Rana temporaria (common frog): 120947086 Help Entry 120947086         CDS       T07929                                  Symbol PCDH15 Name (RefSeq) protocadherin-15 isoform X1   KO K16500   protocadherin-15 Organism rtem  Rana temporaria (common frog) Brite KEGG Orthology (KO) [BR:rtem00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:rtem03037]     120947086 (PCDH15)    04515 Cell adhesion molecules [BR:rtem04515]     120947086 (PCDH15) Cilium and associated proteins [BR:rtem03037]  Primary cilia and associated proteins   USH complex and associated proteins    120947086 (PCDH15) Cell adhesion molecules [BR:rtem04515]  Cadherins   Protocadherins    120947086 (PCDH15) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin PCDH15_12th ECD Cadherin_FAT4_N Cadherin_CELSR2_9th Rieske_2 Motif Other DBs NCBI-GeneID:  120947086 NCBI-ProteinID:  XP_040218003 LinkDB All DBs Position 8:complement(77654261..78920801) Genome browser AA seq 1933 aa AA seqDB search MIRKLWNLMTFAVIFGHCFNQAQSDGDWQFEDCELARPGPPATIVAIDEESANGTIIVDN MQITGTAGGSNPTIRLTLKENADYWVILDPVTQKLYLNSTGRVLDRDPPMSIQTFGVKIE CGNLKGGTIFHDVRVVVRDRNDNSPSFMQRSYYTTINELTPVGTTIYNGFADKGATDIDD GPNGQIEYFIQYNPNDTASQQTFDIPLTLSGAVVLRRRLNYEERTRYYVIVQANDRPLNP NERRTSTTTLTVDVLDGDDLGPRFLPCEPVPNTRDCRPINYKASLPELSPPAKVNPVNVT PPIKAEDQDRDIQPISDRPGIIFSILVGTPEDYTEYFHMNRTTAVLTLLKPVNRDLHQKF DLVIKAEQDNGHPLPAFANLHIEIMDENNQAPYFTLATYQGYILESSSVGTTISENSNLT APLKLIALDNDIEELAPDAIPTKDPQLYLYLVDYSTVFAVTSSGITRHLTLLQPVDRERQ QIYKFSIVASDGTQESTPVTVNILVIDANDNTPTFSNISYNVKIYTDMAPGENVIRLTAV DADEGTNGQIIYEILAGAQGQFVINTKSGVISISPGVTLTVGESYALTVKASDNAPPAQR RSSITTVYIEVLPPNNQSPPRFPQLMYNLEISEAMRIGANLLNLQATDREGDPITYLIQN GDPQKVFNITVSSGLLILAKTLDRESTDRYILIVTASDGRPDGTSTATVNVLVTDVNDNN PVFDLYLPRNLSVQEEEVNAFVGQVKATDPDAGVNGQVRYSLANLNNIFRITTNGSIYTS VKLDREVRDTYELTVEATDSAPADPRRSTITLTITVTDIDDNSPVFTNTSYSVSVPENML PGTVFLQVKAKDADLGANITYRIRSQEVLQLFTMNSSSGELSLLKPLDFESFTGKEAVYV FLVEAFDAAGSMPPGIATVTVRVKDMNDFSPVFSRALYWGMVAPDALKGTVIVTVSAEDY DTPGTPASYVRYKVDVAQFPYSASIFDVEEKTGRVITRVNLNEDPSTIFRLGVIAYDDGD PVKSNSTMVIITVLQPSVIPRFTQEEYRSPPLSETAPIGTTVTVVTAAALNQTIVYAIIS GNDQGAFAIDNITGVITVVKPLDYENTTSYELRIQADSMHVARYNLRATSKSNTAIVYIE ILDENDHAPQFSKKLYLGGVSEDARMFASVLKVKTTDKDTGNYSSNSYKLIIPTIKDGKE GFVIEFYSGVIKTAMLFKNMRRSYFKFEVEAKDDYGRGLSSKADVIVSVVNQLDMQVIVS NVPPTVVEENIDDLISILERYVQDQIPGAAVVVESIGARRYGDGFSEEDYTQCDLMIYAV DPQTNRAISRNELFKFLDGKVLDINKQFQDYIGLGGRILEIRTPDVVANVKKQAQAVGYT EGALLALAIIIILCCIPAILIVMVSYRQFKERQAECAKTARIQMALPAGKSSAPAANNLY EELGDSTMFHRGKKSVLQEGDRQRLISSLASRAIEAHKQSSISGCLNNNLPKSSSNITFL SDINPLTTQNPLYMEGSVQSTINIGFPWRNKLPLDKSSLQRRVLRDSVLKVNSEGLHRAW TLPTRFAKRNVYDILGSPVIMDPIQCQHMGTQAEKDTSETNQPTESLRPSLEISSNNKLS VREQARQFEQNALGDIKMTKSWEIKEIHTSDGNENCTEKNKSYINDPPYQNSLLSSATQD SPIIPAHQSTTFPSILITPSDCSEDISPPPTRKPTPPLARKSVTPSQSFLIVQNEQIIPN FIPDPPNVPPPCPPLITSPSEPFLPTQPFLLTHTPETSCPPPPPPPLPAPSLPPSFSPIL PTPPPPPLPQTLLTPSLSQVSLSSLTPTISSSTKEKLLTALEAPQANFGPRRELKGILKN IQNLADIEKSVANMYSQIDKCNPNQKQVPKPKSTVPTDTQNADILIPHEKLNGNLSCVVG ELEKRFPSQSTAL NT seq 5802 nt NT seq  +upstreamnt  +downstreamnt atgatacgaaagctctggaacttgatgacttttgcagtgatatttggacattgctttaac caagcacagagtgatggagactggcaatttgaggattgtgaactggctagacctggtcca ccagcaactatagttgctattgatgaagaaagtgcaaatggaacaatcatagtggacaat atgcaaattacagggactgctggtggatctaatccaactataagactaactttgaaagaa aatgcagactactgggtgatactggatccagttactcaaaagttatatctcaacagcact gggagagtattggatagagatcctcctatgtccattcagacctttggtgttaaaatagaa tgcgggaacttaaagggtggaacgattttccatgatgtacgagtagttgtaagagacagg aatgacaattcacccagttttatgcaaaggagttactacacaaccatcaatgagttaaca ccagttggaaccacgatttataatggatttgcggataaaggcgctacagacatagatgat ggtcctaacggccagattgaatattttatccaatacaacccaaatgacacagcctcccaa cagacctttgatattcccctcacactgtctggagcagttgtcttacggcgcaggttgaat tatgaggaaaggacacggtattatgtcatagtacaagctaatgatcgtccacttaatcct aatgaacgaaggacaagtacaactactttgacagtggatgttcttgatggtgatgacctt ggtcctcggtttcttccctgtgaacctgtgccaaatacgcgtgattgtcgaccaataaat tacaaagcaagccttccagaactcagccctcctgcaaaagtaaatcctgttaatgtcacc ccacctataaaagccgaagaccaagaccgggatattcaaccaatatctgaccgacctggc atcattttctctatccttgttggcactcccgaggattatactgaatattttcatatgaat cgtacaaccgctgtgctcacactcctgaagccagtaaatagagatttgcaccagaaattt gatttggttattaaggctgagcaagacaatggtcatccacttccagcatttgcaaacctt cacattgaaattatggatgaaaacaatcaggctccttattttactttggctacataccaa ggctacatactggagtcttcttctgttggaacaactatttctgaaaattctaacctaact gctccgctgaaattgatagctttggataatgatattgaagagctggctccagatgcaatt ccaacaaaagatccccagctctatttatatttggtagactacagcaccgtttttgcagta acctcatctggaattactcgccatctcacattgcttcaaccagttgaccgtgagcgtcag cagatttataaattctcgatagttgcttctgatggaacccaagaaagtactccagtaact gtcaacattttggttatagatgcaaatgacaacactccaacattttctaacatatcctat aatgtcaaaatctatacagatatggcaccaggagagaatgttataagactcacagctgtg gatgcagatgaaggaaccaatgggcagataatatatgaaatactagctggagctcagggg cagtttgtcatcaataccaagtccggagtcatcagtattagtccaggagtcacactgaca gttggagagtcatatgctcttacggtaaaagcatctgataatgcccctcctgctcaaaga aggagttccatcactactgtttatatcgaagtactaccaccaaacaaccagagtcctcca cgctttccacaattgatgtacaaccttgaaatcagtgaagccatgcgtataggtgctaat cttttaaatcttcaggctacagacagagaaggagaccctattacatatttaatacagaat ggagaccctcagaaagtctttaatataacagtaagctctggacttttaatcttggcaaaa actctggacagggaaagtacggaccgttatattttgatagttacagcttcagatggccgg cctgatggaacatcaactgcaactgttaatgtgctggtgacggatgtcaatgacaacaac ccagtctttgatctttacttgcctagaaatctctccgtccaagaggaagaagtgaatgct tttgtgggtcaagtcaaagccactgatcctgatgctggagtcaatggtcaagtacgttac agtctggcaaaccttaataatattttccggatcacaaccaatggaagtatttatacatct gtaaagttggatagggaagtaagagacacttatgaactcactgtggaggcaacagacagt gcacctgctgatcctcgtcggtctacaataactcttactatcacagttactgatattgat gacaacagccctgtttttacaaatacttcttattctgtgtccgtacctgaaaacatgttg ccagggacagtttttctacaagtaaaggcaaaggatgctgatcttggtgctaatattaca tatcggataagatcgcaggaagttttgcagctgtttacaatgaactcatcatcaggagag ctatctcttttaaaacctctcgactttgaatcatttacaggaaaggaggcagtatatgtc tttcttgtggaggcttttgatgctgcaggaagcatgccccctggaattgctactgtaaca gttagagtaaaggatatgaatgatttctcgcctgtgtttagtcgagcactctactgggga atggtggctccagatgccctaaagggcacagtgatagttacagtttcagctgaagattat gatactccaggtacaccagcaagttacgtcagatataaagtagatgttgcccaatttcca tacagtgccagcatatttgacgtggaagaaaaaactggtcgtgtcataacaagggtcaat cttaatgaggatcctagcaccatattcaggttgggagtcattgcttacgatgatggagat ccagtgaagtctaacagtacaatggtaataataacagttctgcagccatctgtaatccca cgattcactcaagaggaatacaggtcacctccattgagtgaaacagctccaattgggacc actgttactgtggtaacagctgcagcattaaaccagactattgtgtatgcaatcatctca gggaatgatcaaggtgcatttgccattgataatatcacaggggttatcactgttgtaaaa ccactggactatgaaaacactacaagctatgagcttagaattcaagctgattctatgcat gtggccagatataatctacgagccacctctaaaagtaacacagctatagtgtacatagaa atactggatgaaaatgaccatgctccacaattttcaaaaaagctttacctgggaggagtg tcagaagatgctagaatgtttgcatctgtgctaaaagtgaagactacagataaagacact ggaaactacagcagcaacagctataaattaattataccaaccattaaagatggtaaagaa ggttttgtgattgaattctacagtggtgtcatcaaaacagcgatgctcttcaagaacatg agacggtcttattttaaatttgaagtggaagcaaaagatgattatggaagaggtttaagc agcaaggcagatgtaattgtttctgtggttaatcagctggatatgcaagttattgtctct aatgtccctcctacagtcgtggaagaaaatatagatgatcttattagcattttagagcgt tatgttcaagaccaaattccaggtgctgcagttgtagtagaatcaattggtgccagaaga tatggagatggcttctctgaagaggactacactcagtgtgacctgatgatttacgctgtt gaccctcagacaaacagggcaatatcacgtaatgaactttttaaatttttagatggtaaa gtgcttgacatcaataaacagtttcaagactacattggccttggaggacgtatattggag attcgaaccccagatgttgtagccaatgtaaagaagcaagcccaagctgtaggctacact gaaggagctttgctagcactggctattattatcatcctctgttgtataccggctatttta attgtaatggtcagctacagacagtttaaagagaggcaagctgagtgtgcaaagacagcg aggatccagatggcattgccagcaggcaaatcatcagcccctgctgccaataatctgtat gaagagctgggtgacagcactatgttccacagggggaaaaaatctgttttacaagaaggt gatcggcagagacttataagtagtctggcatctcgtgctattgaggcccataagcaatct agtatcagtggatgtttaaacaataatcttccaaagtcttcaagtaatattacttttctt tctgatattaacccattaactactcagaaccctctgtatatggaaggttcagtccaaagt actatcaatattgggtttccatggagaaataaattacccttagacaagtcttcgctgcaa agaagggttctgagagattctgttttaaaagtgaactcggagggcttgcatcgagcctgg acccttcccacgcgttttgctaagagaaatgtttatgacattcttgggagtcctgtaatc atggatccaattcagtgtcagcatatgggtacacaggcagagaaagacacatctgaaact aatcaaccaactgaaagcctcaggccatcactggagatctcatctaataataaattaagt gtaagagaacaagcaagacaattcgaacaaaatgcattgggggacatcaaaatgaccaaa tcttgggaaattaaagaaattcatacatcagatggtaatgagaactgtacagagaaaaat aaaagttatattaatgatcccccatatcaaaattctttactttcatcagcaacacaggat tcaccaattattcctgcacatcaatcaacaacctttccttctattctaattactccttca gactgctctgaagatatctcaccaccaccaactcggaagccaacaccacctttagccaga aaaagtgtaacaccctcccagtcctttctaattgttcaaaatgaacaaataatcccaaac tttattcctgatccaccaaatgttcctcctccttgtccaccacttatcacctctccatct gaaccttttttaccaacacagccatttcttttgacacatacaccggaaacatcttgtcct ccaccaccacctccaccgcttcctgctccatcacttccaccctcattttcaccaatcctg cccactccaccacctccaccccttcctcaaacacttctaactcctagcctttcccaggtc tccttatcttcattaacacctactatttcttcaagcaccaaggaaaagcttttaacggca ctggaagccccccaagcaaattttggccctcgacgagaactgaaggggattctcaaaaat atacagaacttggcagatatagaaaaatctgtagcaaacatgtatagccagattgacaag tgtaatccaaatcaaaagcaagtacctaaaccaaaatcaactgtaccgacagacactcaa aatgcagacattttaattccacacgagaagcttaatggaaatctaagttgtgttgttggg gagttagaaaaaagatttccttctcagtccacagccctgtaa

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