggaacctaagaaaaacatgttttagaatagtagagcac
aactggtttgagacattcataatctttatgattcttcttagcagcggagctttggctttt
gaagacatttacatagaacaaagaaaaacaattaaaaccatgctagaatatgccgataaa
gtcttcacatacatctttatccttgaaatgcttctgaaatgggtggcctatggatttgct
aaatacttcaccaatgcctggtgctggctggacttcctgattgtcgatgtgtcattggtt
agcttagtagctaatgccttgggctactcagaattaggggccataaagtctcttaggaca
ctgagggcattgagacctctgagggccctgtcacgatttgaagggatgagggtggttgta
aatgcccttataggtgcaataccttccatcatgaacgtgctgctggtttgtctaatattt
tggctaatttttagcattatgggggtgaacatgttcgcaggaaaatatggctactgttta
aatatgacatcggaacaaatctttgatattgaagagatcaataataaatccgagtgtgac
gccctgatagcagccaataatcaaagcgcaagatggaaaattgtcaaagtgaactttgat
aatgttggctttggttatctatctttgcttcaagtggcaacatttaaaggctggatggac
attatgtatgcagctgttgattctagaaaggtagacgagcaaccaaaatatgaagacaat
ctatacatgtacctttatttcgtcattttcatcatatttggatcctttttcacactcaat
cttttcattggtgtcatcattgataactttaatcagcagaaaaagaagtttggaggtcaa
gatatcttcatgacagaagaacaaaagaaatattacaatgccatgaaaaaactaggatcc
aaaaagccacaaaaacctgtccctaggccacataataaattccaaggtgctgtctttgat
tttgtgtccatgcaaccatttgacatcaccattatgattttgatttgcttgaacatggta
acaatgatgatagagacagacgaccagagcgatgaaatggaaaatatcttgtacagggtt
aatgcagtcttcattgtgctcttcaccggagaatgcgtactcaagcttatttctttacga
cattactacttcacaatgggatggaatatatttgattttgtggttgtcattctctctata
gtaggtatgttccttgctgatctgattgaaaaatactttgtatcaccaaccttgttcaga
gtaataagacttgccagaataggacgtatcctgcgtctcatcaaaggagcaaaaggcatt
cgtactttgctgtttgctttgatgatgtcactccctgctttgtttaacataggattacta
cttttccttgtgatgttcatttatgctatctttggaatgtccaactttgcctatgtcaag
aaggaaagtggcattgatgacatgtacaatttcgaaacttttggcaacagtatgatttgt
ttattcatgattacaacatcagctgggtgggatggcttgttaaatcctattctcaacagt
aaatacccagactgtgatccagctatagaacatcctggaagttccgtaaaaggggattgt
ggtaacccctctgttgggattttcttctttgtaagttatatcatcatatcctttttagtg
gtggtaaacatgtatatcgctgtaattttagagaactttggtgttgcaacagaggaaagt
gcagaacctcttggagaggatgactttgaaatgttctatgaagtctgggaaaagtttgat
tcagatgcatcacagttcattcaataccataagttgactgactttgctgatgctctagat
ccacctcttcgtatgccaaaaccaaacaatgtacagcttattgcaatggatcttcccatg
gtaagtggtgacagaattcactgccttgacatcctatttgcttttacaaagcgagtgttg
ggagaaggagacgaaatggataatctccgtcaaccaatggaggagcgttttatggcttcc
aacccttcaaaggtctcctatgaaccaatcacttctacattacgtagaaaacaagaggaa
ctgtctgctgttgtgatccagcgcgcctttcgaagttatatgttgaggaaaaccatacat
cgtgcttcctttctgtaccataatgctaaagacaaagatgcagacagtctaataacacga
aaggacgtactgagtgatcgactcaatgggaactctacaacagacaaagtagacataaca
ccctcgacaacgtctcccccatcatatgacagtgttacaaaaccagacaaagagaaacat
gaaaaagataaaacagagaaagaagacagggcaaaagatatcagggagcgtaagaagtaa
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integrated database retrieval system
